FFCP PHASE1:Mm9::chr8:124956824..124956846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13057 | |EntrezGene=13057 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |MCL_coexpression_id=116 | ||
|TSSclassifier=NA | |||
|UniProt=Q61462,B3VQI8 | |UniProt=Q61462,B3VQI8 | ||
|association_with_transcript=0bp_to_ENSMUST00000017604,NM_007806,uc009nsp.2,uc009nsq.2_5end | |association_with_transcript=0bp_to_ENSMUST00000017604,NM_007806,uc009nsp.2,uc009nsq.2_5end | ||
|cluster_id=chr8:124956824..124956846,- | |||
|description=CAGE_peak_2_at_Cyba_5end | |description=CAGE_peak_2_at_Cyba_5end | ||
|id=chr8:124956824..124956846,- | |id=chr8:124956824..124956846,- | ||
|ontology_enrichment_celltype=CL:0000063!1.58e-08!66;CL:0000988!2.82e-07!32;CL:0002032!2.82e-07!32;CL:0000037!2.82e-07!32;CL:0000566!2.82e-07!32;CL:0000837!2.82e-07!32 | |ontology_enrichment_celltype=CL:0000063!1.58e-08!66;CL:0000988!2.82e-07!32;CL:0002032!2.82e-07!32;CL:0000037!2.82e-07!32;CL:0000566!2.82e-07!32;CL:0000837!2.82e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.38e-07,32;CL:0002032,2.38e-07,32;CL:0000037,2.38e-07,32;CL:0000837,2.38e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-11!48;UBERON:0002204!2.43e-11!32;UBERON:0002390!4.41e-10!45;UBERON:0003061!4.41e-10!45;UBERON:0001007!1.60e-09!128;UBERON:0001555!1.60e-09!128;UBERON:0007026!1.60e-09!128;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0000926!1.75e-09!193;UBERON:0004120!1.75e-09!193;UBERON:0006603!1.75e-09!193;UBERON:0005409!4.28e-09!59;UBERON:0004923!4.29e-09!24;UBERON:0003081!7.52e-09!88;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0002371!1.60e-08!16;UBERON:0000344!8.77e-08!15;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0000160!1.31e-07!43;UBERON:0002405!2.85e-07!70 | |ontology_enrichment_uberon=UBERON:0002193!1.38e-11!48;UBERON:0002204!2.43e-11!32;UBERON:0002390!4.41e-10!45;UBERON:0003061!4.41e-10!45;UBERON:0001007!1.60e-09!128;UBERON:0001555!1.60e-09!128;UBERON:0007026!1.60e-09!128;UBERON:0004119!1.64e-09!130;UBERON:0000925!1.64e-09!130;UBERON:0006595!1.64e-09!130;UBERON:0000926!1.75e-09!193;UBERON:0004120!1.75e-09!193;UBERON:0006603!1.75e-09!193;UBERON:0005409!4.28e-09!59;UBERON:0004923!4.29e-09!24;UBERON:0003081!7.52e-09!88;UBERON:0004921!1.03e-08!126;UBERON:0004185!1.03e-08!126;UBERON:0002371!1.60e-08!16;UBERON:0000344!8.77e-08!15;UBERON:0001474!1.13e-07!22;UBERON:0004765!1.13e-07!22;UBERON:0001434!1.13e-07!22;UBERON:0000160!1.31e-07!43;UBERON:0002405!2.85e-07!70 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-11,48;UBERON:0002405,1.15e-11,48;UBERON:0002204,2.42e-11,32;UBERON:0002390,3.70e-10,45;UBERON:0003061,3.70e-10,45;UBERON:0005409,3.67e-09,47;UBERON:0004923,4.28e-09,24;UBERON:0001007,5.76e-09,116;UBERON:0001555,5.76e-09,116;UBERON:0007026,5.76e-09,116;UBERON:0004119,6.04e-09,118;UBERON:0000925,6.04e-09,118;UBERON:0006595,6.04e-09,118;UBERON:0003081,1.57e-08,87;UBERON:0002371,1.60e-08,16;UBERON:0004921,3.55e-08,114;UBERON:0000160,5.91e-08,31;UBERON:0000344,8.75e-08,15;UBERON:0001474,1.13e-07,22;UBERON:0004765,1.13e-07,22;UBERON:0001434,1.13e-07,22 | |||
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| ||
|short_description=p2@Cyba | |short_description=p2@Cyba | ||
}} | }} |
Latest revision as of 16:11, 1 October 2015
Short description: | p2@Cyba |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cyba_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000017604, NM_007806, uc009nsp.2, uc009nsq.2_5end |
EntrezGene: | Cyba |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.38e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.38e-07 | 32 |
hematopoietic stem cell | 2.38e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.38e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.15e-11 | 48 |
immune system | 1.15e-11 | 48 |
musculoskeletal system | 2.42e-11 | 32 |
hematopoietic system | 3.70e-10 | 45 |
blood island | 3.70e-10 | 45 |
gastrointestinal system | 3.67e-09 | 47 |
organ component layer | 4.28e-09 | 24 |
digestive system | 5.76e-09 | 116 |
digestive tract | 5.76e-09 | 116 |
primitive gut | 5.76e-09 | 116 |
endoderm-derived structure | 6.04e-09 | 118 |
endoderm | 6.04e-09 | 118 |
presumptive endoderm | 6.04e-09 | 118 |
lateral plate mesoderm | 1.57e-08 | 87 |
bone marrow | 1.60e-08 | 16 |
subdivision of digestive tract | 3.55e-08 | 114 |
intestine | 5.91e-08 | 31 |
mucosa | 8.75e-08 | 15 |
bone element | 1.13e-07 | 22 |
skeletal element | 1.13e-07 | 22 |
skeletal system | 1.13e-07 | 22 |