FFCP PHASE1:Mm9::chr11:58234605..58234620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=69864 | |EntrezGene=69864 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=104 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NC41,Q9D8K1 | |UniProt=Q5NC41,Q9D8K1 | ||
|association_with_transcript=0bp_to_ENSMUST00000013797,NM_027239,uc007jbl.1_5end | |||
|cluster_id=chr11:58234605..58234620,+ | |||
|description=CAGE_peak_1_at_1810065E05Rik_5end | |||
|id=chr11:58234605..58234620,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.62e-11!9;CL:0002251!3.62e-11!9;CL:0000239!6.14e-08!6;CL:0000677!6.14e-08!6;CL:0000212!6.14e-08!6;CL:0000584!6.14e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.92e-15,9;CL:0002251,4.92e-15,9;CL:0000239,2.17e-09,6;CL:0000677,2.17e-09,6;CL:0000584,2.17e-09,6;CL:0000066,7.43e-09,25;CL:0002076,1.64e-08,15;CL:0000075,5.26e-08,7;CL:0000682,2.35e-07,3;CL:0002250,2.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.49e-19!59;UBERON:0000344!1.38e-18!15;UBERON:0000160!2.57e-16!43;UBERON:0001242!4.17e-16!13;UBERON:0000060!4.17e-16!13;UBERON:0001262!4.17e-16!13;UBERON:0004786!4.17e-16!13;UBERON:0003350!3.62e-11!9;UBERON:0004808!3.62e-11!9;UBERON:0001277!3.62e-11!9;UBERON:0001007!1.86e-10!128;UBERON:0001555!1.86e-10!128;UBERON:0007026!1.86e-10!128;UBERON:0004119!4.24e-10!130;UBERON:0000925!4.24e-10!130;UBERON:0006595!4.24e-10!130;UBERON:0004923!7.10e-10!24;UBERON:0004921!3.44e-09!126;UBERON:0004185!3.44e-09!126;UBERON:0000485!1.01e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.45e-40,31;UBERON:0005409,4.00e-38,47;UBERON:0000344,4.28e-28,15;UBERON:0001242,1.06e-23,13;UBERON:0001262,1.06e-23,13;UBERON:0004786,1.06e-23,13;UBERON:0004923,2.29e-16,24;UBERON:0001007,4.78e-15,116;UBERON:0001555,4.78e-15,116;UBERON:0007026,4.78e-15,116;UBERON:0003350,4.92e-15,9;UBERON:0004808,4.92e-15,9;UBERON:0001277,4.92e-15,9;UBERON:0004119,1.13e-14,118;UBERON:0000925,1.13e-14,118;UBERON:0006595,1.13e-14,118;UBERON:0004921,6.35e-13,114;UBERON:0000485,4.55e-12,11;UBERON:0002108,3.72e-10,4;UBERON:0000331,2.14e-08,3;UBERON:0002116,2.14e-08,3;UBERON:0001204,2.14e-08,3;UBERON:0001168,2.14e-08,3 | |||
|phase1_expression=0,3.83872948403297,3.63999391511629,3.0246421130683,9.5170188689806,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,5.59973479776923,6.65286915094793,2.29692785646008,4.73838195774982,3.01659725760245,113.063934576542,51.4141464710259,4.21287970245079,0,0,0,1.44425809875637,5.31950865147176,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47733238513832,0,0,0,0,0,0,0,0,0,0,13.5878816865681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3109.01457711828,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.30418782983798,1.58670339998127,0,0,0,0,0,0.570676878337677,8.54152310780121,2.63518327558417,73.1385457608784,110.022929038756,181.121636933663,15.2799299471218,496.901376661922,476.744208170955,0,0,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.7488850197791,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0,0.324016022465404,0.627264888043406,0.87345025498471,4.5853877770839,2.39695021603474,3.92633912976044,5101.25650384509,0,0,0.598066184175915,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.604957110821043,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | |phase1_expression=0,3.83872948403297,3.63999391511629,3.0246421130683,9.5170188689806,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,5.59973479776923,6.65286915094793,2.29692785646008,4.73838195774982,3.01659725760245,113.063934576542,51.4141464710259,4.21287970245079,0,0,0,1.44425809875637,5.31950865147176,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47733238513832,0,0,0,0,0,0,0,0,0,0,13.5878816865681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3109.01457711828,0,0,11.240110429178,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,3.30418782983798,1.58670339998127,0,0,0,0,0,0.570676878337677,8.54152310780121,2.63518327558417,73.1385457608784,110.022929038756,181.121636933663,15.2799299471218,496.901376661922,476.744208170955,0,0,0,0,0,0,0,0,0,0.123397163921801,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.7488850197791,0,0,0,0,0,0,0,0,0,0,9.54670618015114,0,0,0.324016022465404,0.627264888043406,0.87345025498471,4.5853877770839,2.39695021603474,3.92633912976044,5101.25650384509,0,0,0.598066184175915,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.604957110821043,0.487289403698762,0.192423683280659,0,0,0,0,0,0,0,1.46521299413812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0.145346416632329,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.382576664137687,0,0 | ||
|short_description=p1@1810065E05Rik | |||
}} | }} |
Latest revision as of 18:48, 1 October 2015
Short description: | p1@1810065E05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1810065E05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:104 |
Association with transcript: | 0bp_to_ENSMUST00000013797, NM_027239, uc007jbl.1_5end |
EntrezGene: | 1810065E05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.92e-15 | 9 |
epithelial cell of alimentary canal | 4.92e-15 | 9 |
brush border epithelial cell | 2.17e-09 | 6 |
gut absorptive cell | 2.17e-09 | 6 |
enterocyte | 2.17e-09 | 6 |
epithelial cell | 7.43e-09 | 25 |
endo-epithelial cell | 1.64e-08 | 15 |
columnar/cuboidal epithelial cell | 5.26e-08 | 7 |
M cell of gut | 2.35e-07 | 3 |
intestinal crypt stem cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.45e-40 | 31 |
gastrointestinal system | 4.00e-38 | 47 |
mucosa | 4.28e-28 | 15 |
intestinal mucosa | 1.06e-23 | 13 |
wall of intestine | 1.06e-23 | 13 |
gastrointestinal system mucosa | 1.06e-23 | 13 |
organ component layer | 2.29e-16 | 24 |
digestive system | 4.78e-15 | 116 |
digestive tract | 4.78e-15 | 116 |
primitive gut | 4.78e-15 | 116 |
epithelium of mucosa | 4.92e-15 | 9 |
gastrointestinal system epithelium | 4.92e-15 | 9 |
intestinal epithelium | 4.92e-15 | 9 |
endoderm-derived structure | 1.13e-14 | 118 |
endoderm | 1.13e-14 | 118 |
presumptive endoderm | 1.13e-14 | 118 |
subdivision of digestive tract | 6.35e-13 | 114 |
simple columnar epithelium | 4.55e-12 | 11 |
small intestine | 3.72e-10 | 4 |
ileal mucosa | 2.14e-08 | 3 |
ileum | 2.14e-08 | 3 |
mucosa of small intestine | 2.14e-08 | 3 |
wall of small intestine | 2.14e-08 | 3 |