FFCP PHASE1:Mm9::chr11:53583960..53584007,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:53583960..53584007,+
|short_description=p2@Irf1
|description=CAGE_peak_2_at_Irf1_5end
|association_with_transcript=0bp_to_ENSMUST00000019043,ENSMUST000001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16362 | |EntrezGene=16362 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P15314,Q5SX14,Q5SX16,Q5SX13 | |UniProt=P15314,Q5SX14,Q5SX16,Q5SX13 | ||
|association_with_transcript=0bp_to_ENSMUST00000019043,ENSMUST00000123376,ENSMUST00000138913,NM_001159396,uc007iwz.2_5end | |||
|cluster_id=chr11:53583960..53584007,+ | |||
|description=CAGE_peak_2_at_Irf1_5end | |||
|id=chr11:53583960..53584007,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.10e-17!43;UBERON:0005409!3.35e-17!59;UBERON:0001007!6.34e-16!128;UBERON:0001555!6.34e-16!128;UBERON:0007026!6.34e-16!128;UBERON:0004119!8.10e-16!130;UBERON:0000925!8.10e-16!130;UBERON:0006595!8.10e-16!130;UBERON:0004921!5.53e-15!126;UBERON:0004185!5.53e-15!126;UBERON:0000344!2.62e-09!15;UBERON:0001242!2.31e-08!13;UBERON:0000060!2.31e-08!13;UBERON:0001262!2.31e-08!13;UBERON:0004786!2.31e-08!13;UBERON:0004923!1.91e-07!24;UBERON:0002365!2.34e-07!25;UBERON:0002330!2.34e-07!25;UBERON:0009854!3.59e-07!23;UBERON:0009856!3.59e-07!23;UBERON:0002107!9.04e-07!22;UBERON:0007499!9.04e-07!22;UBERON:0006925!9.04e-07!22;UBERON:0009497!9.04e-07!22;UBERON:0000015!9.04e-07!22;UBERON:0002423!9.04e-07!22;UBERON:0006235!9.04e-07!22;UBERON:0008835!9.04e-07!22;UBERON:0003894!9.04e-07!22;UBERON:0004161!9.04e-07!22;UBERON:0008836!9.04e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.15e-17,31;UBERON:0005409,2.82e-15,47;UBERON:0001007,1.87e-12,116;UBERON:0001555,1.87e-12,116;UBERON:0007026,1.87e-12,116;UBERON:0004119,3.12e-12,118;UBERON:0000925,3.12e-12,118;UBERON:0006595,3.12e-12,118;UBERON:0004921,1.45e-11,114;UBERON:0000344,3.35e-10,15;UBERON:0001242,3.79e-09,13;UBERON:0001262,3.79e-09,13;UBERON:0004786,3.79e-09,13;UBERON:0004923,1.72e-07,24;UBERON:0009854,4.02e-07,23;UBERON:0009856,4.02e-07,23;UBERON:0002365,5.88e-07,25;UBERON:0002330,5.88e-07,25 | |||
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|phase1_expression=0.960893082628764,4.88565570695105,5.0049916332849,13.9133537201142,12.0214975187123,2.51818907867835,5.13947809310157,0.774739940649458,0.140788722151667,0.234064526321993,0,0,1.02720437958723,1.04904482902797,0.666219523631325,0.607425802169478,0,1.41957974411207,1.64537320326887,2.12194825899015,0.595303031057488,1.39007331681239,0.783599367416806,4.15980299262857,4.81759490241057,2.8711598205751,3.01533397311352,1.939241094173,8.7410772949932,5.54466285471848,3.32595765982957,0,0,0,7.51014211353314,5.81821258754723,3.67504841272264,0.418531630736908,0.7813353445238,1.57057123192139,2.94115744015507,4.78131839470912,2.42755176515577,2.26614272356039,1.72340783073175,1.65192076945513,1.56478268869608,1.09012578190223,1.31811709640683,1.1665793944457,0.979904951377538,0,1.51004345451963,0.725362142011344,0,0,0.85960031981627,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,3.1496490104849,1.97773272513395,1.4209602298922,1.79760066311043,1.15265491596466,0.207379224616955,0,0,0.285650984403804,0.441737081903227,0,0,0,2.20231761998777,0.638436690425939,0.614426133024974,0.131886287730194,0.182975287204819,0,0.279182999001381,1.68828783009504,1.06958773443767,0.294628585473668,0.854230084794618,0,0.075726193333184,0.302286240427142,4.34796733052517,6.88339101585109,0.679971333707751,5.93673510801599,3.89865850468601,3.13618820968135,2.80888840263504,1.02258193546835,0.779358013808606,0.70667914902068,0.704217098883403,1.28326477414318,7.64415719119937,0,0.865964164044856,0.506719730950197,0.505524445014783,2.8545969929765,0.776813650941515,1.92974780784272,1.73485326766136,1.21786191324856,0.922461989024234,0.60289056221049,1.64624189989987,1.38233250462643,2.96633961281249,2.02439099687876,0.884610551949874,0.808834249737046,1.32504911076236,0.969750506270444,3.72783522436244,0.292780797011547,0,5.8755122697976,0.239630249011841,1.19980546198682,1.01656181658452,1.3481157