FFCP PHASE1:Mm9::chr3:154260009..154260052,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:154260009..154260052,-
|short_description=p1@Tyw3
|description=CAGE_peak_1_at_Tyw3_5end
|association_with_transcript=6bp_to_ENSMUST00000052774_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=209584 | |EntrezGene=209584 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=473 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BSA9 | |UniProt=Q8BSA9 | ||
|association_with_transcript=6bp_to_ENSMUST00000052774_5end | |||
|cluster_id=chr3:154260009..154260052,- | |||
|description=CAGE_peak_1_at_Tyw3_5end | |||
|id=chr3:154260009..154260052,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!6.76e-15!94;UBERON:0000033!2.22e-12!63;UBERON:0007811!2.94e-12!86;UBERON:0003056!4.82e-11!49;UBERON:0002346!7.87e-11!71;UBERON:0003075!7.87e-11!71;UBERON:0007284!7.87e-11!71;UBERON:0000468!1.42e-09!333;UBERON:0001049!1.80e-09!52;UBERON:0005068!1.80e-09!52;UBERON:0006241!1.80e-09!52;UBERON:0007135!1.80e-09!52;UBERON:0000955!2.47e-09!50;UBERON:0006238!2.47e-09!50;UBERON:0002616!8.21e-09!49;UBERON:0000922!3.41e-08!328;UBERON:0003080!3.64e-08!40;UBERON:0002780!1.17e-07!39;UBERON:0001890!1.17e-07!39;UBERON:0006240!1.17e-07!39;UBERON:0002020!1.61e-07!34;UBERON:0004121!3.33e-07!102;UBERON:0000924!3.33e-07!102;UBERON:0006601!3.33e-07!102;UBERON:0002791!3.58e-07!29;UBERON:0003528!3.58e-07!29;UBERON:0001893!3.58e-07!29;UBERON:0001017!7.82e-07!73;UBERON:0005743!7.82e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.34e-12,64;UBERON:0003075,3.34e-12,64;UBERON:0007284,3.34e-12,64;UBERON:0010314,5.86e-12,92;UBERON:0010371,1.32e-11,73;UBERON:0003056,4.78e-11,49;UBERON:0001049,2.15e-09,52;UBERON:0005068,2.15e-09,52;UBERON:0006241,2.15e-09,52;UBERON:0007135,2.15e-09,52;UBERON:0000073,3.36e-09,54;UBERON:0000955,4.74e-09,47;UBERON:0006238,4.74e-09,47;UBERON:0000922,1.52e-08,320;UBERON:0002616,1.58e-08,46;UBERON:0003080,3.62e-08,40;UBERON:0004121,7.19e-08,95;UBERON:0000924,7.19e-08,95;UBERON:0006601,7.19e-08,95;UBERON:0002780,1.16e-07,39;UBERON:0001890,1.16e-07,39;UBERON:0006240,1.16e-07,39;UBERON:0002020,1.60e-07,34;UBERON:0003528,3.56e-07,29;UBERON:0002791,3.56e-07,29;UBERON:0001893,3.56e-07,29;UBERON:0001017,8.88e-07,73 | |||
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| ||
|short_description=p1@Tyw3 | |||
}} | }} |
Latest revision as of 20:12, 1 October 2015
Short description: | p1@Tyw3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tyw3_5end |
Coexpression cluster: | MCL_coexpression_mm9:473 |
Association with transcript: | 6bp_to_ENSMUST00000052774_5end |
EntrezGene: | Tyw3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.34e-12 | 64 |
neural plate | 3.34e-12 | 64 |
presumptive neural plate | 3.34e-12 | 64 |
structure with developmental contribution from neural crest | 5.86e-12 | 92 |
ecto-epithelium | 1.32e-11 | 73 |
pre-chordal neural plate | 4.78e-11 | 49 |
neural tube | 2.15e-09 | 52 |
neural rod | 2.15e-09 | 52 |
future spinal cord | 2.15e-09 | 52 |
neural keel | 2.15e-09 | 52 |
regional part of nervous system | 3.36e-09 | 54 |
brain | 4.74e-09 | 47 |
future brain | 4.74e-09 | 47 |
embryo | 1.52e-08 | 320 |
regional part of brain | 1.58e-08 | 46 |
anterior neural tube | 3.62e-08 | 40 |
ectoderm-derived structure | 7.19e-08 | 95 |
ectoderm | 7.19e-08 | 95 |
presumptive ectoderm | 7.19e-08 | 95 |
regional part of forebrain | 1.16e-07 | 39 |
forebrain | 1.16e-07 | 39 |
future forebrain | 1.16e-07 | 39 |
gray matter | 1.60e-07 | 34 |
brain grey matter | 3.56e-07 | 29 |
regional part of telencephalon | 3.56e-07 | 29 |
telencephalon | 3.56e-07 | 29 |
central nervous system | 8.88e-07 | 73 |