FFCP PHASE1:Mm9::chr16:15637370..15637478,-: Difference between revisions
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{{FFCP|EntrezGene=17217|HGNC=|MCL_coexpression_id=49|UniProt=P49717,Q3UA65,Q542F4|association_with_transcript=14bp_to_ENSMUST00000023353,NM_008565,uc007yhr.2_5end|description=CAGE_peak_1_at_Mcm4_5end|id=chr16:15637370..15637478,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.50e-10!29;UBERON:0002390!2.32e-07!45;UBERON:0003061!2.32e-07!45;UBERON:0002370!5.15e-07!23;UBERON:0000974!5.15e-07!23;UBERON:0004807!5.15e-07!23;UBERON:0005058!5.15e-07!23;UBERON:0003351!5.15e-07!23;UBERON:0009113!5.15e-07!23;UBERON:0003295!5.15e-07!23;UBERON:0009722!5.15e-07!23;UBERON:0005562!5.15e-07!23;UBERON:0007690!5.15e-07!23;UBERON:0000072!7.64e-07!27;UBERON:0002193!8.69e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.50e-10,29;UBERON:0005057,2.50e-10,29;UBERON:0002390,2.32e-07,45;UBERON:0003061,2.32e-07,45;UBERON:0000077,4.24e-07,35;UBERON:0000153,4.82e-07,43;UBERON:0002370,5.15e-07,23;UBERON:0000974,5.15e-07,23;UBERON:0004807,5.15e-07,23;UBERON:0005058,5.15e-07,23;UBERON:0003351,5.15e-07,23;UBERON:0009113,5.15e-07,23;UBERON:0003295,5.15e-07,23;UBERON:0009722,5.15e-07,23;UBERON:0005562,5.15e-07,23;UBERON:0007690,5.15e-07,23;UBERON:0001048,6.01e-07,134;UBERON:0000072,7.64e-07,27;UBERON:0002193,8.69e-07,48;UBERON:0002405,8.69e-07,48|phase1_expression=29.6275367143869,5.93258192986914,4.54999239389536,2.11724947914781,2.50447864973174,26.0212871463429,21.4923629347884,45.9679031452011,45.7563346992917,47.9832278960087,22.2583358693156,30.1538761002372,46.566598541288,53.5012862804264,180.878600665905,122.902487305624,162.997917603858,41.6410058272874,32.6332351981658,40.7414065726109,15.2227489370415,101.376061176104,101.084318396768,23.0389088822506,22.2527002635155,4.59385571292016,8.61523992318149,13.3592164265251,15.2018735565099,23.9428623271934,19.7340154483221,98.4297543862428,107.021273039715,47.5445043046316,39.2838202861733,46.7119353457364,50.4298309968052,29.2972141515835,35.160090503571,35.5996145902183,24.1174910092716,29.3709558532132,30.1016418879315,24.9275699591643,24.3304634926835,24.9623582939887,21.9069576417451,27.0351193911754,9.00713349211335,18.0819806139084,37.9363202604732,34.5006154475932,29.1941734540461,55.1275227928622,68.2270412259202,29.8420945801698,22.9226751951005,15.4701627683233,27.7173551377649,29.6234948392338,29.1562445612842,17.2810711355257,23.1216646988896,7.19919773825119,10.8775299882367,12.0781619540837,13.4820049733282,16.5213871288268,50.2894619696117,41.1768111911656,48.7953910335206,13.139945282575,17.6694832761291,54.9983688475144,48.4019628642094,54.2339084099912,14.3150645299205,14.300981865541,12.7493422602682,17.1452174049252,15.6443870560121,23.962015045611,12.2840519560608,14.069065250792,14.3630352910202,34.7661730858928,35.0234334765793,23.8591290656385,29.3817630132754,60.3816765253216,33.0445517119913,6.88339101585109,2.03991400112325,5.93673510801599,5.84798775702902,8.06448396775204,21.7688851204215,96.6339929017587,81.5728054453008,85.5081770315023,18.3096445709685,76.9958864485907,99.3740434855918,92.4386714099331,66.4627495904427,57.7660493283225,77.3452400872618,13.35951392713,64.4755330281458,14.5473296283528,80.497191619487,49.627872964879,45.8924839539556,38.5849959814714,27.5157574697549,26.5156507705615,11.6181634835156,14.0261376212314,103.499434578135,58.0742991311199,86.5698752364743,91.1565475894218,20.5030937339934,19.0307518057506,11.51956887474,28.1002760729451,93.3359819901119,73.1881331811957,89.4574398594375,14.6794826616726,16.4700217014706,16.2094114225595,9.21268897019065,8.95004100656157,13.0906468072523,8.76102820565891,51.3270393805594,54.863474039051,12.8888606801174,18.5188833180097,104.486715699051,74.2583797320117,76