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FFCP PHASE1:Mm9::chr1:89470480..89470509,-: Difference between revisions

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{{FFCP|EntrezGene=53972|HGNC=|MCL_coexpression_id=162|UniProt=E9QK62,Q8CHT1|association_with_transcript=-35bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end|description=CAGE_peak_3_at_Ngef_5end|id=chr1:89470480..89470509,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.93e-23!128;UBERON:0001555!3.93e-23!128;UBERON:0007026!3.93e-23!128;UBERON:0004119!9.24e-23!130;UBERON:0000925!9.24e-23!130;UBERON:0006595!9.24e-23!130;UBERON:0004921!1.10e-22!126;UBERON:0004185!1.10e-22!126;UBERON:0005177!1.29e-18!85;UBERON:0000466!2.00e-17!79;UBERON:0009569!2.51e-15!66;UBERON:0009854!6.31e-15!23;UBERON:0009856!6.31e-15!23;UBERON:0002100!2.76e-14!98;UBERON:0002107!2.99e-14!22;UBERON:0007499!2.99e-14!22;UBERON:0006925!2.99e-14!22;UBERON:0009497!2.99e-14!22;UBERON:0000015!2.99e-14!22;UBERON:0002423!2.99e-14!22;UBERON:0006235!2.99e-14!22;UBERON:0008835!2.99e-14!22;UBERON:0003894!2.99e-14!22;UBERON:0004161!2.99e-14!22;UBERON:0008836!2.99e-14!22;UBERON:0000077!1.25e-13!97;UBERON:0005409!3.33e-13!59;UBERON:0000160!5.87e-13!43;UBERON:0001041!6.21e-13!92;UBERON:0002365!9.33e-13!25;UBERON:0002330!9.33e-13!25;UBERON:0003104!7.18e-11!131;UBERON:0009142!7.18e-11!131;UBERON:0005172!4.90e-10!49;UBERON:0005173!4.90e-10!49;UBERON:0002417!4.90e-10!49;UBERON:0000916!4.90e-10!49;UBERON:0002108!3.40e-08!16;UBERON:0001045!6.69e-08!13;UBERON:0005911!1.24e-07!69;UBERON:0001264!2.93e-07!12;UBERON:0003922!2.93e-07!12;UBERON:0002114!2.93e-07!12;UBERON:0003923!2.93e-07!12;UBERON:0003924!2.93e-07!12;UBERON:0003921!2.93e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-23,79;UBERON:0002100,9.80e-20,90;UBERON:0009854,1.84e-18,23;UBERON:0009856,1.84e-18,23;UBERON:0004921,2.57e-18,114;UBERON:0001007,1.15e-17,116;UBERON:0001555,1.15e-17,116;UBERON:0007026,1.15e-17,116;UBERON:0002107,1.51e-17,22;UBERON:0007499,1.51e-17,22;UBERON:0006925,1.51e-17,22;UBERON:0009497,1.51e-17,22;UBERON:0000015,1.51e-17,22;UBERON:0002423,1.51e-17,22;UBERON:0006235,1.51e-17,22;UBERON:0008835,1.51e-17,22;UBERON:0003894,1.51e-17,22;UBERON:0004161,1.51e-17,22;UBERON:0008836,1.51e-17,22;UBERON:0004119,4.88e-17,118;UBERON:0000925,4.88e-17,118;UBERON:0006595,4.88e-17,118;UBERON:0002365,3.25e-16,25;UBERON:0002330,3.25e-16,25;UBERON:0009569,3.04e-15,66;UBERON:0005172,1.40e-10,49;UBERON:0005173,1.40e-10,49;UBERON:0002417,1.40e-10,49;UBERON:0000916,1.40e-10,49;UBERON:0001041,1.73e-10,80;UBERON:0005911,6.22e-10,69;UBERON:0001264,2.49e-09,12;UBERON:0003104,3.78e-08,61;UBERON:0009142,3.78e-08,61;UBERON:0005256,7.30e-08,45;UBERON:0005409,2.33e-07,47|phase1_expression=0,1.39590163055744,0.454999239389536,2.41971369045464,1.50268718983904,1.51091344720701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.430942465371778,2.09025761402011,0.504060259519861,0.886922042621219,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,2.58127163094416,2.03991400112325,1.07940638327563,12.9955283489534,23.7454250161588,3.7919993435573,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,6.16592950482924,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.509196819251581,1.8661045591514,1.0108910337347,1.68353484709179,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,1.32225283331772,0,0,1.03093969057675,1.00841762311671,1.33426826306922,2.28270751335071,0,0.494096864172033,2.5133520880027,2.18852119245266,2.33956904542944,0,3.45820879799511,2.78797782556114,0,0.114248512609729,0,1.22190796707189,1.35766741017338,0.98190147846446,3.98390183882821,8.70899873079653,9.57692239832386,8.51440431060424,9.78293669387591,0.83422552858047,1.57247196090562,1.34917267430912,2.02860121388503,1.4470629585145,2.5462585178142,2.01387296215567,3.56697498905078,3.56929837144506,4.31304619582064,4.09355042435354,6.24075346229121,6.81962970457202,7.53469136792031,8.68398338454061,4.0645701836653,0,0.162964976442026,0.339490171550376,1.87752198630802,2.1775813467436,5.2369600994923,1.17080188714679,1.57635144106191,1.10732344824387,1.11618338060241,3.27726629431476,2.07221978239075,3.7608755231193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,0.35613120733451,0.977321