FFCP PHASE1:Mm9::chr11:60727277..60727318,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:60727277..60727318,-
|short_description=p1@Gm16515
|description=CAGE_peak_1_at_Gm16515_5end
|association_with_transcript=0bp_to_ENSMUST00000019075,NM_0252...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=24083 | |EntrezGene=24083 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBW3 | |UniProt=Q9DBW3 | ||
|association_with_transcript=0bp_to_ENSMUST00000019075,NM_025294,uc007jgu.2_5end | |||
|cluster_id=chr11:60727277..60727318,- | |||
|description=CAGE_peak_1_at_Gm16515_5end | |||
|id=chr11:60727277..60727318,- | |||
|ontology_enrichment_celltype=CL:0000055!2.75e-11!50;CL:0000221!8.35e-11!44;CL:0000133!8.35e-11!44;CL:0002319!8.60e-11!43;CL:0000393!1.25e-10!39;CL:0000211!1.25e-10!39;CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.35e-11,44;CL:0000133,8.35e-11,44;CL:0002319,8.60e-11,43;CL:0000393,1.24e-10,39;CL:0000211,1.24e-10,39;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.25e-10!102;UBERON:0000924!2.25e-10!102;UBERON:0006601!2.25e-10!102;UBERON:0000468!2.36e-10!333;UBERON:0000922!3.91e-08!328;UBERON:0001017!4.93e-08!73;UBERON:0005743!4.93e-08!73;UBERON:0000073!2.32e-07!75;UBERON:0001016!2.32e-07!75;UBERON:0002346!8.87e-07!71;UBERON:0003075!8.87e-07!71;UBERON:0007284!8.87e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,7.81e-10,95;UBERON:0000924,7.81e-10,95;UBERON:0006601,7.81e-10,95;UBERON:0000922,2.00e-09,320;UBERON:0010314,5.62e-09,92;UBERON:0001017,4.93e-08,73;UBERON:0001016,2.32e-07,75 | |||
|phase1_expression=9.44878197918284,3.48975407639361,7.27998783023258,2.11724947914781,4.50806156951712,3.52546471014969,3.73780224952841,5.93967287831251,1.12630977721333,0.936258105287974,0.68487187290202,0.797721589953364,2.73921167889929,4.10875891369288,12.3250611871795,11.3386149738303,13.2916756844348,4.57420139769445,4.11343300817216,6.36584477697045,7.73893940374735,2.78014663362479,2.61199789138935,3.35984087866154,3.21172993494038,2.8711598205751,4.73838195774982,3.44753972297422,5.89072600314759,3.02436155711917,1.77384408524244,3.81018404075779,4.30545351309199,0,2.88851619751275,2.32728503501889,1.02084678131185,2.92972141515835,5.4693474116666,1.57057123192139,2.94115744015507,0.683045484958446,1.45653105909346,15.9888958828983,17.538209100976,15.6014739337429,27.3836970521814,13.9536100083486,14.0599156950062,13.2212331370513,13.9986421625363,15.8127820801469,2.51673909086605,2.90144856804538,2.01656279485478,7.46052364504246,13.1805382371828,14.9544906760458,27.9196715986245,38.0873505075864,32.3254015788151,14.9091594110418,13.3394219416671,16.1981949110652,11.8663963508037,9.2362414942993,15.579205746957,15.3687322128622,32.7659174894789,37.6666567945417,43.3269420383847,16.5677570954206,13.4729809980484,29.8877550084488,33.641760327401,34.9303138911808,12.1127469099328,5.74593021383345,4.76180253094355,29.5425284515634,27.3548054371205,20.3156214517136,8.37548997004143,5.6276261003168,6.41752640662602,13.8475435172624,11.3897344639282,23.8591290656385,7.04253597998612,5.29000920747499,5.79728977403356,3.44169550792555,2.03991400112325,3.2382191498269,2.59910566979068,1.79210754838934,5.75822122540183,9.71452838694929,6.75443611967459,8.48014978824817,11.4083170019111,10.2661181931454,10.1922095882658,7.11066703153331,7.57718643539249,4.30711771307668,7.58286667522175,5.93756174539112,3.88406825470758,8.01587550950054,10.4091196059682,13.0920155674221,12.2226213545711,10.5505848386836,12.2292255421133,13.3206586809456,26.9442514830468,7.95296463059514,7.07688441559899,12.2942805960031,11.0420759230197,9.69750506270444,0,12.0040126774734,10.0534419270458,4.34276993854605,0.958520996047362,0.599902730993408,1.27070227073065,5.39246301857362,4.11750542536764,26.5130682958144,6.77914848749878,5.62574006126727,7.68815764870372,7.94982189032012,16.3961375799009,11.0722203842983,12.3834151632501,22.9381622916257,12.3614420814569,12.8745178482745,9.18316862007281,12.3577950625286,17.9616357759506,13.1957131893395,16.585205247072,12.9351685369508,14.6586235194333,14.3720620927543,14.9558455539357,13.5901354105096,7.78532297831674,13.2335823278423,9.4659782747654,19.5053581482123,0.702213187313235,0.257347907