.7064672970788,63.446728308836,60.5524842446818,56.4981506456188,43.3838984711544,9.57202471734358,144.86169125087,130.672301395963,102.755456511746,94.6925564087123,83.4141747676794,71.043441970522,50.4166234199461,87.973145933774,87.7766484141544,83.6380698122824,83.5440688223042,93.6208491860469,79.0352822136294,60.32079058944,70.5499312043926,53.5198710352938,46.1258667533261,40.9259742760718,48.2892122519315,17.1645053279739,50.1907542236115,24.132617219627,12.7278030986993,10.8187990694746,19.3204101456125,8.32079796314305,10.5144974282064,23.873870071994,7.93005079161115,28.2962106329992,122.64074405776,117.511755961382,90.5938253094316,72.0010182905333,48.9231696458715,43.3714427536635,22.302865892592,27.0106285747378,32.9249123528353,31.4351225825018,33.3388588973695,30.5598598942435,23.7751854862164,15.732160587095,86.6782307355583,100.652939609171,89.0391111817335,73.5181293521584,64.780130713987,38.1538860203333,41.1037491307672,16.2371162777562,15.5428740562961,9.00799296629144,8.59712618552732,162.673978073192,164.716437904864,172.244378086798,167.562460266903,132.165083544324,82.2441501253986,85.1580566854399,42.4794294150593,85.1140380883053,38.8174157623857,46.8897594062314,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17217 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|TSSclassifier=NA | |||
|UniProt=P49717,Q3UA65,Q542F4 | |||
|association_with_transcript=14bp_to_ENSMUST00000023353,NM_008565,uc007yhr.2_5end | |||
|cluster_id=chr16:15637370..15637478,- | |||
|description=CAGE_peak_1_at_Mcm4_5end | |||
|id=chr16:15637370..15637478,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.50e-10!29;UBERON:0002390!2.32e-07!45;UBERON:0003061!2.32e-07!45;UBERON:0002370!5.15e-07!23;UBERON:0000974!5.15e-07!23;UBERON:0004807!5.15e-07!23;UBERON:0005058!5.15e-07!23;UBERON:0003351!5.15e-07!23;UBERON:0009113!5.15e-07!23;UBERON:0003295!5.15e-07!23;UBERON:0009722!5.15e-07!23;UBERON:0005562!5.15e-07!23;UBERON:0007690!5.15e-07!23;UBERON:0000072!7.64e-07!27;UBERON:0002193!8.69e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.50e-10,29;UBERON:0005057,2.50e-10,29;UBERON:0002390,2.32e-07,45;UBERON:0003061,2.32e-07,45;UBERON:0000077,4.24e-07,35;UBERON:0000153,4.82e-07,43;UBERON:0002370,5.15e-07,23;UBERON:0000974,5.15e-07,23;UBERON:0004807,5.15e-07,23;UBERON:0005058,5.15e-07,23;UBERON:0003351,5.15e-07,23;UBERON:0009113,5.15e-07,23;UBERON:0003295,5.15e-07,23;UBERON:0009722,5.15e-07,23;UBERON:0005562,5.15e-07,23;UBERON:0007690,5.15e-07,23;UBERON:0001048,6.01e-07,134;UBERON:0000072,7.64e-07,27;UBERON:0002193,8.69e-07,48;UBERON:0002405,8.69e-07,48 | |||
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| |||
|short_description=p1@Mcm4 | |||
}} |
Latest revision as of 15:58, 1 October 2015
Short description: | p1@Mcm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mcm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:49 |
Association with transcript: | 14bp_to_ENSMUST00000023353, NM_008565, uc007yhr.2_5end |
EntrezGene: | Mcm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.50e-10 | 29 |
immune organ | 2.50e-10 | 29 |
hematopoietic system | 2.32e-07 | 45 |
blood island | 2.32e-07 | 45 |
mixed endoderm/mesoderm-derived structure | 4.24e-07 | 35 |
anterior region of body | 4.82e-07 | 43 |
thymus | 5.15e-07 | 23 |
neck | 5.15e-07 | 23 |
respiratory system epithelium | 5.15e-07 | 23 |
hemolymphoid system gland | 5.15e-07 | 23 |
pharyngeal epithelium | 5.15e-07 | 23 |
thymic region | 5.15e-07 | 23 |
pharyngeal gland | 5.15e-07 | 23 |
entire pharyngeal arch endoderm | 5.15e-07 | 23 |
thymus primordium | 5.15e-07 | 23 |
early pharyngeal endoderm | 5.15e-07 | 23 |
primordium | 6.01e-07 | 134 |
segment of respiratory tract | 7.64e-07 | 27 |
hemolymphoid system | 8.69e-07 | 48 |
immune system | 8.69e-07 | 48 |