FFCP PHASE1:Mm9::chr5:115885009..115885038,+: Difference between revisions
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|id=chr5:115885009..115885038,+
|short_description=p11@Msi1
|description=CAGE_peak_11_at_Msi1_5end
|association_with_transcript=4bp_to_ENSMUST00000136586_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17690 | |EntrezGene=17690 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENSMUST00000136586_5end | |||
|cluster_id=chr5:115885009..115885038,+ | |||
|description=CAGE_peak_11_at_Msi1_5end | |||
|id=chr5:115885009..115885038,+ | |||
|ontology_enrichment_celltype=CL:0002609!7.26e-07!6 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!3.30e-25!9;UBERON:0000019!3.30e-25!9;UBERON:0000047!3.30e-25!9;UBERON:0004088!3.30e-25!9;UBERON:0002104!3.30e-25!9;UBERON:0001456!3.30e-25!9;UBERON:0003072!3.30e-25!9;UBERON:0003071!3.30e-25!9;UBERON:0004128!3.30e-25!9;UBERON:0001444!2.71e-20!11;UBERON:0000020!1.89e-18!12;UBERON:0001032!1.89e-18!12;UBERON:0004456!1.89e-18!12;UBERON:0005085!6.86e-17!13;UBERON:0003056!6.23e-14!49;UBERON:0000033!6.35e-10!63;UBERON:0002346!1.58e-09!71;UBERON:0003075!1.58e-09!71;UBERON:0007284!1.58e-09!71;UBERON:0004121!4.86e-07!102;UBERON:0000924!4.86e-07!102;UBERON:0006601!4.86e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.66e-59,9;UBERON:0000019,2.66e-59,9;UBERON:0000047,2.66e-59,9;UBERON:0010312,2.66e-59,9;UBERON:0004088,2.66e-59,9;UBERON:0002104,2.66e-59,9;UBERON:0001456,2.66e-59,9;UBERON:0003072,2.66e-59,9;UBERON:0004128,2.66e-59,9;UBERON:0003071,2.66e-59,9;UBERON:0001444,1.39e-48,11;UBERON:0000020,1.46e-44,12;UBERON:0001032,1.46e-44,12;UBERON:0004456,1.46e-44,12;UBERON:0000033,3.71e-41,13;UBERON:0005085,3.71e-41,13;UBERON:0007811,5.87e-15,36;UBERON:0000153,1.59e-12,43;UBERON:0003056,5.45e-11,49;UBERON:0002346,2.14e-08,64;UBERON:0003075,2.14e-08,64;UBERON:0007284,2.14e-08,64;UBERON:0010371,2.40e-07,73;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,1.05220927943237,0.520481771850815,0.919608417733892,2.52086981727489,4.21973489940002,9.5251098811859,12.811372028485,20.8017828522598,12.6764651662118,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0,0,0.548783918618318,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0.207379224616955,0.405017814995072,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,1.05220927943237,0.520481771850815,0.919608417733892,2.52086981727489,4.21973489940002,9.5251098811859,12.811372028485,20.8017828522598,12.6764651662118,0.431135985865684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0,0.38581844092741,0,0,0,0,0,0,0,0,0.548783918618318,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p11@Msi1 | |||
}} | }} |
Latest revision as of 17:26, 1 October 2015
Short description: | p11@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 4bp_to_ENSMUST00000136586_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.66e-59 | 9 |
camera-type eye | 2.66e-59 | 9 |
simple eye | 2.66e-59 | 9 |
immature eye | 2.66e-59 | 9 |
ocular region | 2.66e-59 | 9 |
visual system | 2.66e-59 | 9 |
face | 2.66e-59 | 9 |
optic cup | 2.66e-59 | 9 |
optic vesicle | 2.66e-59 | 9 |
eye primordium | 2.66e-59 | 9 |
subdivision of head | 1.39e-48 | 11 |
sense organ | 1.46e-44 | 12 |
sensory system | 1.46e-44 | 12 |
entire sense organ system | 1.46e-44 | 12 |
head | 3.71e-41 | 13 |
ectodermal placode | 3.71e-41 | 13 |
craniocervical region | 5.87e-15 | 36 |
anterior region of body | 1.59e-12 | 43 |
pre-chordal neural plate | 5.45e-11 | 49 |
neurectoderm | 2.14e-08 | 64 |
neural plate | 2.14e-08 | 64 |
presumptive neural plate | 2.14e-08 | 64 |
ecto-epithelium | 2.40e-07 | 73 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |