Personal tools

FFCP PHASE1:Mm9::chr5:122841899..122841937,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56378
|EntrezGene=56378
|HGNC=
|HGNC=
|MCL_coexpression_id=116
|TSSclassifier=NA
|UniProt=Q9JM76
|UniProt=Q9JM76
|association_with_transcript=0bp_to_ENSMUST00000148913,NM_019824,uc008zlf.1_5end
|association_with_transcript=0bp_to_ENSMUST00000148913,NM_019824,uc008zlf.1_5end
|cluster_id=chr5:122841899..122841937,+
|description=CAGE_peak_1_at_Arpc3_5end
|description=CAGE_peak_1_at_Arpc3_5end
|id=chr5:122841899..122841937,+
|id=chr5:122841899..122841937,+
|ontology_enrichment_celltype=CL:0000144!2.71e-24!121;CL:0000012!2.71e-24!121;CL:0002371!6.71e-23!118;CL:0000548!7.76e-21!115;CL:0000004!7.76e-21!115;CL:0000255!7.76e-21!115;CL:0000034!1.56e-17!97;CL:0000723!5.09e-16!91;CL:0000048!5.09e-16!91;CL:0000219!6.45e-13!54;CL:0000063!7.33e-12!66;CL:0002320!5.57e-10!46;CL:0000134!5.57e-10!46;CL:0002321!5.76e-09!70;CL:0000220!5.76e-09!70;CL:0000055!3.88e-08!50;CL:0000988!2.15e-07!32;CL:0002032!2.15e-07!32;CL:0000037!2.15e-07!32;CL:0000566!2.15e-07!32;CL:0000837!2.15e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000034,1.56e-17,97;CL:0000723,5.09e-16,91;CL:0000048,5.09e-16,91;CL:0000219,6.45e-13,54;CL:0002320,5.57e-10,46;CL:0000134,5.57e-10,46;CL:0002321,5.76e-09,70;CL:0000988,2.15e-07,32;CL:0002032,2.15e-07,32;CL:0000037,2.15e-07,32;CL:0000837,2.15e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002204!2.66e-10!32;UBERON:0002371!3.31e-10!16;UBERON:0002193!4.73e-10!48;UBERON:0002384!5.57e-10!46;UBERON:0002390!3.53e-09!45;UBERON:0003061!3.53e-09!45;UBERON:0000064!1.19e-08!99;UBERON:0001474!8.99e-08!22;UBERON:0004765!8.99e-08!22;UBERON:0001434!8.99e-08!22;UBERON:0002405!4.90e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.66e-10,32;UBERON:0002371,3.31e-10,16;UBERON:0002193,4.73e-10,48;UBERON:0002405,4.73e-10,48;UBERON:0002384,5.57e-10,46;UBERON:0002390,3.53e-09,45;UBERON:0003061,3.53e-09,45;UBERON:0001474,8.99e-08,22;UBERON:0004765,8.99e-08,22;UBERON:0001434,8.99e-08,22;UBERON:0011216,9.69e-08,194
|phase1_expression=126.677738059892,268.362088474669,252.069578621803,131.571931918471,148.766031794065,203.973315372946,243.657984141133,193.039368545157,209.352829839528,181.634072425867,167.793608860995,128.11408734651,208.69368978614,173.879180411386,279.812199925157,250.461905761215,307.807226376385,303.947796322662,308.644590046518,365.823879849902,105.623766367629,252.000434147847,309.782949918777,314.705095634631,345.490377287158,316.976044191491,339.009690977192,304.245380552475,341.472084763104,314.281571810634,410.644905733624,76.2036808151557,81.1885519611633,95.0890086092632,167.245087835988,187.512679964379,160.27294466596,1258.10608199514,1367.33685291665,1270.06860288043,1386.4616172891,1310.76428563526,1312.33448424321,182.802179700538,184.911522544395,239.161418066671,290.267188753123,269.479093286232,262.305302184959,265.591242135471,231.117582103474,307.630487741039,338.920864236627,257.503560414027,264.169726125977,298.420945801699,327.794255289938,338.79656462628,197.258549338108,217.415292480806,274.448997718176,295.133587432214,277.459976386675,961.992797773815,1013.58802163115,863.233339659512,477.562576166337,313.90635544771,165.177552407405,211.419299427428,214.110810655707,176.817959345954,207.616428494517,212.766518236375,189.774032616108,273.927198409786,140.948327679218,147.989624840733,144.082928194356,209.039766052357,185.628428869289,202.63530114658,148.246172469733,140.69065250792,123.460984203663,149.082064249676,156.466477198214,152.661146130921,232.630865919541,226.790251880463,202.905142091174,204.78088272157,162.513148756152,166.228583024448,151.397905265307,144.712684532439,129.06842210108,142.309319352678,239.782482248448,208.11700938659,142.815227653554,168.107685412756,89.181833897326,106.660005473,439.693304293776,436.032328482645,454.46647606829,134.85116194821,162.354053046777,136.269883661509,133.410216283158,147.665756981388,142.7509928015,158.409495220806,133.580771306161,113.099932196708,228.408150186561,87.0488128657868,297.229145455158,100.942514367183,139.130156630048,169.221463344193,247.901042420102,87.2486775094411,69.5363066620671,245.238773000248,408.090314067164,458.325686478963,453.259499969622,100.659309680041,123.982663363848,148.900407253744,178.865225477852,149.082111623583,120.101489755426,139.203003712136,109.57915550294,190.840292915883,201.672761230072,118.899648575858,90.6939487450045,125.066744811809,117.220446503282,116.645529004843,79.1