114715,1.13665399758237,16.9843133479112,13.1334593589414,11.884096056427,14.9149183418682,12.0026181365916,10.6444307892291,10.6965614585188,15.5598572811779,17.3980360127083,14.3167069424728,11.4917224855367,13.5384911941579,8.77199924551994,9.44065495751518,10.8707199195901,6.09840850835969,21.8157778244083,4.29544417878937,4.7601101999438,8.31824177087412,9.98617688999886,7.08771037271513,5.84882221407693,9.56225588532942,11.0330863145284,5.69434873853414,8.39964669092456,12.0640900224129,14.1259095149217,14.2323783596958,5.39291645192533,3.6743468478698,5.77509692437665,11.0007382552787,10.0538691096561,13.5249282807697,9.77526373657508,8.53390943537553,14.5181147172959,15.5561881325673,12.989693022205,11.1469096767376,13.9438795231635,2.66807364378434,6.00642380577939,8.84515478009414,8.09503604585473,11.3601667977562,8.68237775108701,5.34714288740982,5.17853047411459,7.13394997810156,5.76578967694971,8.62609239164127,10.0478055870496,8.11297950097858,10.3557339958316,4.84373016509163,6.27176577772377,11.4546977903295,10.6115190591471,11.5705133273838,8.14776411720903,10.7957514212711,14.2380318825543,19.2815349117671,19.5133647857799,17.8127712839996,21.9250042752287,21.3669390001033,9.01248230936559,11.3972088031491,12.8737662137545,1.50791283939272,9.24639662491806,9.83528546038072,12.1412168374082,9.15138362930414,7.61875962849321,5.73772308818364,7.57412781613119,18.2994767261429,16.7888660047555,17.4492952163567,14.5770966751057,14.2591151412732,14.1538265394416,16.5972387686707,16.0740721851222,17.392662229647,11.5675673911851,12.4907274983276,17.2723635557238,20.0350960004899,13.6925202067204,3.98235415019888,11.8962511715941,6.34879469625977,3.39489143560617,8.56375489354241,7.68587869859819,10.0787034335606,6.5436071305951,7.84294232446387,7.9009189483954,7.37930260024991,4.12542172992747,8.85142974959849,11.8840322060665,16.1698354728443,17.5756368725906,17.2020026633005,21.0475204770443,14.8094118541909,22.5304062344803,12.2029288193129,34.104963409075,8.15955072803359,9.39851641766436,10.9795810153216,10.3738230876428,10.6241386162791,10.5050175836839,5.24665505933731,11.1255181206306,14.0114122254239,9.90656966223468,11.6672552242918,13.9392658183471,13.3960343166605,12.5827995263587,0.849892149969277,1.95932033253121,1.93479963326193,7.63736494412091,14.7096237015228,10.979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| |phase1_expression=9.44878197918284,3.48975407639361,7.27998783023258,2.11724947914781,4.50806156951712,3.52546471014969,3.73780224952841,5.93967287831251,1.12630977721333,0.936258105287974,0.68487187290202,0.797721589953364,2.73921167889929,4.10875891369288,12.3250611871795,11.3386149738303,13.2916756844348,4.57420139769445,4.11343300817216,6.36584477697045,7.73893940374735,2.78014663362479,2.61199789138935,3.35984087866154,3.21172993494038,2.8711598205751,4.73838195774982,3.44753972297422,5.89072600314759,3.02436155711917,1.77384408524244,3.81018404075779,4.30545351309199,0,2.88851619751275,2.32728503501889,1.02084678131185,2.92972141515835,5.4693474116666,1.57057123192139,2.94115744015507,0.683045484958446,1.45653105909346,15.9888958828983,17.538209100976,15.6014739337429,27.3836970521814,13.9536100083486,14.0599156950062,13.2212331370513,13.9986421625363,15.8127820801469,2.51673909086605,2.90144856804538,2.01656279485478,7.46052364504246,13.1805382371828,14.9544906760458,27.9196715986245,38.0873505075864,32.3254015788151,14.9091594110418,13.3394219416671,16.1981949110652,11.8663963508037,9.2362414942993,15.579205746957,15.3687322128622,32.7659174894789,37.6666567945417,43.3269420383847,16.5677570954206,13.4729809980484,29.8877550084488,33.641760327401,34.9303138911808,12.1127469099328,5.74593021383345,4.76180253094355,29.5425284515634,27.3548054371205,20.3156214517136,8.37548997004143,5.6276261003168,6.41752640662602,13.8475435172624,11.3897344639282,23.8591290656385,7.04253597998612,5.29000920747499,5.79728977403356,3.44169550792555,2.03991400112325,3.2382191498269,2.59910566979068,1.79210754838934,5.75822122540183,9.71452838694929,6.75443611967459,8.48014978824817,11.4083170019111,10.2661181931454,10.1922095882658,7.11066703153331,7.57718643539249,4.30711771307668,7.58286667522175,5.93756