FFCP PHASE1:Mm9::chr5:117769350..117769361,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231668 | |EntrezGene=231668 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=424 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENSMUST00000128524_5end | |association_with_transcript=-8bp_to_ENSMUST00000128524_5end | ||
|cluster_id=chr5:117769350..117769361,+ | |||
|description=CAGE_peak_4_at_Vsig10_5end | |description=CAGE_peak_4_at_Vsig10_5end | ||
|id=chr5:117769350..117769361,+ | |id=chr5:117769350..117769361,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.05e-07!9;CL:0002251!2.05e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-21,9;CL:0002251,2.43e-21,9;CL:0000066,5.61e-19,25;CL:0002076,1.25e-17,15;CL:0000239,4.48e-15,6;CL:0000677,4.48e-15,6;CL:0000584,4.48e-15,6;CL:0000223,5.00e-15,20;CL:0000075,8.18e-13,7;CL:0000682,1.28e-08,3;CL:0002250,7.67e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.98e-15!43;UBERON:0005409!2.50e-13!59;UBERON:0000344!7.49e-11!15;UBERON:0001242!1.87e-09!13;UBERON:0000060!1.87e-09!13;UBERON:0001262!1.87e-09!13;UBERON:0004786!1.87e-09!13;UBERON:0003350!2.05e-07!9;UBERON:0004808!2.05e-07!9;UBERON:0001277!2.05e-07!9;UBERON:0004923!2.18e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.34e-31,15;UBERON:0001242,2.24e-26,13;UBERON:0001262,2.24e-26,13;UBERON:0004786,2.24e-26,13;UBERON:0000160,7.13e-23,31;UBERON:0003350,2.43e-21,9;UBERON:0004808,2.43e-21,9;UBERON:0001277,2.43e-21,9;UBERON:0004923,3.66e-18,24;UBERON:0000485,3.85e-17,11;UBERON:0005409,2.14e-15,47;UBERON:0000331,5.69e-09,3;UBERON:0002116,5.69e-09,3;UBERON:0001204,5.69e-09,3;UBERON:0001168,5.69e-09,3;UBERON:0001007,1.05e-08,116;UBERON:0001555,1.05e-08,116;UBERON:0007026,1.05e-08,116;UBERON:0004119,1.86e-08,118;UBERON:0000925,1.86e-08,118;UBERON:0006595,1.86e-08,118;UBERON:0004921,4.28e-07,114;UBERON:0002108,8.53e-07,4 | |||
|phase1_expression=0.480446541314382,2.44282785347553,3.63999391511629,3.93203474698879,3.00537437967808,5.20425742926858,3.73780224952841,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,3.03985603307473,5.96464130774642,3.44539178469012,5.1691439539089,4.52489588640367,8.17100703662408,8.31699428207772,3.99114919179548,0,0,0,2.59966457776147,1.99481574430191,3.06254034393554,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.608261587317087,0.550640256485045,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.37863096666592,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.91347103775248,0.517875767294343,0,0.693941307064543,0,0.461230994512117,0.904335843315735,0.470354828542819,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0.162241263067758,0.611036183101898,0,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0,0,0.340182495756639,0.512454881139399,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0.330418782983798,2.64450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.380451252225118,3.32170343081158,0.823494773620054,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,1.94524244887225,2.98711909881551,0.379335801906163,0.228497025219458,0,0.610953983535943,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,1.01847051465113,0.938760993154008,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.99358059645788,0.712262414669021,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,1.47650946440386,0,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,0.340439605753788,0.36012218806262,0.646793418913773,0,0.177340233642274,1.07021290561242,0.164549020602121,0.608929898229199,0.23467170806371,0.42366414172764,0,1.15420377059036,0.484393280087717,0.120625849856312,0.238744688006273,0.328281799490123,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0.158167996790568,0.203319467126849,0.540026704109006,0.836353184057875,0.655087691238533,0.539457385539283,0.330613822901344,0,3.6292192521702,0,0,0.747582730219894,1.48912641411388,0.777804753376191,1.16243841129958,1.01373675294467,1.64300134104056,1.17183946359555,0.943734099831398,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0.671538465456314,0.579568782096571,0.563047426353546,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.287177344778066,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.480446541314382,2.44282785347553,3.63999391511629,3.93203474698879,3.00537437967808,5.20425742926858,3.73780224952841,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.340173160604279,0,0,3.03985603307473,5.96464130774642,3.44539178469012,5.1691439539089,4.52489588640367,8.17100703662408,8.31699428207772,3.99114919179548,0,0,0,2.59966457776147,1.99481574430191,3.06254034393554,