264485129943,87.5016709545524,97.0749866438791,79.6806381876168,112.310924318011,81.6938266324979,92.1983890619092,120.776848567594,107.326238201081,101.689632624473,131.906349437492,86.380871799226,374.981842025267,449.844141636522,375.095819202182,112.883546031849,111.634404551002,127.483939514399,97.3020863255214,114.320018645242,117.243005794407,123.940592551967,113.479648792039,119.567710583982,98.5713500981748,132.154808583672,100.768530265499,99.2697914618006,127.119516753518,121.054189721855,186.106604479253,159.296339963132,265.987120301957,230.600894130611,91.5006594796154,101.719662274872,103.609438902963,130.489240431303,156.998898954478,168.73013036184,206.420141771863,203.238510129429,171.661947610584,166.725523570484,152.266952040033,212.121380442396,219.16398257294,195.755871609043,139.974910903374,109.45007508012,91.2932658951951,125.652869280559,111.91058509572,102.047617940414,126.473074248515,121.925982231151,136.431894494155,140.672766870853,127.474629647474,146.323157713014,152.922898198072,176.06703399734,158.839475047198,157.247508158576,172.636327507803,168.014544271273,152.893518848858,133.16228539622,93.4493342427805,130.993613579313,115.765976725502,113.155337320306,118.402292924462,115.304001605845,182.351398694439,112.557898591668,96.8011960065634,126.799579074066,135.181583014177,134.507524725778,179.008817946282,135.813018909028,146.127778586439,149.267200823274,120.228895567745,158.455825330119,172.857666847761,155.06379079938,823.320410308427,1007.31332643225,124.908125346835,140.175867122804,108.37164824176,102.911860827954,125.082363322403,84.0728187590562,185.834341236175,209.275166942998,190.434283595794,183.050099231655,178.907335288162,192.208964405617,193.904326102274,186.459237347417,218.594141204428,100.573572040026,116.248929785572,122.865266530406,93.8228885876598,139.729694157738,100.886305138372,116.534705354391,123.348011241618,128.628664393523,117.234851473667,134.964029947384,109.315168010158,91.6104998283314,94.1153078935664,86.9101084323494,106.472794660749,110.35503127556,99.4083648801061,107.316412042661,116.293456720696,114.027302636807,105.694779250795,104.345758297211,125.880000760623,126.048488933444,227.631556821799,239.582072146981,211.486733734708,93.4905054178192,119.645140181666,120.444911081527,133.338908251503,119.98699771364,192.377352175701,105.136146239959,252.376290938428,139.930296479065,216.307207967823,230.374622916737,231.97010444258,207.730581271523,250.208248950955,254.43174032441,251.523952324051,378.049564733985,92.8446141160632,97.5933442208874,144.619151360392,166.225195331503,181.896015600566,163.590452164788,140.924142011698,191.343593590326,244.842684548197,152.849471019384,67.6431526421028,81.1874845018805,94.6422565414598,74.6692563241143,92.9950729039664,95.6291670277804,85.9054986886919,71.6124116641726,89.5498801395571,73.6831568519318,52.1334311326736,208.251328493969,159.95019486394,163.310421892075,171.235644684734,169.538280797105,173.051460014482,180.653760628513,184.464219441047,200.317436697125,186.70667630475,201.04741316286,220.35226835258,183.86082937467,200.443887241391,134.677847867436,166.489465030549,181.939701204017,203.308270416899,139.289697297209,238.919791249355,182.968472642998,206.008012294982,148.966914898503,242.843292325339,256.861481971005,262.959040668683,304.867545477702,213.06066364867,218.308836345623,232.882762579973,206.247111076693,246.509470487407,188.464753477662,116.345616641862,138.062606196757,119.001323210632,128.117239894991,127.025576552557,144.500997641711,116.012791912443,112.907211366914,106.866096794074,116.746111834874,99.8708441567545,98.0856975207596,109.092356202413,93.7328231207286,101.775650989347,102.403143625861,88.3038563699799,100.891522302518,111.263193216893,112.607173902814,119.66136908251,113.939467554295,105.388795956716,136.334938801124,116.130975432518,114.56817908533,116.525118719956,142.320713887873,105.519796458235,150.947271075932,115.787777689194,102.247652705835,154.689334318143,115.582883524731,110.535488092194,101.672905220744,121.176573174722,118.393950780612,117.259747558201,128.384205927558,129.150384440575
