FFCP PHASE1:Mm9::chr8:18978191..18978201,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=360217 | |EntrezGene=360217 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |MCL_coexpression_id=9 | ||
|TSSclassifier=NA | |||
|UniProt=Q70KL2 | |UniProt=Q70KL2 | ||
|association_with_transcript=54bp_to_ENSMUST00000066258_5end | |association_with_transcript=54bp_to_ENSMUST00000066258_5end | ||
|cluster_id=chr8:18978191..18978201,- | |||
|description=CAGE_peak_2_at_Defb40_5end | |description=CAGE_peak_2_at_Defb40_5end | ||
|id=chr8:18978191..18978201,- | |id=chr8:18978191..18978201,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.92e-18!15;UBERON:0003101!2.61e-17!16;UBERON:0000079!2.61e-17!16;UBERON:0001301!1.04e-15!3;UBERON:0006555!1.04e-15!3;UBERON:0005103!1.04e-15!3;UBERON:0000083!1.04e-15!3;UBERON:0009201!1.04e-15!3;UBERON:0004819!1.04e-15!3;UBERON:0006553!1.04e-15!3;UBERON:0003074!1.04e-15!3;UBERON:0003060!1.04e-15!3;UBERON:0000473!8.00e-13!14;UBERON:0000080!4.91e-12!4;UBERON:0005904!4.91e-12!4;UBERON:0006947!4.91e-12!4;UBERON:0002120!4.91e-12!4;UBERON:0004054!4.91e-12!4;UBERON:0004875!4.91e-12!4;UBERON:0004876!4.91e-12!4;UBERON:0005721!4.91e-12!4;UBERON:0005754!4.91e-12!4;UBERON:0007297!4.91e-12!4;UBERON:0003133!1.24e-11!24;UBERON:0005156!9.36e-11!26;UBERON:0000990!9.36e-11!26;UBERON:0004176!1.23e-10!17;UBERON:0009196!1.23e-10!17;UBERON:0009117!1.23e-10!17;UBERON:0000991!4.53e-10!18;UBERON:0005564!4.53e-10!18;UBERON:0000058!2.45e-08!6;UBERON:0003886!2.06e-07!38;UBERON:0002553!3.17e-07!39 | |ontology_enrichment_uberon=UBERON:0003135!1.92e-18!15;UBERON:0003101!2.61e-17!16;UBERON:0000079!2.61e-17!16;UBERON:0001301!1.04e-15!3;UBERON:0006555!1.04e-15!3;UBERON:0005103!1.04e-15!3;UBERON:0000083!1.04e-15!3;UBERON:0009201!1.04e-15!3;UBERON:0004819!1.04e-15!3;UBERON:0006553!1.04e-15!3;UBERON:0003074!1.04e-15!3;UBERON:0003060!1.04e-15!3;UBERON:0000473!8.00e-13!14;UBERON:0000080!4.91e-12!4;UBERON:0005904!4.91e-12!4;UBERON:0006947!4.91e-12!4;UBERON:0002120!4.91e-12!4;UBERON:0004054!4.91e-12!4;UBERON:0004875!4.91e-12!4;UBERON:0004876!4.91e-12!4;UBERON:0005721!4.91e-12!4;UBERON:0005754!4.91e-12!4;UBERON:0007297!4.91e-12!4;UBERON:0003133!1.24e-11!24;UBERON:0005156!9.36e-11!26;UBERON:0000990!9.36e-11!26;UBERON:0004176!1.23e-10!17;UBERON:0009196!1.23e-10!17;UBERON:0009117!1.23e-10!17;UBERON:0000991!4.53e-10!18;UBERON:0005564!4.53e-10!18;UBERON:0000058!2.45e-08!6;UBERON:0003886!2.06e-07!38;UBERON:0002553!3.17e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,8.02e-16,3;UBERON:0006555,8.02e-16,3;UBERON:0005103,8.02e-16,3;UBERON:0000083,8.02e-16,3;UBERON:0009201,8.02e-16,3;UBERON:0004819,8.02e-16,3;UBERON:0006553,8.02e-16,3;UBERON:0003074,8.02e-16,3;UBERON:0003060,8.02e-16,3;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0000058,1.41e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,18.7014841240919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,18.7014841240919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Defb40 | |short_description=p2@Defb40 | ||
}} | }} |
Latest revision as of 19:47, 1 October 2015
Short description: | p2@Defb40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Defb40_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 54bp_to_ENSMUST00000066258_5end |
EntrezGene: | Defb40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 8.02e-16 | 3 |
excretory tube | 8.02e-16 | 3 |
mesonephric epithelium | 8.02e-16 | 3 |
mesonephric tubule | 8.02e-16 | 3 |
nephric duct | 8.02e-16 | 3 |
kidney epithelium | 8.02e-16 | 3 |
renal duct | 8.02e-16 | 3 |
mesonephric duct | 8.02e-16 | 3 |
pronephric duct | 8.02e-16 | 3 |
mesonephros | 3.12e-12 | 4 |
duct of male reproductive system | 3.12e-12 | 4 |
male genital duct | 3.12e-12 | 4 |
pronephros | 3.12e-12 | 4 |
internal male genitalia | 3.12e-12 | 4 |
nephrogenic cord | 3.12e-12 | 4 |
urogenital ridge | 3.12e-12 | 4 |
pronephric mesoderm | 3.12e-12 | 4 |
rostral part of nephrogenic cord | 3.12e-12 | 4 |
presumptive pronephric mesoderm | 3.12e-12 | 4 |
duct | 1.41e-07 | 7 |