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.608261587317087,0.550640256485045,0,0.218025156380447,0,0,0.419959264876088,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0.37863096666592,0,1.44932244350839,0.860423876981386,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.91347103775248,0.517875767294343,0,0.693941307064543,0,0.461230994512117,0.904335843315735,0.470354828542819,0.251333182659351,0.247194967734374,0.144599356919912,0,0.323533699894818,0.220841518460394,0,11.1835056730873,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0.162241263067758,0.611036183101898,0,0.252722758433675,0.420883711772948,0.390361328888111,0.229902104433473,0,0,0.340182495756639,0.512454881139399,0.0937017245597288,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.61734640922383,0.398068533636986,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0.16455984991348,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0.330418782983798,2.64450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0.80673409849337,0.22237804384487,0.380451252225118,3.32170343081158,0.823494773620054,0.502670417600539,0.795825888164603,0.38992817423824,0.898819408654221,1.94524244887225,2.98711909881551,0.379335801906163,0.228497025219458,0,0.610953983535943,0.193952487167626,0.350679099451593,0.126473074248515,0.295220295959204,0,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0.325929952884052,1.01847051465113,0.938760993154008,0.502518772325447,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0.327869890753351,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0.99358059645788,0.712262414669021,0.162886959353576,0.494910368917606,0,0.485561272309963,0.302323556964751,0.188605079755898,1.47650946440386,0,0.258428293168221,0.727067458955011,0.356497378384721,0.632073515871632,0,1.03135543248187,0.340439605753788,0.36012218806262,0.646793418913773,0,0.177340233642274,1.07021290561242,0.164549020602121,0.608929898229199,0.23467170806371,0.42366414172764,0,1.15420377059036,0.484393280087717,0.120625849856312,0.238744688006273,0.328281799490123,0.582961673259701,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0.158167996790568,0.203319467126849,0.540026704109006,0.836353184057875,0.655087691238533,0.539457385539283,0.330613822901344,0,3.6292192521702,0,0,0.747582730219894,1.48912641411388,0.777804753376191,1.16243841129958,1.01373675294467,1.64300134104056,1.17183946359555,0.943734099831398,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0.671538465456314,0.579568782096571,0.563047426353546,0.73260649706906,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.888986911206461,0.206035057238894,0.320919209591815,0,0.50695859978048,0.377252682772152,0.468207537349412,0.320125762024346,0.287177344778066,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.441596760403192,0,0.354951612318675,0,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p4@Vsig10 | |short_description=p4@Vsig10 | ||
}} | }} |
Latest revision as of 18:13, 1 October 2015
Short description: | p4@Vsig10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Vsig10_5end |
Coexpression cluster: | MCL_coexpression_mm9:424 |
Association with transcript: | -8bp_to_ENSMUST00000128524_5end |
EntrezGene: | Vsig10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.43e-21 | 9 |
epithelial cell of alimentary canal | 2.43e-21 | 9 |
epithelial cell | 5.61e-19 | 25 |
endo-epithelial cell | 1.25e-17 | 15 |
brush border epithelial cell | 4.48e-15 | 6 |
gut absorptive cell | 4.48e-15 | 6 |
enterocyte | 4.48e-15 | 6 |
endodermal cell | 5.00e-15 | 20 |
columnar/cuboidal epithelial cell | 8.18e-13 | 7 |
M cell of gut | 1.28e-08 | 3 |
intestinal crypt stem cell | 7.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.34e-31 | 15 |
intestinal mucosa | 2.24e-26 | 13 |
wall of intestine | 2.24e-26 | 13 |
gastrointestinal system mucosa | 2.24e-26 | 13 |
intestine | 7.13e-23 | 31 |
epithelium of mucosa | 2.43e-21 | 9 |
gastrointestinal system epithelium | 2.43e-21 | 9 |
intestinal epithelium | 2.43e-21 | 9 |
organ component layer | 3.66e-18 | 24 |
simple columnar epithelium | 3.85e-17 | 11 |
gastrointestinal system | 2.14e-15 | 47 |
ileal mucosa | 5.69e-09 | 3 |
ileum | 5.69e-09 | 3 |
mucosa of small intestine | 5.69e-09 | 3 |
wall of small intestine | 5.69e-09 | 3 |
digestive system | 1.05e-08 | 116 |
digestive tract | 1.05e-08 | 116 |
primitive gut | 1.05e-08 | 116 |
endoderm-derived structure | 1.86e-08 | 118 |
endoderm | 1.86e-08 | 118 |
presumptive endoderm | 1.86e-08 | 118 |
subdivision of digestive tract | 4.28e-07 | 114 |
small intestine | 8.53e-07 | 4 |