|phase1_expression=126.677738059892,268.362088474669,252.069578621803,131.571931918471,148.766031794065,203.973315372946,243.657984141133,193.039368545157,209.352829839528,181.634072425867,167.793608860995,128.11408734651,208.69368978614,173.879180411386,279.812199925157,250.461905761215,307.807226376385,303.947796322662,308.644590046518,365.823879849902,105.623766367629,252.000434147847,309.782949918777,314.705095634631,345.490377287158,316.976044191491,339.009690977192,304.245380552475,341.472084763104,314.281571810634,410.644905733624,76.2036808151557,81.1885519611633,95.0890086092632,167.245087835988,187.512679964379,160.27294466596,1258.10608199514,1367.33685291665,1270.06860288043,1386.4616172891,1310.76428563526,1312.33448424321,182.802179700538,184.911522544395,239.161418066671,290.267188753123,269.479093286232,262.305302184959,265.591242135471,231.117582103474,307.630487741039,338.920864236627,257.503560414027,264.169726125977,298.420945801699,327.794255289938,338.79656462628,197.258549338108,217.415292480806,274.448997718176,295.133587432214,277.459976386675,961.992797773815,1013.58802163115,863.233339659512,477.562576166337,313.90635544771,165.177552407405,211.419299427428,214.110810655707,176.817959345954,207.616428494517,212.766518236375,189.774032616108,273.927198409786,140.948327679218,147.989624840733,144.082928194356,209.039766052357,185.628428869289,202.63530114658,148.246172469733,140.69065250792,123.460984203663,149.082064249676,156.466477198214,152.661146130921,232.630865919541,226.790251880463,202.905142091174,204.78088272157,162.513148756152,166.228583024448,151.397905265307,144.712684532439,129.06842210108,142.309319352678,239.782482248448,208.11700938659,142.815227653554,168.107685412756,89.181833897326,106.660005473,439.693304293776,436.032328482645,454.46647606829,134.85116194821,162.354053046777,136.269883661509,133.410216283158,147.665756981388,142.7509928015,158.409495220806,133.580771306161,113.099932196708,228.408150186561,87.0488128657868,297.229145455158,100.942514367183,139.130156630048,169.221463344193,247.901042420102,87.2486775094411,69.5363066620671,245.238773000248,408.090314067164,458.325686478963,453.259499969622,100.659309680041,123.982663363848,148.900407253744,178.865225477852,149.082111623583,120.101489755426,139.203003712136,109.57915550294,190.840292915883,201.672761230072,118.899648575858,90.6939487450045,125.066744811809,117.220446503282,116.645529004843,79.1264485129943,87.5016709545524,97.0749866438791,79.6806381876168,112.310924318011,81.6938266324979,92.1983890619092,120.776848567594,107.326238201081,101.689632624473,131.906349437492,86.380871799226,374.981842025267,449.844141636522,375.095819202182,112.883546031849,111.634404551002,127.483939514399,97.3020863255214,114.320018645242,117.243005794407,123.940592551967,113.479648792039,119.567710583982,98.5713500981748,132.154808583672,100.768530265499,99.2697914618006,127.119516753518,121.054189721855,186.106604479253,159.296339963132,265.987120301957,230.600894130611,91.5006594796154,101.719662274872,103.609438902963,130.489240431303,156.998898954478,168.73013036184,206.420141771863,203.238510129429,171.661947610584,166.725523570484,152.266952040033,212.121380442396,219.16398257294,195.755871609043,139.974910903374,109.45007508012,91.2932658951951,125.652869280559,111.91058509572,102.047617940414,126.473074248515,121.925982231151,136.431894494155,140.672766870853,127.474629647474,146.323157713014,152.922898198072,176.06703399734,158.839475047198,157.247508158576,172.636327507803,168.014544271273,152.893518848858,133.16228539622,93.4493342427805,130.993613579313,115.765976725502,113.155337320306,118.402292924462,115.304001605845,182.351398694439,112.557898591668,96.8011960065634,126.799579074066,135.181583014177,134.507524725778,179.008817946282,135.813018909028,146.127778586439,149.267200823274,120.228895567745,158.455825330119,172.857666847761,155.06379079938,823.320410308427,1007.31332643225,124.908125346835,140.175867122804,108.37164824176,102.911860827954,125.082363322403,84.0728187590562,185.834341236175,209.275166942998,190.434283595794,183.050099231655,178.907335288162,192.208964405617,193.904326102274,186.459237347417,218.594141204428,100.573572040026,116.248929785572,122.865266530406,93.8228885876598,139.729694157738,100.886305138372,116.534705354391,123.348011241618,128.628664393523,117.234851473667,134.964029947384,109.315168010158,91.6104998283314,94.1153078935664,86.9101084323494,106.472794660749,110.35503127556,99.4083648801061,107.316412042661,116.293456720696,114.027302636807,105.694779250795,104.345758297211,125.880000760623,126.048488933444,227.631556821799,239.582072146981,211.486733734708,93.4905054178192,119.645140181666,120.444911081527,133.338908251503,119.98699771364,192.377352175701,105.136146239959,252.376290938428,139.930296479065,216.307