FFCP PHASE1:Mm9::chr5:116102983..116103001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75665 | |EntrezGene=75665 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1358 | |||
|TSSclassifier=NA | |||
|UniProt=D3YTR9,D6RJL4 | |UniProt=D3YTR9,D6RJL4 | ||
|association_with_transcript=0bp_to_ENSMUST00000118576,ENSMUST00000121746,ENSMUST00000141976,uc008zek.1_5end | |association_with_transcript=0bp_to_ENSMUST00000118576,ENSMUST00000121746,ENSMUST00000141976,uc008zek.1_5end | ||
|cluster_id=chr5:116102983..116103001,- | |||
|description=CAGE_peak_1_at_Ccdc64_5end | |description=CAGE_peak_1_at_Ccdc64_5end | ||
|id=chr5:116102983..116103001,- | |id=chr5:116102983..116103001,- | ||
|ontology_enrichment_celltype=CL:0000055!7.16e-13!50;CL:0000221!1.77e-09!44;CL:0000133!1.77e-09!44;CL:0002319!2.04e-09!43;CL:0000393!6.27e-09!39;CL:0000211!6.27e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.51e-09,44;CL:0000133,1.51e-09,44;CL:0002319,1.75e-09,43;CL:0000393,5.43e-09,39;CL:0000211,5.43e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.54e-17!73;UBERON:0005743!1.54e-17!73;UBERON:0000073!9.64e-17!75;UBERON:0001016!9.64e-17!75;UBERON:0002346!6.10e-16!71;UBERON:0003075!6.10e-16!71;UBERON:0007284!6.10e-16!71;UBERON:0000025!7.03e-15!114;UBERON:0001049!7.89e-15!52;UBERON:0005068!7.89e-15!52;UBERON:0006241!7.89e-15!52;UBERON:0007135!7.89e-15!52;UBERON:0004121!4.92e-14!102;UBERON:0000924!4.92e-14!102;UBERON:0006601!4.92e-14!102;UBERON:0004111!8.47e-14!122;UBERON:0000033!1.71e-12!63;UBERON:0002616!4.25e-12!49;UBERON:0000955!4.36e-12!50;UBERON:0006238!4.36e-12!50;UBERON:0003056!3.35e-10!49;UBERON:0003080!1.01e-09!40;UBERON:0002780!2.35e-09!39;UBERON:0001890!2.35e-09!39;UBERON:0006240!2.35e-09!39;UBERON:0002020!5.32e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-17,73;UBERON:0010314,3.16e-17,92;UBERON:0001016,7.15e-17,75;UBERON:0002346,1.29e-15,64;UBERON:0003075,1.29e-15,64;UBERON:0007284,1.29e-15,64;UBERON:0000025,5.25e-15,114;UBERON:0001049,6.08e-15,52;UBERON:0005068,6.08e-15,52;UBERON:0006241,6.08e-15,52;UBERON:0007135,6.08e-15,52;UBERON:0000073,1.22e-14,54;UBERON:0004111,7.49e-14,122;UBERON:0004121,4.54e-13,95;UBERON:0000924,4.54e-13,95;UBERON:0006601,4.54e-13,95;UBERON:0010371,1.60e-12,73;UBERON:0002616,5.49e-12,46;UBERON:0000955,5.71e-12,47;UBERON:0006238,5.71e-12,47;UBERON:0003056,2.82e-10,49;UBERON:0003080,8.65e-10,40;UBERON:0002780,2.02e-09,39;UBERON:0001890,2.02e-09,39;UBERON:0006240,2.02e-09,39;UBERON:0002020,4.68e-08,34 | |||
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| ||
|short_description=p1@Ccdc64 | |short_description=p1@Ccdc64 | ||
}} | }} |
Latest revision as of 17:48, 1 October 2015
Short description: | p1@Ccdc64 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc64_5end |
Coexpression cluster: | MCL_coexpression_mm9:1358 |
Association with transcript: | 0bp_to_ENSMUST00000118576, ENSMUST00000121746, ENSMUST00000141976, uc008zek.1_5end |
EntrezGene: | Ccdc64 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.51e-09 | 44 |
neurectodermal cell | 1.51e-09 | 44 |
neural cell | 1.75e-09 | 43 |
electrically responsive cell | 5.43e-09 | 39 |
electrically active cell | 5.43e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.12e-17 | 73 |
structure with developmental contribution from neural crest | 3.16e-17 | 92 |
nervous system | 7.15e-17 | 75 |
neurectoderm | 1.29e-15 | 64 |
neural plate | 1.29e-15 | 64 |
presumptive neural plate | 1.29e-15 | 64 |
tube | 5.25e-15 | 114 |
neural tube | 6.08e-15 | 52 |
neural rod | 6.08e-15 | 52 |
future spinal cord | 6.08e-15 | 52 |
neural keel | 6.08e-15 | 52 |
regional part of nervous system | 1.22e-14 | 54 |
anatomical conduit | 7.49e-14 | 122 |
ectoderm-derived structure | 4.54e-13 | 95 |
ectoderm | 4.54e-13 | 95 |
presumptive ectoderm | 4.54e-13 | 95 |
ecto-epithelium | 1.60e-12 | 73 |
regional part of brain | 5.49e-12 | 46 |
brain | 5.71e-12 | 47 |
future brain | 5.71e-12 | 47 |
pre-chordal neural plate | 2.82e-10 | 49 |
anterior neural tube | 8.65e-10 | 40 |
regional part of forebrain | 2.02e-09 | 39 |
forebrain | 2.02e-09 | 39 |
future forebrain | 2.02e-09 | 39 |
gray matter | 4.68e-08 | 34 |