FFCP PHASE1:Mm9::chr2:10002227..10002245,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:10002227..10002245,+ to FFCP PHASE1:Mm9::chr2:10002227..10002245,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16588 | |EntrezGene=16588 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=298 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K339 | |UniProt=Q8K339 | ||
|association_with_transcript=0bp_to_NM_025280,uc008iho.1,uc008ihp.1,uc012bpd.1_5end | |||
|cluster_id=chr2:10002227..10002245,+ | |||
|description=CAGE_peak_1_at_Kin_5end | |||
|id=chr2:10002227..10002245,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.47e-07!13;CL:0000051!1.47e-07!13;CL:0000838!4.75e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.47e-07,13;CL:0000051,1.47e-07,13;CL:0000838,4.75e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!3.04e-09!41;UBERON:0001004!1.02e-08!42;UBERON:0002370!1.55e-07!23;UBERON:0000974!1.55e-07!23;UBERON:0004807!1.55e-07!23;UBERON:0005058!1.55e-07!23;UBERON:0003351!1.55e-07!23;UBERON:0009113!1.55e-07!23;UBERON:0003295!1.55e-07!23;UBERON:0009722!1.55e-07!23;UBERON:0005562!1.55e-07!23;UBERON:0007690!1.55e-07!23;UBERON:0004177!2.77e-07!29;UBERON:0003408!6.87e-07!24;UBERON:0006562!8.21e-07!24;UBERON:0001557!8.21e-07!24;UBERON:0001042!8.21e-07!24;UBERON:0008814!8.21e-07!24;UBERON:0009145!8.21e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.99e-09,41;UBERON:0001004,1.01e-08,42;UBERON:0000153,6.93e-08,43;UBERON:0002370,1.52e-07,23;UBERON:0000974,1.52e-07,23;UBERON:0004807,1.52e-07,23;UBERON:0005058,1.52e-07,23;UBERON:0003351,1.52e-07,23;UBERON:0009113,1.52e-07,23;UBERON:0003295,1.52e-07,23;UBERON:0009722,1.52e-07,23;UBERON:0005562,1.52e-07,23;UBERON:0007690,1.52e-07,23;UBERON:0007811,2.19e-07,36;UBERON:0004177,2.72e-07,29;UBERON:0005057,2.72e-07,29;UBERON:0003408,6.74e-07,24;UBERON:0006562,8.06e-07,24;UBERON:0001557,8.06e-07,24;UBERON:0001042,8.06e-07,24;UBERON:0008814,8.06e-07,24;UBERON:0009145,8.06e-07,24 | |||
|phase1_expression=9.12848428497326,7.67745896806594,5.91499011206397,6.95667686005709,5.50985302940982,5.70789524500425,5.84031601488814,17.0442786942881,20.1327872676883,17.0867104215055,14.5535272991679,11.9658238493005,24.4817043801624,25.0022350918333,7.66152452176024,9.11138703254217,11.8925519281785,19.4009231695316,18.921791837592,15.2780274647291,7.65389611359628,15.3900974361372,14.6271881917804,6.23970448894286,6.8822784320151,4.01962374880514,2.58457197695445,6.67960821326256,6.08074942260396,4.78857246543868,6.87364583031445,5.08024538767705,3.69038872550742,0,2.02196133825892,3.82339684324532,4.28755648150975,24.2748345827406,21.0960543021426,25.1291397107423,38.8232782100469,25.9557284284209,21.3624555333708,10.3235390739973,10.44182391561,12.8482726513177,4.69434806608824,0.872100625521786,1.09843091367236,0.972149495371417,1.81982348112971,2.87505128729943,24.831825696545,30.4652099644765,37.3064117048135,5.40244815675489,5.44413535883638,6.18806510732931,6.67644320836673,6.34789175126439,6.97214543856797,2.71075625655306,2.66788438833342,2.6996991518442,0.988866362566974,0,0.599200221036809,2.68952813725088,10.2652716185393,7.1553147315796,6.52007380189284,2.85650984403804,4.41737081903227,10.534208732486,8.72193786265951,13.7882817991503,4.40463523997555,6.00130489000382,8.29475279583715,6.72620067423989,6.22115976496386,8.33461392890816,5.862842979029,11.2552522006336,5.65353516774197,3.53554302568401,7.68807076315156,9.31997229126503,10.6016670666458,10.8823046553771,12.1743085254705,4.30211938490693,6.79971333707751,4.85732872474035,5.84798775702902,7.16843019355737,10.3928870897496,8.18065548374677,7.79358013808606,9.18682893726885,9.01397886570755,8.98285341900225,5.09610479413291,0,9.74209684550464,6.08063677140237,6.0662933401774,8.79215873836762,37.5459931288399,9.20341262201914,7.98032503124225,6.69824052286711,8.07154240396205,8.44046787094686,12.8171690777918,9.17366116706631,13.3485282576562,14.749134405831,10.6153266233985,12.1325137460557,8.61281921995535,10.1823803158397,7.45567044872489,12.0040126774734,14.0329293565015,5.10914110417183,15.6957813102756,7.7987355029143,13.3423738426718,9.73639156131348,8.23501085073528,15.4554853098823,8.34356736922927,10.2286182