207967823,230.374622916737,231.97010444258,207.730581271523,250.208248950955,254.43174032441,251.523952324051,378.049564733985,92.8446141160632,97.5933442208874,144.619151360392,166.225195331503,181.896015600566,163.590452164788,140.924142011698,191.343593590326,244.842684548197,152.849471019384,67.6431526421028,81.1874845018805,94.6422565414598,74.6692563241143,92.9950729039664,95.6291670277804,85.9054986886919,71.6124116641726,89.5498801395571,73.6831568519318,52.1334311326736,208.251328493969,159.95019486394,163.310421892075,171.235644684734,169.538280797105,173.051460014482,180.653760628513,184.464219441047,200.317436697125,186.70667630475,201.04741316286,220.35226835258,183.86082937467,200.443887241391,134.677847867436,166.489465030549,181.939701204017,203.308270416899,139.289697297209,238.919791249355,182.968472642998,206.008012294982,148.966914898503,242.843292325339,256.861481971005,262.959040668683,304.867545477702,213.06066364867,218.308836345623,232.882762579973,206.247111076693,246.509470487407,188.464753477662,116.345616641862,138.062606196757,119.001323210632,128.117239894991,127.025576552557,144.500997641711,116.012791912443,112.907211366914,106.866096794074,116.746111834874,99.8708441567545,98.0856975207596,109.092356202413,93.7328231207286,101.775650989347,102.403143625861,88.3038563699799,100.891522302518,111.263193216893,112.607173902814,119.66136908251,113.939467554295,105.388795956716,136.334938801124,116.130975432518,114.56817908533,116.525118719956,142.320713887873,105.519796458235,150.947271075932,115.787777689194,102.247652705835,154.689334318143,115.582883524731,110.535488092194,101.672905220744,121.176573174722,118.393950780612,117.259747558201,128.384205927558,129.150384440575
|short_description=p1@Arpc3
|short_description=p1@Arpc3
}}
}}

Latest revision as of 20:04, 1 October 2015

Short description:p1@Arpc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arpc3_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 0bp_to_ENSMUST00000148913, NM_019824, uc008zlf.1_5end
EntrezGene:Arpc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arpc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7126.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5268.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6252.07
CD326+ enterocyte, pool1.CNhs13542.11848-124I3131.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I4148.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7203.97
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8243.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9193.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7209.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2181.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6167.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1128.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4208.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8173.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1279.81
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3250.46
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5307.81
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2303.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4308.64
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6365.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3105.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2252.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9309.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1314.71
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2345.49
GP2+ M cell, pool1.CNhs13228.11845-124H9316.98
GP2+ M cell, pool2.CNhs13231.11846-124I1339.01
GP2+ M cell, pool3.CNhs13240.11847-124I2304.25
Ileum epithelium, pool1.CNhs13199.10252-104B9341.47
Ileum epithelium, pool2.CNhs13232.10253-104C1314.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8410.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I376.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G681.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5167.25
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6187.51
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7160.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81258.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11367.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31270.07