756121456,3.95928295134085,1.32745138339963,2.91336763385978,3.02323556964751,2.82907619633847,2.36241514304618,1.53717573971964,2.06742634534577,5.08947221268508,5.34746067577082,2.21225730555071,1.05418608574999,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.361877549568935,0.835606408021955,0.492422699235184,1.45740418314925,0,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,1.62008011232702,2.71814784818809,1.09181281873089,1.07891477107857,1.40510874733071,2.09404753587224,4.40690909192096,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,7.13193406714492,5.49454872801795,2.78678892802786,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,1.04806581313991,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.01078884705519,1.77435509923168,1.13175804831646,0.749132059759059,0.640251524048693,0.689225627467359,0,0.579421629724277,1.92909220463705,0.824171801606613,1.03039244094078,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,1.03520318456864,0.338458431566706,0.365855945745545,0.526139422875686,0.950628796921032,0,0.237270036248348,0.788035859004508,1.63692417267876,0.464810523557898,1.54325288784913,0,0.935726433781634,0.644613162144895,0,0,0|short_description=p3@Ngef}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53972
|HGNC=
|MCL_coexpression_id=162
|TSSclassifier=NA
|UniProt=E9QK62,Q8CHT1
|association_with_transcript=-35bp_to_ENSMUST00000068681,NM_001111314,uc007bwy.2_5end
|cluster_id=chr1:89470480..89470509,-
|description=CAGE_peak_3_at_Ngef_5end
|id=chr1:89470480..89470509,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001007!3.93e-23!128;UBERON:0001555!3.93e-23!128;UBERON:0007026!3.93e-23!128;UBERON:0004119!9.24e-23!130;UBERON:0000925!9.24e-23!130;UBERON:0006595!9.24e-23!130;UBERON:0004921!1.10e-22!126;UBERON:0004185!1.10e-22!126;UBERON:0005177!1.29e-18!85;UBERON:0000466!2.00e-17!79;UBERON:0009569!2.51e-15!66;UBERON:0009854!6.31e-15!23;UBERON:0009856!6.31e-15!23;UBERON:0002100!2.76e-14!98;UBERON:0002107!2.99e-14!22;UBERON:0007499!2.99e-14!22;UBERON:0006925!2.99e-14!22;UBERON:0009497!2.99e-14!22;UBERON:0000015!2.99e-14!22;UBERON:0002423!2.99e-14!22;UBERON:0006235!2.99e-14!22;UBERON:0008835!2.99e-14!22;UBERON:0003894!2.99e-14!22;UBERON:0004161!2.99e-14!22;UBERON:0008836!2.99e-14!22;UBERON:0000077!1.25e-13!97;UBERON:0005409!3.33e-13!59;UBERON:0000160!5.87e-13!43;UBERON:0001041!6.21e-13!92;UBERON:0002365!9.33e-13!25;UBERON:0002330!9.33e-13!25;UBERON:0003104!7.18e-11!131;UBERON:0009142!7.18e-11!131;UBERON:0005172!4.90e-10!49;UBERON:0005173!4.90e-10!49;UBERON:0002417!4.90e-10!49;UBERON:0000916!4.90e-10!49;UBERON:0002108!3.40e-08!16;UBERON:0001045!6.69e-08!13;UBERON:0005911!1.24e-07!69;UBERON:0001264!2.93e-07!12;UBERON:0003922!2.93e-07!12;UBERON:0002114!2.93e-07!12;UBERON:0003923!2.93e-07!12;UBERON:0003924!2.93e-07!12;UBERON:0003921!2.93e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.20e-23,79;UBERON:0002100,9.80e-20,90;UBERON:0009854,1.84e-18,23;UBERON:0009856,1.84e-18,23;UBERON:0004921,2.57e-18,114;UBERON:0001007,1.15e-17,116;UBERON:0001555,1.15e-17,116;UBERON:0007026,1.15e-17,116;UBERON:0002107,1.51e-17,22;UBERON:0007499,1.51e-17,22;UBERON:0006925,1.51e-17,22;UBERON:0009497,1.51e-17,22;UBERON:0000015,1.51e-17,22;UBERON:0002423,1.51e-17,22;UBERON:0006235,1.51e-17,22;UBERON:0008835,1.51e-17,22;UBERON:0003894,1.51e-17,22;UBERON:0004161,1.51e-17,22;UBERON:0008836,1.51e-17,22;UBERON:0004119,4.88e-17,118;UBERON:0000925,4.88e-17,118;UBERON:0006595,4.88e-17,118;UBERON:0002365,3.25e-16,25;UBERON:0002330,3.25e-16,25;UBERON:0009569,3.04e-15,66;UBERON:0005172,1.40e-10,49;UBERON:0005173,1.40e-10,49;UBERON:0002417,1.40e-10,49;UBERON:0000916,1.40e-10,49;UBERON:0001041,1.73e-10,80;UBERON:0005911,6.22e-10,69;UBERON:0001264,2.49e-09,12;UBERON:0003104,3.78e-08,61;UBERON:0009142,3.78e-08,61;UBERON:0005256,7.30e-08,45;UBERON:0005409,2.33e-07,47