546434,0,0.125654352112864,1.04294592115366,1.02286182932132,0.41557608911912,0.486723789203273,1.32391173005411,1.49288364732112,4.0435641349388,0.631325567659422,0.390361328888111,0.459804208866946,0.360124259610698,0.90422890701429,0.544291993210623,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0.43839146485515,1.39023624612799,0.696504333044333,1.23469281844766,1.39323986772945,0,0.257347907114715,0.852490498186778,0.414251545071004,0.469052119962192,1.08037236876609,0.710234206755631,0.393528463494808,0.617068451549513,0.930135779001631,1.3413670069981,0.817357396570186,0.493679549740441,0.164167464079095,0.810688095458557,0.877199924551994,0.439100230582101,1.47627060636409,2.73376933133365,0.205809224758569,7.26921322564356,6.61126416658861,0.853153002140936,1.39342003116263,1.67527699718721,4.03367049246685,2.89091456998331,5.1360919050391,8.54152310780121,4.6115707322723,5.02670417600539,8.35617182572834,7.40863531052657,8.08937467788799,8.64552199498777,13.1433240347882,0.569003702859245,0.685491075658373,0,0.814605311381257,0.969762435838129,0.280543279561274,1.45444035385792,0.590440591918409,1.09899109488962,1.23397163921801,4.74324203339438,0.500535317148282,0.982794975566015,1.34917267430912,1.82574109249653,2.894125917029,2.80088436959562,2.87696137450811,0.648540907100142,4.3929826110093,5.75072826109418,6.32639611036456,7.17686648163489,8.5876818502018,5.9201146462231,5.78932225636041,1.47802552133284,0.189491411770485,0.488894929326078,0.339490171550376,1.17345124144251,1.50755631697634,2.14239276797412,0.585400943573396,0.945810864637146,0.8858587585951,0.956728611944923,2.13022309130459,1.72684981865896,2.16973587872267,4.52373851817817,2.71952841909355,0.983528546038072,2.75936746304733,0.481651769963376,0.35163505977661,0.983609672260053,0.504941854408746,0.94652465824877,1.56175497718655,0.646270193198397,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,1.18586333383957,0.642642632843614,2.55492153374884,1.95872164033981,1.14020871547503,2.3095817216155,0,1.45668381692989,1.51161778482376,1.50884063804718,2.95301892880773,2.76691633149535,2.84271122485043,3.27180356529755,1.78248689192361,3.79244109522979,2.10837217149998,4.12542172992747,6.80879211507576,1.08036656418786,1.55230420539305,1.92903331528433,2.48276327099183,1.07021290561242,1.31639216481697,2.13125464380219,0.704015124191131,1.48282449604674,3.30792597082443,1.15420377059036,0.322928853391811,0.663442174209714,0.477489376012546,0.984845398470368,5.82961673259701,0,1.53783792718067,0.619160603889667,1.29636169158798,1.50694765603753,1.0935538217682,0.915112692826091,1.01987057996313,1.11961161858926,0.690999869022119,3.81868247206045,0.632671987162271,0.813277868507395,1.08005340821801,2.29997125615916,1.31017538247707,1.34864346384821,2.47960367176008,2.87931536182433,10.4988128366352,7.45607175704311,0,0.897099276263873,0.165458490457098,0.777804753376191,0.774958940866387,1.35164900392623,1.17357238645754,1.8228613878153,0.943734099831398,0,0,1.26404448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| ||
|short_description=p2@Irf1 | |||
}} | }} |
Latest revision as of 16:40, 1 October 2015
Short description: | p2@Irf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Irf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000019043, ENSMUST00000123376, ENSMUST00000138913, NM_001159396, uc007iwz.2_5end |
EntrezGene: | Irf1 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.15e-17 | 31 |
gastrointestinal system | 2.82e-15 | 47 |
digestive system | 1.87e-12 | 116 |
digestive tract | 1.87e-12 | 116 |
primitive gut | 1.87e-12 | 116 |
endoderm-derived structure | 3.12e-12 | 118 |
endoderm | 3.12e-12 | 118 |
presumptive endoderm | 3.12e-12 | 118 |
subdivision of digestive tract | 1.45e-11 | 114 |
mucosa | 3.35e-10 | 15 |
intestinal mucosa | 3.79e-09 | 13 |
wall of intestine | 3.79e-09 | 13 |
gastrointestinal system mucosa | 3.79e-09 | 13 |
organ component layer | 1.72e-07 | 24 |
digestive tract diverticulum | 4.02e-07 | 23 |
sac | 4.02e-07 | 23 |
exocrine gland | 5.88e-07 | 25 |
exocrine system | 5.88e-07 | 25 |