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91386.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21310.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41312.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8182.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9184.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3239.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7290.27
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2269.48
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8262.31
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3265.59
Mouse Astrocytes, donor2.CNhs12078.11552-120C4231.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C4307.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2338.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9257.50
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1264.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1298.42
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1327.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5338.80
Mouse Granule cells, donor1.CNhs12131.11713-123C3197.26
Mouse Granule cells, donor2.CNhs12357.11731-123E3217.42
Mouse Granule cells, donor3.CNhs12108.11636-122C7274.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6295.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1277.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7961.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71013.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2863.23
Mouse Microglia, donor1.CNhs12629.11718-123C8477.56
Mouse Microglia, donor2.CNhs12634.11736-123E8313.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5165.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5211.42
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9214.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1176.82
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5207.62
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2212.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2189.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6273.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3140.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3147.99
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7144.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4209.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4185.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8202.64
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4148.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5140.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6123.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6149.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6156.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1152.66
Mouse Schwann, donor1.CNhs12507.11728-123D9232.63
Mouse Schwann, donor2.CNhs12573.11746-123F9226.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3202.91
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7204.78
Mouse hepatocyte, donor1.CNhs13078.11714-123C4162.51
Mouse hepatocyte, donor3.CNhs12615.11637-122C8166.23
Mouse hepatocyte, donor6.CNhs13090.11822-124F4151.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F6144.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7129.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7142.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3239.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8208.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6142.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1168.11
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I889.18
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6106.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1439.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2436.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3454.47
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6134.85
accessory axillary lymph node, adult.CNhs10475.1063-29H9162.35
adrenal gland, adult.CNhs10508.49-24D7136.27
adrenal gland, embryo E14.CNhs11038.406-44C5133.41
adrenal gland, embryo E16.CNhs11004.1254-43D6147.67
adrenal gland, embryo E17.CNhs11043.1263-45I1142.75
adrenal gland, embryo E18.CNhs11026.1262-18F5158.41
adrenal gland, neonate N00.CNhs11191.1311-23C1133.58
adrenal gland, neonate N25.CNhs11223.1377-27I3113.10
amnion, adult pregnant day17.5.CNhs10488.583-22A8228.41
aorta, adult.CNhs10498.46-23H187.05
bone (os femoris), adult.CNhs10483.56-12G2297.23
bone (os femoris), neonate N02.CNhs11227.1985-43F5100.94
bone (os femoris), neonate N16.CNhs11225.1525-43A6139.13