174539112,3.88406825470758,8.01587550950054,10.4091196059682,13.0920155674221,12.2226213545711,10.5505848386836,12.2292255421133,13.3206586809456,26.9442514830468,7.95296463059514,7.07688441559899,12.2942805960031,11.0420759230197,9.69750506270444,0,12.0040126774734,10.0534419270458,4.34276993854605,0.958520996047362,0.599902730993408,1.27070227073065,5.39246301857362,4.11750542536764,26.5130682958144,6.77914848749878,5.62574006126727,7.68815764870372,7.94982189032012,16.3961375799009,11.0722203842983,12.3834151632501,22.9381622916257,12.3614420814569,12.8745178482745,9.18316862007281,12.3577950625286,17.9616357759506,13.1957131893395,16.585205247072,12.9351685369508,14.6586235194333,14.3720620927543,14.9558455539357,13.5901354105096,7.78532297831674,13.2335823278423,9.4659782747654,19.5053581482123,0.702213187313235,0.257347907114715,1.13665399758237,16.9843133479112,13.1334593589414,11.884096056427,14.9149183418682,12.0026181365916,10.6444307892291,10.6965614585188,15.5598572811779,17.3980360127083,14.3167069424728,11.4917224855367,13.5384911941579,8.77199924551994,9.44065495751518,10.8707199195901,6.09840850835969,21.8157778244083,4.29544417878937,4.7601101999438,8.31824177087412,9.98617688999886,7.08771037271513,5.84882221407693,9.56225588532942,11.0330863145284,5.69434873853414,8.39964669092456,12.0640900224129,14.1259095149217,14.2323783596958,5.39291645192533,3.6743468478698,5.77509692437665,11.0007382552787,10.0538691096561,13.5249282807697,9.77526373657508,8.53390943537553,14.5181147172959,15.5561881325673,12.989693022205,11.1469096767376,13.9438795231635,2.66807364378434,6.00642380577939,8.84515478009414,8.09503604585473,11.3601667977562,8.68237775108701,5.34714288740982,5.17853047411459,7.13394997810156,5.76578967694971,8.62609239164127,10.0478055870496,8.11297950097858,10.3557339958316,4.84373016509163,6.27176577772377,11.4546977903295,10.6115190591471,11.5705133273838,8.14776411720903,10.7957514212711,14.2380318825543,19.2815349117671,19.5133647857799,17.8127712839996,21.9250042752287,21.3669390001033,9.01248230936559,11.3972088031491,12.8737662137545,1.50791283939272,9.24639662491806,9.83528546038072,12.1412168374082,9.15138362930414,7.61875962849321,5.73772308818364,7.57412781613119,18.2994767261429,16.7888660047555,17.4492952163567,14.5770966751057,14.2591151412732,14.1538265394416,16.5972387686707,16.0740721851222,17.392662229647,11.5675673911851,12.4907274983276,17.2723635557238,20.0350960004899,13.6925202067204,3.98235415019888,11.8962511715941,6.34879469625977,3.39489143560617,8.56375489354241,7.68587869859819,10.0787034335606,6.5436071305951,7.84294232446387,7.9009189483954,7.37930260024991,4.12542172992747,8.85142974959849,11.8840322060665,16.1698354728443,17.5756368725906,17.2020026633005,21.0475204770443,14.8094118541909,22.5304062344803,12.2029288193129,34.104963409075,8.15955072803359,9.39851641766436,10.9795810153216,10.3738230876428,10.6241386162791,10.5050175836839,5.24665505933731,11.1255181206306,14.0114122254239,9.90656966223468,11.6672552242918,13.9392658183471,13.3960343166605,12.5827995263587,0.849892149969277,1.95932033253121,1.93479963326193,7.63736494412091,14.7096237015228,10.979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| ||
|short_description=p1@Gm16515 | |||
}} | }} |
Latest revision as of 20:15, 1 October 2015
Short description: | p1@Gm16515 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm16515_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 0bp_to_ENSMUST00000019075, NM_025294, uc007jgu.2_5end |
EntrezGene: | Gm16515 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.35e-11 | 44 |
neurectodermal cell | 8.35e-11 | 44 |
neural cell | 8.60e-11 | 43 |
electrically responsive cell | 1.24e-10 | 39 |
electrically active cell | 1.24e-10 | 39 |
neuron | 1.97e-09 | 33 |
neuronal stem cell | 1.97e-09 | 33 |
neuroblast | 1.97e-09 | 33 |
electrically signaling cell | 1.97e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 7.81e-10 | 95 |
ectoderm | 7.81e-10 | 95 |
presumptive ectoderm | 7.81e-10 | 95 |
embryo | 2.00e-09 | 320 |
structure with developmental contribution from neural crest | 5.62e-09 | 92 |
central nervous system | 4.93e-08 | 73 |
nervous system | 2.32e-07 | 75 |