FFCP PHASE1:Mm9::chr6:86354251..86354313,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21841 | |EntrezGene=21841 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2860 | |||
|TSSclassifier=NA | |||
|UniProt=G5E8L2,Q8CII5 | |UniProt=G5E8L2,Q8CII5 | ||
|association_with_transcript=0bp_to_ENSMUST00000095752,ENSMUST00000113712,ENSMUST00000130967,ENSMUST00000139928,ENSMUST00000141960,ENSMUST00000148728,ENSMUST00000154438,ENSMUST00000154983_5end | |association_with_transcript=0bp_to_ENSMUST00000095752,ENSMUST00000113712,ENSMUST00000130967,ENSMUST00000139928,ENSMUST00000141960,ENSMUST00000148728,ENSMUST00000154438,ENSMUST00000154983_5end | ||
|cluster_id=chr6:86354251..86354313,+ | |||
|description=CAGE_peak_1_at_Tia1_5end | |description=CAGE_peak_1_at_Tia1_5end | ||
|id=chr6:86354251..86354313,+ | |id=chr6:86354251..86354313,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.68e-07!33;CL:0000047!1.68e-07!33;CL:0000031!1.68e-07!33;CL:0000404!1.68e-07!33 | |ontology_enrichment_celltype=CL:0000540!1.68e-07!33;CL:0000047!1.68e-07!33;CL:0000031!1.68e-07!33;CL:0000404!1.68e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.68e-07,33;CL:0000047,1.68e-07,33;CL:0000031,1.68e-07,33;CL:0000404,1.68e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.78e-18!94;UBERON:0007811!4.66e-15!86;UBERON:0003056!1.40e-11!49;UBERON:0000033!3.10e-10!63;UBERON:0002346!7.16e-09!71;UBERON:0003075!7.16e-09!71;UBERON:0007284!7.16e-09!71;UBERON:0003080!9.80e-09!40;UBERON:0001017!1.16e-08!73;UBERON:0005743!1.16e-08!73;UBERON:0002780!1.96e-08!39;UBERON:0001890!1.96e-08!39;UBERON:0006240!1.96e-08!39;UBERON:0001049!4.56e-08!52;UBERON:0005068!4.56e-08!52;UBERON:0006241!4.56e-08!52;UBERON:0007135!4.56e-08!52;UBERON:0000073!4.89e-08!75;UBERON:0001016!4.89e-08!75;UBERON:0000955!6.24e-08!50;UBERON:0006238!6.24e-08!50;UBERON:0002616!1.92e-07!49;UBERON:0002020!3.61e-07!34;UBERON:0002791!4.99e-07!29;UBERON:0003528!4.99e-07!29;UBERON:0001893!4.99e-07!29;UBERON:0004121!7.21e-07!102;UBERON:0000924!7.21e-07!102;UBERON:0006601!7.21e-07!102 | |ontology_enrichment_uberon=UBERON:0000153!4.78e-18!94;UBERON:0007811!4.66e-15!86;UBERON:0003056!1.40e-11!49;UBERON:0000033!3.10e-10!63;UBERON:0002346!7.16e-09!71;UBERON:0003075!7.16e-09!71;UBERON:0007284!7.16e-09!71;UBERON:0003080!9.80e-09!40;UBERON:0001017!1.16e-08!73;UBERON:0005743!1.16e-08!73;UBERON:0002780!1.96e-08!39;UBERON:0001890!1.96e-08!39;UBERON:0006240!1.96e-08!39;UBERON:0001049!4.56e-08!52;UBERON:0005068!4.56e-08!52;UBERON:0006241!4.56e-08!52;UBERON:0007135!4.56e-08!52;UBERON:0000073!4.89e-08!75;UBERON:0001016!4.89e-08!75;UBERON:0000955!6.24e-08!50;UBERON:0006238!6.24e-08!50;UBERON:0002616!1.92e-07!49;UBERON:0002020!3.61e-07!34;UBERON:0002791!4.99e-07!29;UBERON:0003528!4.99e-07!29;UBERON:0001893!4.99e-07!29;UBERON:0004121!7.21e-07!102;UBERON:0000924!7.21e-07!102;UBERON:0006601!7.21e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.40e-11,49;UBERON:0002346,2.38e-11,64;UBERON:0003075,2.38e-11,64;UBERON:0007284,2.38e-11,64;UBERON:0010371,2.26e-10,73;UBERON:0000153,2.40e-09,43;UBERON:0003080,9.80e-09,40;UBERON:0001017,1.16e-08,73;UBERON:0000955,1.74e-08,47;UBERON:0006238,1.74e-08,47;UBERON:0004121,1.76e-08,95;UBERON:0000924,1.76e-08,95;UBERON:0006601,1.76e-08,95;UBERON:0002780,1.96e-08,39;UBERON:0001890,1.96e-08,39;UBERON:0006240,1.96e-08,39;UBERON:0001049,4.56e-08,52;UBERON:0005068,4.56e-08,52;UBERON:0006241,4.56e-08,52;UBERON:0007135,4.56e-08,52;UBERON:0001016,4.89e-08,75;UBERON:0002616,5.65e-08,46;UBERON:0010314,9.29e-08,92;UBERON:0000073,9.80e-08,54;UBERON:0007811,3.03e-07,36;UBERON:0002020,3.61e-07,34;UBERON:0003528,4.99e-07,29;UBERON:0002791,4.99e-07,29;UBERON:0001893,4.99e-07,29 | |||
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| ||
|short_description=p1@Tia1 | |short_description=p1@Tia1 | ||
}} | }} |
Latest revision as of 20:17, 1 October 2015
Short description: | p1@Tia1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tia1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2860 |
Association with transcript: | 0bp_to_ENSMUST00000095752, ENSMUST00000113712, ENSMUST00000130967, ENSMUST00000139928, ENSMUST00000141960, ENSMUST00000148728, ENSMUST00000154438, ENSMUST00000154983_5end |
EntrezGene: | Tia1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.68e-07 | 33 |
neuronal stem cell | 1.68e-07 | 33 |
neuroblast | 1.68e-07 | 33 |
electrically signaling cell | 1.68e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.40e-11 | 49 |
neurectoderm | 2.38e-11 | 64 |
neural plate | 2.38e-11 | 64 |
presumptive neural plate | 2.38e-11 | 64 |
ecto-epithelium | 2.26e-10 | 73 |
anterior region of body | 2.40e-09 | 43 |
anterior neural tube | 9.80e-09 | 40 |
central nervous system | 1.16e-08 | 73 |
brain | 1.74e-08 | 47 |
future brain | 1.74e-08 | 47 |
ectoderm-derived structure | 1.76e-08 | 95 |
ectoderm | 1.76e-08 | 95 |
presumptive ectoderm | 1.76e-08 | 95 |
regional part of forebrain | 1.96e-08 | 39 |
forebrain | 1.96e-08 | 39 |
future forebrain | 1.96e-08 | 39 |
neural tube | 4.56e-08 | 52 |
neural rod | 4.56e-08 | 52 |
future spinal cord | 4.56e-08 | 52 |
neural keel | 4.56e-08 | 52 |
nervous system | 4.89e-08 | 75 |
regional part of brain | 5.65e-08 | 46 |
structure with developmental contribution from neural crest | 9.29e-08 | 92 |
regional part of nervous system | 9.80e-08 | 54 |
craniocervical region | 3.03e-07 | 36 |
gray matter | 3.61e-07 | 34 |
brain grey matter | 4.99e-07 | 29 |
regional part of telencephalon | 4.99e-07 | 29 |
telencephalon | 4.99e-07 | 29 |