bone (os femoris), neonate N20.CNhs11195.1350-25C3169.22
cecum, adult.CNhs10467.37-13H4247.90
cerebellum, adult.CNhs10494.15-8B287.25
cerebellum, neonate N30.CNhs11135.1395-42I269.54
colon, adult.CNhs10468.36-18H7245.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7408.09
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1458.33
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4453.26
corpora quadrigemina, adult.CNhs10501.16-22A4100.66
corpus striatum, adult.CNhs10487.19-21D8123.98
corpus striatum, neonate N00.CNhs11226.630-43F1148.90
cortex, adult.CNhs10473.12-14D5178.87
cortex, neonate N30.CNhs11107.1392-42F2149.08
diencephalon, adult.CNhs10482.20-12F2120.10
diencephalon, neonate N30.CNhs11201.1388-42B2139.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1109.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2190.84
epididymis, adult.CNhs10490.58-23B2201.67
eyeball, adult.CNhs10484.31-12G4118.90
eyeball, embryo E12.CNhs11016.345-16C690.69
eyeball, embryo E14.CNhs10521.399-16E2125.07
eyeball, embryo E15.CNhs10593.426-16C9117.22
eyeball, embryo E17.CNhs11023.1261-18D4116.65
eyeball, neonate N00.CNhs11207.633-15C679.13
eyeball, neonate N01.CNhs11140.1532-43E787.50
eyeball, neonate N02.CNhs11205.1551-44G897.07
eyeball, neonate N16.CNhs11188.777-19A279.68
forelimb, embryo E11.CNhs10596.335-25E2112.31
forelimb, embryo E12.CNhs10600.359-14H281.69
forelimb, embryo E13.CNhs10589.384-1E292.20
forelimb, embryo E14.CNhs10577.413-26A8120.78
forelimb, embryo E15.CNhs11007.437-20E7107.33
forelimb, embryo E17.CNhs10598.1517-43C4101.69
forelimb, embryo E18.CNhs11008.1520-43B5131.91
gonad, embryo E13.CNhs11044.1564-45I686.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8374.98
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2449.84
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5375.10
heart, embryo E11.CNhs10586.331-24E9112.88
heart, embryo E12.CNhs11015.353-12F5111.63
heart, embryo E13.CNhs11013.376-3I9127.48
heart, embryo E14.CNhs10597.403-26D497.30
heart, embryo E15.CNhs11017.431-16C8114.32
heart, embryo E16.CNhs11021.457-17C6117.24
heart, embryo E17.CNhs11025.479-18E5123.94
heart, embryo E18.CNhs11030.1283-20G3113.48
heart, neonate N00.CNhs11213.639-21E3119.57
heart, neonate N03.CNhs11221.1349-25I298.57
heart, neonate N10.CNhs11118.749-24G1132.15
heart, neonate N16.CNhs11209.782-15G1100.77
heart, neonate N20.CNhs11127.821-26I699.27
heart, neonate N25.CNhs11196.1351-25D3127.12
heart, neonate N30.CNhs11202.1390-42D2121.05
hippocampus, adult.CNhs10478.13-16E8186.11
hippocampus, neonate N00.CNhs11228.627-43G1159.30
intestinal mucosa, adult.CNhs10506.860-29I3265.99
intestine, adult.CNhs10496.178-9A3230.60
intestine, embryo E12.CNhs11019.1251-16I591.50
intestine, embryo E13.CNhs11010.381-16D5101.72
intestine, embryo E15.CNhs10602.976-16D8103.61
intestine, embryo E16.CNhs10585.463-22H4130.49
intestine, embryo E17.CNhs10582.482-18D3157.00
intestine, embryo E18.CNhs10526.1289-20F7168.73
intestine, neonate N00.CNhs11126.644-26D1206.42
intestine, neonate N01.CNhs11192.1322-23E9203.24
intestine, neonate N06.CNhs11102.688-20B8171.66
intestine, neonate N07.CNhs11095.720-20F2166.73
intestine, neonate N10.CNhs11098.755-23A5152.27
intestine, neonate N20.CNhs11187.827-18D1212.12
intestine, neonate N25.CNhs11121.1352-25E3219.16
intestine, neonate N30.CNhs11131.1384-42G1195.76
kidney, embryo E14.CNhs10606.411-4I9139.97
kidney, embryo E15.CNhs10997.434-16F8109.45
kidney, embryo E16.CNhs10584.464-22A591.29
kidney, embryo E17.CNhs11028.483-18I2125.65
kidney, embryo E18.CNhs11001.1288-20C7111.91
kidney, neonate N00.CNhs11214.646-21G7102.05
kidney, neonate N10.CNhs11206.758-6D5126.47
kidney, neonate N20.CNhs11113.832-19I1121.93
kidney, neonate N25.CNhs11122.1353-25F3136.43
kidney, neonate N30.CNhs11203.1385-42H1140.67
liver, adult pregnant day01.CNhs10466.508-5B2127.47
liver, embryo E12.CNhs10601.355-15F8146.32
liver, embryo E13.CNhs10524.378-3H6152.92
liver, embryo E14.CNhs10594.409-16E1176.07
liver, embryo E15.CNhs10520.433-16D7158.84
liver, embryo E16.CNhs10523.462-17F5157.25
liver, embryo E17.CNhs10510.481-18A3172.64
liver, embryo E18.CNhs10579.499-43G4168.01
liver, neonate N00.CNhs11117.641-24F4152.89
liver, neonate N03.CNhs11123.1345-25G2133.16
liver, neonate N06.CNhs11101.684-20A893.45
liver, neonate N07.CNhs11103.716-20H2130.99
liver, neonate N10.CNhs11115.751-24B9115.77
liver, neonate N20.CNhs11220.823-25A3113.16
liver, neonate N25.CNhs11198.1368-26H1118.40
liver, neonate N30.CNhs11106.1382-42D1115.30
lung, adult.CNhs10474.28-22B1182.35
