FFCP PHASE1:Mm9::chr6:86683212..86683250,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:86683212..86683250,-
|short_description=p2@Gmcl1
|description=CAGE_peak_2_at_Gmcl1_5end
|association_with_transcript=0bp_to_ENSMUST00000113679_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23885 | |EntrezGene=23885 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3V0Z2 | |UniProt=Q3V0Z2 | ||
|association_with_transcript=0bp_to_ENSMUST00000113679_5end | |||
|cluster_id=chr6:86683212..86683250,- | |||
|description=CAGE_peak_2_at_Gmcl1_5end | |||
|id=chr6:86683212..86683250,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.06e-08,9;CL:0002251,5.06e-08,9;CL:0000066,6.21e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!2.97e-16!99;UBERON:0002020!2.96e-09!34;UBERON:0007811!5.70e-09!86;UBERON:0001049!8.90e-08!52;UBERON:0005068!8.90e-08!52;UBERON:0006241!8.90e-08!52;UBERON:0007135!8.90e-08!52;UBERON:0000033!1.48e-07!63;UBERON:0000344!2.16e-07!15;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10;UBERON:0002791!2.47e-07!29;UBERON:0003528!2.47e-07!29;UBERON:0001893!2.47e-07!29;UBERON:0000153!2.62e-07!94;UBERON:0000955!2.81e-07!50;UBERON:0006238!2.81e-07!50;UBERON:0001242!3.58e-07!13;UBERON:0000060!3.58e-07!13;UBERON:0001262!3.58e-07!13;UBERON:0004786!3.58e-07!13;UBERON:0002616!6.40e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.48e-10,54;UBERON:0002020,3.16e-10,34;UBERON:0002021,1.24e-09,10;UBERON:0000411,1.24e-09,10;UBERON:0001950,1.24e-09,10;UBERON:0010371,1.42e-09,73;UBERON:0001242,2.22e-09,13;UBERON:0001262,2.22e-09,13;UBERON:0004786,2.22e-09,13;UBERON:0001049,3.54e-09,52;UBERON:0005068,3.54e-09,52;UBERON:0006241,3.54e-09,52;UBERON:0007135,3.54e-09,52;UBERON:0000344,8.51e-09,15;UBERON:0000485,2.01e-08,11;UBERON:0003350,5.06e-08,9;UBERON:0004808,5.06e-08,9;UBERON:0001277,5.06e-08,9;UBERON:0004121,5.60e-08,95;UBERON:0000924,5.60e-08,95;UBERON:0006601,5.60e-08,95;UBERON:0003528,1.03e-07,29;UBERON:0002791,1.03e-07,29;UBERON:0001893,1.03e-07,29;UBERON:0002346,1.35e-07,64;UBERON:0003075,1.35e-07,64;UBERON:0007284,1.35e-07,64;UBERON:0001017,2.29e-07,73;UBERON:0000955,4.49e-07,47;UBERON:0006238,4.49e-07,47;UBERON:0001016,7.46e-07,75 | |||
|phase1_expression=1.60148847104794,2.44282785347553,3.63999391511629,3.32710632437513,4.50806156951712,3.3575854382378,2.10251376535973,2.32421982194837,4.646027831005,3.27690336850791,0.513653904676515,0.319088635981346,0.684802919724823,1.48614684112296,0.666219523631325,0.202475267389826,2.09868563438444,0.315462165358238,0.959801035240171,1.69755860719212,29.254891811968,0.496454756004426,0.522399578277871,0.95995453676044,1.83527424853736,4.01962374880514,4.30761996159075,1.72376986148711,1.14014051673824,4.53654233567875,1.55211357458713,1.27006134691926,0,0,6.06588401477677,5.98444723290572,4.49172583777212,0.837063261473815,0,0,0,1.36609096991689,0.485510353031154,0.251793635951155,0.101376931219515,0.550640256485045,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,1.17447824240415,0.725362142011344,1.68046899571232,0.257259436035947,0.286533439938757,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,0.829516898467821,1.08004750665353,1.05162480675691,1.42825492201902,2.42955395046775,0.979926393719632,0.479227355091182,0.919218786610021,4.40463523997555,2.68143409978894,2.15049146558741,0.263772575460388,1.64677758484337,2.08365348222704,0.837548997004143,4.50210088025344,1.22238598221448,4.41942878210502,2.56269025438385,2.42319279572891,0.302904773332736,0.226714680320357,1.44932244350839,0,1.3599426674155,1.07940638327563,0,0,3.08977724289854,0.170430322578058,0.259786004602869,0,1.26759077799012,1.28326477414318,0,0,0.865964164044856,1.26679932737549,0,5.48082622651488,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.376999773989026,1.48316980640624,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,3.72783522436244,4.9772735491963,5.02672096352292,1.78819938646014,1.07833612055328,1.19980546198682,0.635351135365324,1.19832511523858,2.74500361691176,2.1361239859187,2.60736480288415,3.83573185995496,3.53239675751252,2.43361894601636,0.203678727700633,0.870848794270651,1.26361379216837,1.26265113531884,0.260240885925407,0.229902104433473,0.360124259610698,1.20563854268572,0.95251098811859,0.896796041993948,1.21812241927647,