FFCP PHASE1:Mm9::chr16:20364179..20364209,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27416 | |EntrezGene=27416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_ENSMUST00000137985_5end | |association_with_transcript=63bp_to_ENSMUST00000137985_5end | ||
|cluster_id=chr16:20364179..20364209,- | |||
|description=CAGE_peak_6_at_Abcc5_5end | |description=CAGE_peak_6_at_Abcc5_5end | ||
|id=chr16:20364179..20364209,- | |id=chr16:20364179..20364209,- | ||
|ontology_enrichment_celltype=CL:0002563!7.27e-16!9;CL:0002251!7.27e-16!9;CL:0000239!4.75e-13!6;CL:0000677!4.75e-13!6;CL:0000212!4.75e-13!6;CL:0000584!4.75e-13!6;CL:0000075!3.89e-11!7;CL:0000066!1.21e-10!25;CL:0000473!2.18e-10!3;CL:0000627!2.18e-10!3;CL:0000682!2.18e-10!3;CL:0002076!4.02e-09!15 | |ontology_enrichment_celltype=CL:0002563!7.27e-16!9;CL:0002251!7.27e-16!9;CL:0000239!4.75e-13!6;CL:0000677!4.75e-13!6;CL:0000212!4.75e-13!6;CL:0000584!4.75e-13!6;CL:0000075!3.89e-11!7;CL:0000066!1.21e-10!25;CL:0000473!2.18e-10!3;CL:0000627!2.18e-10!3;CL:0000682!2.18e-10!3;CL:0002076!4.02e-09!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.70e-27,3;CL:0000239,1.64e-23,6;CL:0000677,1.64e-23,6;CL:0000584,1.64e-23,6;CL:0000075,3.18e-20,7;CL:0000066,6.87e-17,25;CL:0002563,7.89e-16,9;CL:0002251,7.89e-16,9;CL:0000473,5.73e-12,7;CL:0002076,1.21e-09,15;CL:0000223,2.63e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.18e-23!15;UBERON:0001242!2.42e-17!13;UBERON:0000060!2.42e-17!13;UBERON:0001262!2.42e-17!13;UBERON:0004786!2.42e-17!13;UBERON:0004923!5.84e-16!24;UBERON:0003350!7.27e-16!9;UBERON:0004808!7.27e-16!9;UBERON:0001277!7.27e-16!9;UBERON:0000485!8.42e-13!11;UBERON:0005409!1.45e-09!59;UBERON:0000160!5.08e-09!43;UBERON:0001962!1.06e-07!2;UBERON:0001961!1.06e-07!2;UBERON:0001744!1.06e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!8.18e-23!15;UBERON:0001242!2.42e-17!13;UBERON:0000060!2.42e-17!13;UBERON:0001262!2.42e-17!13;UBERON:0004786!2.42e-17!13;UBERON:0004923!5.84e-16!24;UBERON:0003350!7.27e-16!9;UBERON:0004808!7.27e-16!9;UBERON:0001277!7.27e-16!9;UBERON:0000485!8.42e-13!11;UBERON:0005409!1.45e-09!59;UBERON:0000160!5.08e-09!43;UBERON:0001962!1.06e-07!2;UBERON:0001961!1.06e-07!2;UBERON:0001744!1.06e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.04e-21,15;UBERON:0001962,3.08e-19,2;UBERON:0001961,3.08e-19,2;UBERON:0001744,3.08e-19,2;UBERON:0003350,7.89e-16,9;UBERON:0004808,7.89e-16,9;UBERON:0001277,7.89e-16,9;UBERON:0004923,3.44e-13,24;UBERON:0002465,3.66e-13,3;UBERON:0000485,5.03e-13,11;UBERON:0001242,4.46e-11,13;UBERON:0001262,4.46e-11,13;UBERON:0004786,4.46e-11,13;UBERON:0003199,2.01e-10,1 | |||
|phase1_expression=0,16.40184415905,16.3799726180233,0.30246421130683,0,4.19698179779725,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.998863419011,21.564472420314,17.2269589234506,12.0613358924541,9.69620547086501,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0.523511883968059,0.777689839750757,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,16.40184415905,16.3799726180233,0.30246421130683,0,4.19698179779725,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.998863419011,21.564472420314,17.2269589234506,12.0613358924541,9.69620547086501,0.190023419456374,0,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0,0,0.523511883968059,0.777689839750757,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Abcc5 | |short_description=p6@Abcc5 | ||
}} | }} |
Latest revision as of 17:45, 1 October 2015
Short description: | p6@Abcc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Abcc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 63bp_to_ENSMUST00000137985_5end |
EntrezGene: | Abcc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.70e-27 | 3 |
brush border epithelial cell | 1.64e-23 | 6 |
gut absorptive cell | 1.64e-23 | 6 |
enterocyte | 1.64e-23 | 6 |
columnar/cuboidal epithelial cell | 3.18e-20 | 7 |
epithelial cell | 6.87e-17 | 25 |
intestinal epithelial cell | 7.89e-16 | 9 |
epithelial cell of alimentary canal | 7.89e-16 | 9 |
defensive cell | 5.73e-12 | 7 |
endo-epithelial cell | 1.21e-09 | 15 |
endodermal cell | 2.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.04e-21 | 15 |
gut-associated lymphoid tissue | 3.08e-19 | 2 |
mucosa-associated lymphoid tissue | 3.08e-19 | 2 |
lymphoid tissue | 3.08e-19 | 2 |
epithelium of mucosa | 7.89e-16 | 9 |
gastrointestinal system epithelium | 7.89e-16 | 9 |
intestinal epithelium | 7.89e-16 | 9 |
organ component layer | 3.44e-13 | 24 |
lymphoid system | 3.66e-13 | 3 |
simple columnar epithelium | 5.03e-13 | 11 |
intestinal mucosa | 4.46e-11 | 13 |
wall of intestine | 4.46e-11 | 13 |
gastrointestinal system mucosa | 4.46e-11 | 13 |
egg chamber | 2.01e-10 | 1 |