lung, embryo E12.CNhs10522.354-16G2112.56
lung, embryo E14.CNhs10604.404-26F896.80
lung, embryo E15.CNhs11020.432-17C5126.80
lung, embryo E16.CNhs10998.458-17B6135.18
lung, embryo E17.CNhs10605.480-44A6134.51
lung, embryo E18.CNhs10583.1287-20I6179.01
lung, neonate N00.CNhs11224.640-42C6135.81
lung, neonate N06.CNhs11212.683-20E5146.13
lung, neonate N07.CNhs11111.715-19A3149.27
lung, neonate N10.CNhs11219.750-23E6120.23
lung, neonate N20.CNhs11109.822-18A4158.46
lung, neonate N25.CNhs11119.1359-25C7172.86
lung, neonate N30.CNhs11133.1394-42H2155.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1823.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11007.31
mammary gland, adult lactating day02.CNhs10480.595-22B6124.91
mammary gland, adult pregnant day19.CNhs10476.588-5H2140.18
medulla oblongata, adult.CNhs10477.17-12C2108.37
medulla oblongata, neonate N30.CNhs11200.1396-42A3102.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7125.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C284.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1185.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2209.28
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3190.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7183.05
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8178.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9192.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4193.90
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5186.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6218.59
olfactory brain, adult.CNhs10489.18-22I9100.57
ovary, adult.CNhs10507.91-2I7116.25
ovary, embryo E18.CNhs11040.505-44H7122.87
ovary, neonate N00.CNhs11217.1299-22I493.82
oviduct, adult pregnant day01.CNhs10500.988-6G6139.73
pancreas, adult.CNhs10486.34-16E4100.89
pancreas, embryo E14.CNhs11012.405-44F4116.53
pancreas, embryo E15.CNhs11042.1556-45F2123.35
pancreas, embryo E16.CNhs11003.460-26E5128.63
pancreas, embryo E17.CNhs10599.1558-45G3117.23
pancreas, embryo E18.CNhs10580.1535-43I7134.96
pancreas, neonate N00.CNhs11105.645-26G9109.32
pancreas, neonate N01.CNhs11138.1531-43D791.61
pancreas, neonate N02.CNhs11139.1539-43D894.12
pancreas, neonate N16.CNhs11136.787-43B686.91
pancreas, neonate N25.CNhs11094.1555-45E2106.47
pancreas, neonate N30.CNhs11182.1548-44H5110.36
pituitary gland, adult.CNhs10493.21-1G899.41
pituitary gland, embryo E12.CNhs11018.346-16E6107.32
pituitary gland, embryo E13.CNhs11009.370-44C7116.29
pituitary gland, embryo E14.CNhs11037.398-44A5114.03
pituitary gland, embryo E15.CNhs10592.427-16B9105.69
pituitary gland, embryo E16.CNhs11036.449-43F6104.35
pituitary gland, embryo E17.CNhs11039.1265-44F5125.88
pituitary gland, neonate N00.CNhs11190.1308-22E9126.05
placenta, adult pregnant day10.CNhs10472.539-13I7227.63
placenta, adult pregnant day17.CNhs10464.577-18G3239.58
prostate, adult.CNhs10470.859-1F8211.49
skin, adult.CNhs10492.30-1C393.49
skin, neonate N00.CNhs11124.650-25G4119.65
skin, neonate N03.CNhs11215.662-22H3120.44
skin, neonate N06.CNhs11097.693-20I5133.34
skin, neonate N10.CNhs11108.762-6C4119.99
small intestine, neonate N16.CNhs11114.790-21I1192.38
spinal cord, adult.CNhs10505.24-13C9105.14
spleen, adult.CNhs10465.25-2G2252.38
spleen, embryo E16.CNhs11035.461-43C1139.93
spleen, embryo E18.CNhs11011.1271-21F2216.31
spleen, neonate N10.CNhs11116.752-24D1230.37
spleen, neonate N20.CNhs11112.824-19H1231.97
spleen, neonate N25.CNhs11099.1354-25G3207.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6250.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9254.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3251.52
stomach, adult.CNhs10503.33-1H6378.05
stomach, embryo E12.CNhs10588.356-43E392.84
stomach, embryo E15.CNhs10603.1252-16G897.59
stomach, embryo E16.CNhs11022.459-17D4144.62
stomach, embryo E17.CNhs11006.1035-18D5166.23
stomach, embryo E18.CNhs10999.1286-20C6181.90
stomach, neonate N03.CNhs11193.1340-24B8163.59
stomach, neonate N07.CNhs11210.718-18A9140.92
stomach, neonate N25.CNhs11104.1355-25E4191.34
stomach, neonate N30.CNhs11134.1386-42I1244.84
submandibular gland, adult.CNhs10469.59-29C1152.85
testis, adult.CNhs10504.57-7G567.64
testis, embryo E13.CNhs11031.389-23F581.19
testis, embryo E15.CNhs11034.443-27C594.64
testis, embryo E16.CNhs11033.470-26G574.67
testis, embryo E17.CNhs11029.486-18I593.00
testis, embryo E18.CNhs11027.503-18G595.63
testis, neonate N00.CNhs11189.1300-22B785.91
testis, neonate N07.CNhs11222.726-26I471.61
