FFCP PHASE1:Mm9::chr1:88007464..88007480,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70247 | |EntrezGene=70247 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=31 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=72bp_to_ENSMUST00000152184_5end | |association_with_transcript=72bp_to_ENSMUST00000152184_5end | ||
|cluster_id=chr1:88007464..88007480,+ | |||
|description=CAGE_peak_3_at_Psmd1_5end | |description=CAGE_peak_3_at_Psmd1_5end | ||
|id=chr1:88007464..88007480,+ | |id=chr1:88007464..88007480,+ | ||
|ontology_enrichment_celltype=CL:0000107!1.77e-10!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,7.03e-10,2;CL:0000217,7.78e-10,2;CL:0000328,7.78e-10,2;CL:0002573,7.78e-10,2;CL:0002376,7.78e-10,2;CL:0000218,7.78e-10,2;CL:0000692,7.78e-10,2;CL:0002377,7.78e-10,2;CL:0002375,7.78e-10,2;CL:0000107,2.29e-08,9;CL:0000215,7.85e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.67e-13!11;UBERON:0002410!1.77e-10!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003975,2.88e-15,5;UBERON:0005631,4.07e-15,3;UBERON:0000478,4.07e-15,3;UBERON:0000158,4.07e-15,3;UBERON:0010313,1.17e-14,3;UBERON:0002342,1.17e-14,3;UBERON:0002005,1.17e-14,3;UBERON:0005428,1.17e-14,3;UBERON:0005062,1.17e-14,3;UBERON:0000010,1.91e-14,11;UBERON:0005795,1.57e-11,4;UBERON:0000995,1.57e-11,4;UBERON:0001987,1.07e-10,2;UBERON:0003124,1.07e-10,2;UBERON:0004340,1.07e-10,2;UBERON:0003134,1.35e-09,8;UBERON:0004175,1.53e-08,9;UBERON:0000474,1.53e-08,9;UBERON:0002410,2.29e-08,9;UBERON:0003100,5.31e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,0.85960031981627,0.515672092277442,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,2.57469057332826,1.36028808192214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,1.03909497345377,0,0,0,0,0,0,13.3485282576562,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.17562273527484,0,0,0,0,0,0,5.04813151066011,7.80877488593277,5.60100834105277,0.477937595905104,0.222798674082394,0,0.404810701674894,1.46127928955656,0.790575555893047,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1817668934791,84.0973321329366,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.578574190077352,2.09404753587224,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0.19318959403219,43.9176992555766,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,1.28629718017973,0.85960031981627,0.515672092277442,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0,0,2.57469057332826,1.36028808192214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0,1.03909497345377,0,0,0,0,0,0,13.3485282576562,0,0,0.161766849947409,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.528901133327089,0,0,0.128867461322093,0,0,0.190225626112559,0.474529061544512,0,0.754005626400808,0.198956472041151,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0.252946148497029,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,2.17562273527484,0,0,0,0,0,0,5.04813151066011,7.80877488593277,5.60100834105277,0.477937595905104,0.222798674082394,0,0.404810701674894,1.46127928955656,0.790575555893047,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,20.1817668934791,84.0973321329366,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.578574190077352,2.09404753587224,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0.167884616364078,0.19318959403219,43.9176992555766,0,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p3@Psmd1 | |short_description=p3@Psmd1 | ||
}} | }} |
Latest revision as of 17:28, 1 October 2015
Short description: | p3@Psmd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Psmd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | 72bp_to_ENSMUST00000152184_5end |
EntrezGene: | Psmd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 7.03e-10 | 2 |
insulating cell | 7.78e-10 | 2 |
myelin accumulating cell | 7.78e-10 | 2 |
Schwann cell | 7.78e-10 | 2 |
non-myelinating Schwann cell | 7.78e-10 | 2 |
myelinating Schwann cell;;Schwann cell | 7.78e-10 | 2 |
terminal Schwann cell | 7.78e-10 | 2 |
immature Schwann cell | 7.78e-10 | 2 |
Schwann cell precursor | 7.78e-10 | 2 |
autonomic neuron | 2.29e-08 | 9 |
barrier cell | 7.85e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
internal female genitalia | 2.88e-15 | 5 |
extraembryonic membrane | 4.07e-15 | 3 |
extraembryonic structure | 4.07e-15 | 3 |
membranous layer | 4.07e-15 | 3 |
neural crest-derived structure | 1.17e-14 | 3 |
neural crest | 1.17e-14 | 3 |
enteric nervous system | 1.17e-14 | 3 |
vagal neural crest | 1.17e-14 | 3 |
neural fold | 1.17e-14 | 3 |
peripheral nervous system | 1.91e-14 | 11 |
embryonic uterus | 1.57e-11 | 4 |
uterus | 1.57e-11 | 4 |
placenta | 1.07e-10 | 2 |
chorion | 1.07e-10 | 2 |
allantois | 1.07e-10 | 2 |
female reproductive organ | 1.35e-09 | 8 |
internal genitalia | 1.53e-08 | 9 |
female reproductive system | 1.53e-08 | 9 |
autonomic nervous system | 2.29e-08 | 9 |
female organism | 5.31e-07 | 11 |