|phase1_expression=0,1.39590163055744,0.454999239389536,2.41971369045464,1.50268718983904,1.51091344720701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0.47997726838022,0.68822784320151,0.57423196411502,0.430761996159075,0.430942465371778,2.09025761402011,0.504060259519861,0.886922042621219,0,0,0,1.1554064790051,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92769630792852,2.58127163094416,2.03991400112325,1.07940638327563,12.9955283489534,23.7454250161588,3.7919993435573,0,0,0,0,0,0,0,1.29894624606728,0.760079596425296,0.505524445014783,6.16592950482924,0,0,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.509196819251581,1.8661045591514,1.0108910337347,1.68353484709179,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,1.32225283331772,0,0,1.03093969057675,1.00841762311671,1.33426826306922,2.28270751335071,0,0.494096864172033,2.5133520880027,2.18852119245266,2.33956904542944,0,3.45820879799511,2.78797782556114,0,0.114248512609729,0,1.22190796707189,1.35766741017338,0.98190147846446,3.98390183882821,8.70899873079653,9.57692239832386,8.51440431060424,9.78293669387591,0.83422552858047,1.57247196090562,1.34917267430912,2.02860121388503,1.4470629585145,2.5462585178142,2.01387296215567,3.56697498905078,3.56929837144506,4.31304619582064,4.09355042435354,6.24075346229121,6.81962970457202,7.53469136792031,8.68398338454061,4.0645701836653,0,0.162964976442026,0.339490171550376,1.87752198630802,2.1775813467436,5.2369600994923,1.17080188714679,1.57635144106191,1.10732344824387,1.11618338060241,3.27726629431476,2.07221978239075,3.7608755231193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98716119291576,0.35613120733451,0.977321756121456,3.95928295134085,1.32745138339963,2.91336763385978,3.02323556964751,2.82907619633847,2.36241514304618,1.53717573971964,2.06742634534577,5.08947221268508,5.34746067577082,2.21225730555071,1.05418608574999,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.361877549568935,0.835606408021955,0.492422699235184,1.45740418314925,0,0,0.619160603889667,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,1.62008011232702,2.71814784818809,1.09181281873089,1.07891477107857,1.40510874733071,2.09404753587224,4.40690909192096,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,1.15913756419314,7.13193406714492,5.49454872801795,2.78678892802786,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,1.04806581313991,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,1.01078884705519,1.77435509923168,1.13175804831646,0.749132059759059,0.640251524048693,0.689225627467359,0,0.579421629724277,1.92909220463705,0.824171801606613,1.03039244094078,0.685738504770831,0.532427418478012,0.476872379894642,0.290692833264657,1.03520318456864,0.338458431566706,0.365855945745545,0.526139422875686,0.950628796921032,0,0.237270036248348,0.788035859004508,1.63692417267876,0.464810523557898,1.54325288784913,0,0.935726433781634,0.644613162144895,0,0,0
|short_description=p3@Ngef
}}

Latest revision as of 18:17, 1 October 2015

Short description:p3@Ngef
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ngef_5end
Coexpression cluster:MCL_coexpression_mm9:162
Association with transcript: -35bp_to_ENSMUST00000068681, NM_001111314, uc007bwy.2_5end
EntrezGene:Ngef
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ngef

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D53.98
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H18.51
liver, adult pregnant day01.CNhs10466.508-5B29.78
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I65.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.20e-2379
trunk9.80e-2090
digestive tract diverticulum1.84e-1823
sac1.84e-1823
subdivision of digestive tract2.57e-18114
digestive system1.15e-17116
digestive tract1.15e-17116
primitive gut1.15e-17116
liver1.51e-1722
epithelial sac1.51e-1722
digestive gland1.51e-1722
epithelium of foregut-midgut junction1.51e-1722
anatomical boundary1.51e-1722
hepatobiliary system1.51e-1722
foregut-midgut junction1.51e-1722
hepatic diverticulum1.51e-1722
liver primordium1.51e-1722
septum transversum1.51e-1722
liver bud1.51e-1722
endoderm-derived structure4.88e-17118
endoderm4.88e-17118
presumptive endoderm4.88e-17118
exocrine gland3.25e-1625
exocrine system3.25e-1625
subdivision of trunk3.04e-1566
abdomen element1.40e-1049
abdominal segment element1.40e-1049
abdominal segment of trunk1.40e-1049
abdomen1.40e-1049
foregut1.73e-1080
endo-epithelium6.22e-1069
pancreas2.49e-0912
mesenchyme3.78e-0861
entire embryonic mesenchyme3.78e-0861
trunk mesenchyme7.30e-0845
gastrointestinal system2.33e-0747
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