testis, neonate N10.CNhs11204.763-44D989.55
testis, neonate N20.CNhs11110.839-18H373.68
testis, neonate N30.CNhs11130.1391-42E252.13
thymus, adult.CNhs10471.38-12B5208.25
thymus, embryo E14.CNhs11041.402-44I4159.95
thymus, embryo E15.CNhs11005.430-45I2163.31
thymus, embryo E16.CNhs11002.456-26C5171.24
thymus, embryo E17.CNhs10581.478-18C1169.54
thymus, embryo E18.CNhs10595.1273-19G4173.05
thymus, neonate N02.CNhs11181.1541-43F8180.65
thymus, neonate N03.CNhs11137.2104-43C7184.46
thymus, neonate N06.CNhs11197.681-26C4200.32
thymus, neonate N07.CNhs11211.713-19D3186.71
thymus, neonate N10.CNhs11194.748-24E4201.05
thymus, neonate N20.CNhs11186.820-7A2220.35
thymus, neonate N25.CNhs11125.1362-25G7183.86
thymus, neonate N30.CNhs11132.1393-42G2200.44
tongue, adult.CNhs10499.32-1B4134.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3166.49
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7181.94
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5203.31
urinary bladder, adult.CNhs10481.879-12E4139.29
uterus, adult pregnant day19.CNhs10497.590-15F5238.92
uterus, adult.CNhs10509.92-27E5182.97
vagina, adult.CNhs10502.89-27D5206.01
vesicular gland, adult.CNhs10491.51-27F8148.97
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1242.84
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2256.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3262.96
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7304.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4213.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5218.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6232.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7206.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8246.51
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9188.46
whole body, embryo E11.CNhs11014.324-5I8116.35
whole body, embryo E12.CNhs10587.857-27C9138.06
whole body, embryo E13.CNhs10512.372-23H2119.00
whole body, embryo E14.5.CNhs10578.420-27D2128.12
whole body, embryo E14.CNhs10519.395-14B1127.03
whole body, embryo E16.CNhs10514.453-14F2144.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5116.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5112.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5106.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5116.75
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G599.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G598.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5109.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G593.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5101.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5102.40
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G588.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5100.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5111.26
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5112.61
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5119.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5113.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5105.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5136.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5116.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5114.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5116.53
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5142.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5105.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5150.95
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5115.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5102.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5154.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5115.58
whole body, embryo E17.5.CNhs10513.490-9F9110.54
whole body, embryo E17.CNhs10517.475-3I5101.67
whole body, embryo E18.CNhs10516.493-3B3121.18
whole body, neonate N00.CNhs10525.657-19C2118.39
whole body, neonate N01.CNhs10576.659-23C6117.26
whole body, neonate N06.CNhs10515.692-21D1128.38
whole body, neonate N10.CNhs10518.761-6B4129.15





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
musculoskeletal system2.66e-1032
bone marrow3.31e-1016
hemolymphoid system4.73e-1048
immune system4.73e-1048
connective tissue5.57e-1046
hematopoietic system3.53e-0945
blood island3.53e-0945
bone element8.99e-0822
skeletal element8.99e-0822
skeletal system8.99e-0822
organ system subdivision9.69e-08194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:122841899..122841937,%2B&oldid=4319846"