FFCP PHASE1:Mm9::chrX:137908423..137908437,-: Difference between revisions
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{{FFCP|EntrezGene=94216|HGNC=|UniProt=E9Q511|association_with_transcript=79bp_to_ENSMUST00000033629_5end|description=CAGE_peak_3_at_Col4a6_5end|id=chrX:137908423..137908437,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,2.07e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!9.59e-08!26;UBERON:0000990!9.59e-08!26;UBERON:0003103!2.31e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003100,9.79e-11,11;UBERON:0004122,4.51e-09,5;UBERON:0005156,5.76e-09,26;UBERON:0000990,5.76e-09,26;UBERON:0004175,1.30e-08,9;UBERON:0000474,3.91e-08,9;UBERON:0000080,3.15e-07,4;UBERON:0005904,3.15e-07,4;UBERON:0006947,3.15e-07,4;UBERON:0002120,3.15e-07,4;UBERON:0004054,3.15e-07,4;UBERON:0004875,3.15e-07,4;UBERON:0004876,3.15e-07,4;UBERON:0005721,3.15e-07,4;UBERON:0005754,3.15e-07,4;UBERON:0007297,3.15e-07,4;UBERON:0005153,5.80e-07,17;UBERON:0003133,7.28e-07,24|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,2.8343270329458,4.83309602015838,3.69416808241138,1.39986421625363,0,0,0,0,0.514518872071894,0.286533439938757,2.57836046138721,0,0.528990979272033,0,0,0,0,0,0,5.39280198933128,6.53171119046643,0,0.405017814995072,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0,0.587943535678524,0.502666365318702,0.247194967734374,10.8449517689934,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0,0,0.162241263067758,4.58277137326423,3.73220911830279,1.51633655060205,2.10441855886474,0.130120442962704,0.689706313300419,0.900310649026746,1.20563854268572,1.56483948048054,2.3060469651273,1.49922759295566,4.39795730256327,0,0,0,0,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,1.44988040774851,0.469052119962192,0.900310307305074,1.65721314909647,0.787056926989615,0.925602677324269,0.697601834251224,0,0.467061369468678,0.493679549740441,1.14917224855367,1.21603214318784,1.46199987425332,1.3173006917463,1.74468344388483,0,0.308713837137853,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0,0.570676878337677,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,1.79763881730844,0.432276099749388,1.1948476395262,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.350679099451593,0.442655759869801,0.738050739898011,0.470996183524124,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,1.47802552133284,0,0.325929952884052,0.678980343100753,0,1.17254380209271,1.19021820443007,0.975668239288994,0.945810864637146,0.664394068946325,1.43509291791738,3.4411296090305,2.41758974612254,1.59113964439663,0,0,2.45882136509518,3.03530420935206,0.160550589987792,0.35163505977661,2.13115428989678,0,0,0,0.215423397732799,0,0,0,0,0,0,0,1.56134093729095,1.78065603667255,1.46598263418218,11.71287873105,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,3.52845436887939,0.65954501176592,0.484393280087717,0.422190474497091,0.596861720015682,0.328281799490123,1.7488850197791,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,1.21991680276109,1.72808545314882,4.39085421630384,3.71216358368502,4.18079473792944,6.28166263512553,10.7319936213452,1.16653475962614,1.86401793926078,0,0.299033092087958,0.66183396182839,0.388902376688095,0.387479470433193,0.506868376472335,0.58678619322877,1.3020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,10.0458588896739,3.75364950902364,3.47988086107804,2.35805216986972,4.01257683228291,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.565879024158229,0.37456602987953,0.128050304809739,0.459483751644906,0.952587382566147,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0|short_description=p3@Col4a6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94216 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9Q511 | |||
|association_with_transcript=79bp_to_ENSMUST00000033629_5end | |||
|cluster_id=chrX:137908423..137908437,- | |||
|description=CAGE_peak_3_at_Col4a6_5end | |||