2.84573707812917,0.215567992932842,0.378212160335639,0.527853372491847,0.43839146485515,0.278047249225598,0.696504333044333,0,0.398068533636986,1.40442637462647,1.80143534980301,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,1.39520366850245,0.804820204198858,0.817357396570186,0.329119699826961,0.492502392237286,0.162137619091711,0.292399974850665,0.439100230582101,0,2.3131894342054,1.23485534855141,1.65209391491899,1.05780226665418,0.426576501070468,0.232236671860439,0.644337306610467,0.403367049246685,0.667134131534611,0.570676878337677,1.89811624617805,1.15289268306808,0.754005626400808,0.994782360205754,0.974820435595601,0,0.864552199498777,2.38969527905241,0.189667900953082,0.228497025219458,2.25415471346161,1.01825663922657,0.581857461502877,0.49095073923223,0.569128834118316,0.442830443938806,0.627994911365499,0.493588655687202,0.296452627087149,0.83422552858047,0.393117990226406,1.57403478669398,0.405720242777006,0.482354319504834,0.50925170356284,0.863088412352432,0,0,1.43768206527355,0,0,0.505157755894224,0.179397413521912,0.964887042726734,0.554259570499814,0.37898282354097,0.977789858652155,0.339490171550376,0.234690248288502,0.167506257441816,0,0.585400943573396,0.472905432318573,0.221464689648775,0.159454768657487,0,0.518054945597687,0.433947175744535,0,0,0,0,1.12385412991454,1.87538698547525,0.819674726883377,0,0.631016438832513,0.780877488593277,0.430846795465598,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,2.57057053137446,0.283880170416537,0.178065603667255,0.162886959353576,0,0,1.45668381692989,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,0.516856586336442,0.727067458955011,0,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.428674070063185,0.709360934569094,0.535106452806212,0,0.304464949114599,0,1.27099242518292,0.882113592219848,2.63818004706368,1.29171541356724,2.11095237248546,3.10368094408155,3.11867709515616,1.7488850197791,1.8542530201051,0.170870880797853,0.412773735926445,0.370389054739423,0.376736914009382,0.956859594047176,1.14389086603261,0.679913719975421,0.69975726161829,0.690999869022119,0,0.316335993581135,0,0.86404272657441,0.627264888043406,0.218362563746178,1.21377911746339,0.661227645802687,1.04702376793612,4.27729411862916,0.621339313086926,215.894395516045,0.149516546043979,0.330916980914195,0.194451188344048,0,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,112.336616184093,102.250652221542,2.52808896502543,0.202725215290164,0.513554785824136,0.389762468933385,0.179026695667481,1.19208812868759,1.80293174279953,1.9199638532695,2.01932899896295,1.82896335972,1.71404514732629,2.0466154955348,2.40529604100824,1.8700304349051,0.680191150845634,0,0.26914156982842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| ||
|short_description=p2@Gmcl1 | |||
}} | }} |
Latest revision as of 20:35, 1 October 2015
Short description: | p2@Gmcl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gmcl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000113679_5end |
EntrezGene: | Gmcl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.06e-08 | 9 |
epithelial cell of alimentary canal | 5.06e-08 | 9 |
epithelial cell | 6.21e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.48e-10 | 54 |
gray matter | 3.16e-10 | 34 |
occipital lobe | 1.24e-09 | 10 |
visual cortex | 1.24e-09 | 10 |
neocortex | 1.24e-09 | 10 |
ecto-epithelium | 1.42e-09 | 73 |
intestinal mucosa | 2.22e-09 | 13 |
wall of intestine | 2.22e-09 | 13 |
gastrointestinal system mucosa | 2.22e-09 | 13 |
neural tube | 3.54e-09 | 52 |
neural rod | 3.54e-09 | 52 |
future spinal cord | 3.54e-09 | 52 |
neural keel | 3.54e-09 | 52 |
mucosa | 8.51e-09 | 15 |
simple columnar epithelium | 2.01e-08 | 11 |
epithelium of mucosa | 5.06e-08 | 9 |
gastrointestinal system epithelium | 5.06e-08 | 9 |
intestinal epithelium | 5.06e-08 | 9 |
ectoderm-derived structure | 5.60e-08 | 95 |
ectoderm | 5.60e-08 | 95 |
presumptive ectoderm | 5.60e-08 | 95 |
brain grey matter | 1.03e-07 | 29 |
regional part of telencephalon | 1.03e-07 | 29 |
telencephalon | 1.03e-07 | 29 |
neurectoderm | 1.35e-07 | 64 |
neural plate | 1.35e-07 | 64 |
presumptive neural plate | 1.35e-07 | 64 |
central nervous system | 2.29e-07 | 73 |
brain | 4.49e-07 | 47 |
future brain | 4.49e-07 | 47 |
nervous system | 7.46e-07 | 75 |