FFCP PHASE1:Mm9::chr19:10175991..10176022,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:10175991..10176022,- to FFCP PHASE1:Mm9::chr19:10175991..10176022,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56473 | |EntrezGene=56473 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3168 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0R9 | |UniProt=Q9Z0R9 | ||
|association_with_transcript=0bp_to_ENSMUST00000025567,NM_019699,uc008gpb.1,uc008gpc.1_5end | |||
|cluster_id=chr19:10175991..10176022,- | |||
|description=CAGE_peak_1_at_Fads2_5end | |||
|id=chr19:10175991..10176022,- | |||
|ontology_enrichment_celltype=CL:0002321!3.40e-10!70;CL:0000220!3.40e-10!70;CL:0000055!4.50e-09!50;CL:0000221!9.46e-09!44;CL:0000133!9.46e-09!44;CL:0002319!1.13e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.40e-10,70;CL:0000221,9.44e-09,44;CL:0000133,9.44e-09,44;CL:0002319,1.13e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.00e-13!73;UBERON:0005743!3.00e-13!73;UBERON:0000073!1.15e-12!75;UBERON:0001016!1.15e-12!75;UBERON:0004121!3.47e-11!102;UBERON:0000924!3.47e-11!102;UBERON:0006601!3.47e-11!102;UBERON:0009854!7.68e-10!23;UBERON:0009856!7.68e-10!23;UBERON:0002365!7.72e-10!25;UBERON:0002330!7.72e-10!25;UBERON:0002107!9.07e-10!22;UBERON:0007499!9.07e-10!22;UBERON:0006925!9.07e-10!22;UBERON:0009497!9.07e-10!22;UBERON:0000015!9.07e-10!22;UBERON:0002423!9.07e-10!22;UBERON:0006235!9.07e-10!22;UBERON:0008835!9.07e-10!22;UBERON:0003894!9.07e-10!22;UBERON:0004161!9.07e-10!22;UBERON:0008836!9.07e-10!22;UBERON:0002346!1.55e-09!71;UBERON:0003075!1.55e-09!71;UBERON:0007284!1.55e-09!71;UBERON:0005256!7.38e-09!47;UBERON:0001049!6.37e-08!52;UBERON:0005068!6.37e-08!52;UBERON:0006241!6.37e-08!52;UBERON:0007135!6.37e-08!52;UBERON:0005172!2.74e-07!49;UBERON:0005173!2.74e-07!49;UBERON:0002417!2.74e-07!49;UBERON:0000916!2.74e-07!49;UBERON:0000955!3.04e-07!50;UBERON:0006238!3.04e-07!50;UBERON:0002020!4.93e-07!34;UBERON:0002616!5.77e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-13,73;UBERON:0001016,1.15e-12,75;UBERON:0009854,7.66e-10,23;UBERON:0009856,7.66e-10,23;UBERON:0002365,7.71e-10,25;UBERON:0002330,7.71e-10,25;UBERON:0002107,9.05e-10,22;UBERON:0007499,9.05e-10,22;UBERON:0006925,9.05e-10,22;UBERON:0009497,9.05e-10,22;UBERON:0000015,9.05e-10,22;UBERON:0002423,9.05e-10,22;UBERON:0006235,9.05e-10,22;UBERON:0008835,9.05e-10,22;UBERON:0003894,9.05e-10,22;UBERON:0004161,9.05e-10,22;UBERON:0008836,9.05e-10,22;UBERON:0005256,4.18e-09,45;UBERON:0000073,1.02e-08,54;UBERON:0004121,3.83e-08,95;UBERON:0000924,3.83e-08,95;UBERON:0006601,3.83e-08,95;UBERON:0001049,6.36e-08,52;UBERON:0005068,6.36e-08,52;UBERON:0006241,6.36e-08,52;UBERON:0007135,6.36e-08,52;UBERON:0005172,2.74e-07,49;UBERON:0005173,2.74e-07,49;UBERON:0002417,2.74e-07,49;UBERON:0000916,2.74e-07,49;UBERON:0002020,4.92e-07,34 | |||
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| ||
|short_description=p1@Fads2 | |||
}} | }} |
Latest revision as of 20:21, 1 October 2015
Short description: | p1@Fads2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fads2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3168 |
Association with transcript: | 0bp_to_ENSMUST00000025567, NM_019699, uc008gpb.1, uc008gpc.1_5end |
EntrezGene: | Fads2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.40e-10 | 70 |
ectodermal cell | 9.44e-09 | 44 |
neurectodermal cell | 9.44e-09 | 44 |
neural cell | 1.13e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.99e-13 | 73 |
nervous system | 1.15e-12 | 75 |
digestive tract diverticulum | 7.66e-10 | 23 |
sac | 7.66e-10 | 23 |
exocrine gland | 7.71e-10 | 25 |
exocrine system | 7.71e-10 | 25 |
liver | 9.05e-10 | 22 |
epithelial sac | 9.05e-10 | 22 |
digestive gland | 9.05e-10 | 22 |
epithelium of foregut-midgut junction | 9.05e-10 | 22 |
anatomical boundary | 9.05e-10 | 22 |
hepatobiliary system | 9.05e-10 | 22 |
foregut-midgut junction | 9.05e-10 | 22 |
hepatic diverticulum | 9.05e-10 | 22 |
liver primordium | 9.05e-10 | 22 |
septum transversum | 9.05e-10 | 22 |
liver bud | 9.05e-10 | 22 |
trunk mesenchyme | 4.18e-09 | 45 |
regional part of nervous system | 1.02e-08 | 54 |
ectoderm-derived structure | 3.83e-08 | 95 |
ectoderm | 3.83e-08 | 95 |
presumptive ectoderm | 3.83e-08 | 95 |
neural tube | 6.36e-08 | 52 |
neural rod | 6.36e-08 | 52 |
future spinal cord | 6.36e-08 | 52 |
neural keel | 6.36e-08 | 52 |
abdomen element | 2.74e-07 | 49 |
abdominal segment element | 2.74e-07 | 49 |
abdominal segment of trunk | 2.74e-07 | 49 |
abdomen | 2.74e-07 | 49 |
gray matter | 4.92e-07 | 34 |