|id=chrX:137908423..137908437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.07e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!9.59e-08!26;UBERON:0000990!9.59e-08!26;UBERON:0003103!2.31e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,9.79e-11,11;UBERON:0004122,4.51e-09,5;UBERON:0005156,5.76e-09,26;UBERON:0000990,5.76e-09,26;UBERON:0004175,1.30e-08,9;UBERON:0000474,3.91e-08,9;UBERON:0000080,3.15e-07,4;UBERON:0005904,3.15e-07,4;UBERON:0006947,3.15e-07,4;UBERON:0002120,3.15e-07,4;UBERON:0004054,3.15e-07,4;UBERON:0004875,3.15e-07,4;UBERON:0004876,3.15e-07,4;UBERON:0005721,3.15e-07,4;UBERON:0005754,3.15e-07,4;UBERON:0007297,3.15e-07,4;UBERON:0005153,5.80e-07,17;UBERON:0003133,7.28e-07,24 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,2.8343270329458,4.83309602015838,3.69416808241138,1.39986421625363,0,0,0,0,0.514518872071894,0.286533439938757,2.57836046138721,0,0.528990979272033,0,0,0,0,0,0,5.39280198933128,6.53171119046643,0,0.405017814995072,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0,0.075726193333184,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.29688427812965,0.346970653532272,0,0,0,0.587943535678524,0.502666365318702,0.247194967734374,10.8449517689934,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0.521472960576829,0,0,0.162241263067758,4.58277137326423,3.73220911830279,1.51633655060205,2.10441855886474,0.130120442962704,0.689706313300419,0.900310649026746,1.20563854268572,1.56483948048054,2.3060469651273,1.49922759295566,4.39795730256327,0,0,0,0,0.278047249225598,0,0.205782136407943,1.19420560091096,0,0,0,1.44988040774851,0.469052119962192,0.900310307305074,1.65721314909647,0.787056926989615,0.925602677324269,0.697601834251224,0,0.467061369468678,0.493679549740441,1.14917224855367,1.21603214318784,1.46199987425332,1.3173006917463,1.74468344388483,0,0.308713837137853,0,0,0.853153002140936,0.696710015581316,0.77320476793256,0.201683524623343,0,0.570676878337677,0.474529061544512,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,1.79763881730844,0.432276099749388,1.1948476395262,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.350679099451593,0.442655759869801,0.738050739898011,0.470996183524124,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,1.47802552133284,0,0.325929952884052,0.678980343100753,0,1.17254380209271,1.19021820443007,0.975668239288994,0.945810864637146,0.664394068946325,1.43509291791738,3.4411296090305,2.41758974612254,1.59113964439663,0,0,2.45882136509518,3.03530420935206,0.160550589987792,0.35163505977661,2.13115428989678,0,0,0,0.215423397732799,0,0,0,0,0,0,0,1.56134093729095,1.78065603667255,1.46598263418218,11.71287873105,0,0.242780636154981,0.302323556964751,0,0,0.307435147943927,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,3.52845436887939,0.65954501176592,0.484393280087717,0.422190474497091,0.596861720015682,0.328281799490123,1.7488850197791,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,1.21991680276109,1.72808545314882,4.39085421630384,3.71216358368502,4.18079473792944,6.28166263512553,10.7319936213452,1.16653475962614,1.86401793926078,0,0.299033092087958,0.66183396182839,0.388902376688095,0.387479470433193,0.506868376472335,0.58678619322877,1.3020438484395,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0,0,10.0458588896739,3.75364950902364,3.47988086107804,2.35805216986972,4.01257683228291,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0.565879024158229,0.37456602987953,0.128050304809739,0.459483751644906,0.952587382566147,0.463537303779422,0,0,0.294397840268795,0.342869252385415,0.532427418478012,0.476872379894642,0.145346416632329,0.282328141245992,0.0846146078916765,0,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Col4a6 | |||
}} |
Latest revision as of 15:46, 1 October 2015
Short description: | p3@Col4a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Col4a6_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENSMUST00000033629_5end |
EntrezGene: | Col4a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.07e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
female organism | 9.79e-11 | 11 |
genitourinary system | 4.51e-09 | 5 |
reproductive structure | 5.76e-09 | 26 |
reproductive system | 5.76e-09 | 26 |
internal genitalia | 1.30e-08 | 9 |
female reproductive system | 3.91e-08 | 9 |
mesonephros | 3.15e-07 | 4 |
duct of male reproductive system | 3.15e-07 | 4 |
male genital duct | 3.15e-07 | 4 |
pronephros | 3.15e-07 | 4 |
internal male genitalia | 3.15e-07 | 4 |
nephrogenic cord | 3.15e-07 | 4 |
urogenital ridge | 3.15e-07 | 4 |
pronephric mesoderm | 3.15e-07 | 4 |
rostral part of nephrogenic cord | 3.15e-07 | 4 |
presumptive pronephric mesoderm | 3.15e-07 | 4 |
epithelial bud | 5.80e-07 | 17 |
reproductive organ | 7.28e-07 | 24 |