932132,7.48036960414416,13.6282660976916,12.220723662038,10.4501855312478,8.59257378674494,5.6819301089348,16.265055370338,16.5529515192101,16.2055916824814,14.6183673300644,17.009124787832,17.8078071195941,12.5560310910037,10.8655415710387,9.05385570317937,15.695804653929,13.5482365606241,11.836569551089,11.3999372182495,11.4923214952315,10.7006710932131,13.5343301436575,8.42655824775882,12.8673953557358,9.94572247884574,11.1847917169171,11.2572508790926,10.9837857491219,14.4414288706978,10.4285042826124,11.5700334665534,7.90615412151387,6.43856163359086,10.8591768401468,10.0381508447223,14.6109043030395,11.6739085746032,8.77199924551994,11.1970558798436,11.4075455946316,10.0939175310781,20.0663994139605,6.93879444265976,7.40461586657924,18.5560777965654,15.7920936865098,9.92279452180119,11.8993279527772,9.11749979763968,7.60902504450237,6.64340686162316,7.24675400785648,6.78605063760728,7.16243299348143,9.74820435595601,3.59527763461689,5.40345124686736,8.36393347668342,9.48339504765408,13.8240700257772,19.1603150644237,11.8117770150282,10.6673867942194,12.4841759404767,13.0899631847213,8.85660887877613,9.73392112616524,9.74837594982224,8.89357881261447,10.1775514486817,8.25547779475453,12.1425540687821,9.94014594803664,11.3353265083636,7.89340140522401,8.63088412352432,14.5921704097532,6.86403532970204,7.18841032636773,8.93138274404408,7.80094182786401,6.56705082662491,4.66433275156972,9.16642690590398,15.1497615936616,14.9698215298683,17.1113225264127,12.3913912615887,15.0201758904641,14.0705256251125,16.663054862021,15.6106918286239,15.2906089783005,14.8381342064679,16.9022054776936,10.1595255123758,13.296743603674,13.5970115066621,16.5870412333199,3.26343410291226,6.39293554924747,9.93372286697037,7.54587772942622,11.7211686592203,10.4918365041072,9.3414243065618,14.1978698737316,7.41833614163613,9.90947629570875,15.5329718669159,11.1399337041197,8.49229592366497,12.1443210502468,11.6902343164525,18.1832377855401,16.708708453934,13.7681882652021,13.8891170860459,12.0536349921646,13.5275500837479,6.63725691699814,11.8962511715941,12.09294227859,9.43025398779491,7.38254732201932,10.4527950300935,11.62927319257,13.4507479906677,9.9819265947722,7.58488219045958,6.32511651449993,9.28219889233682,18.7241783164583,12.9643987702543,8.40831444587904,10.7168517515796,13.8325382240973,14.6262430433698,11.8475294833527,10.656273219011,9.62154003061212,11.6507638975101,6.17479514553893,7.74965388824956,12.4327608555847,10.7960135621399,9.19167048824151,8.53532678674319,6.41257840585672,10.3838169125885,10.2522528478712,9.49379592630823,10.926477114813,12.6206866193143,14.4895881384287,10.066239621087,19.3775410192995,18.3336402543992,15.0637971446822,12.4107180341965,13.7606157207794,15.8589184358942,12.2046035128635,9.61806161666556,8.51613998610093,7.01294601201068,10.1663750542163,7.32916637555283,9.20266310371729,7.45607175704311,6.76431526421028,12.4098733216502,11.913011312911,10.5003641705786,7.74958940866387,9.2925869019928,13.378725205616,12.3694165601753,13.2122773976396,10.8712854371703,8.92893019399383,23.068811805857,9.12263468805739,11.7090491167903,17.4093902790245,22.7363903497701,27.8153896693771,21.5149854640744,21.4149814403137,27.4628743858962,25.1482461961499,26.6181128761259,23.1949756160611,25.688561717968,34.9461937522891,6.80191150845634,8.21348027484039,10.4068073666992,9.73730774911655,11.204996453867,8.63339387075437,9.70703608616505,6.64541975145104,4.01257683228291,10.7302850097243,9.20650473014354,10.8850147553485,8.93636548187176,4.11049511862385,6.7985450765073,10.1253375034771,13.0593148935024,14.0474146785103,4.65984280576638,14.115079271448,13.5668456956351,15.0245573063638,11.9122291363464,11.1094976192831,7.90527086335061,10.0011027510727,8.85950746127245,10.9112531261217,10.3605856823157,7.85785829659743,11.3175804831646,8.80230170216895,11.268426823257,10.0512070672323,10.4784612082276,9.85016770531272,10.6100071255038,15.6592642305257,12.3647092912894,7.54312355247914,9.76116933876356,9.29901140794552,10.174249164263,11.5754537910857,7.44608549446753,10.426894453748,12.1012067261408,11.5433496768983,5.61142271657738,8.30445126869219,10.145961684683,7.7753898202241,8.05671574167023,11.7673032698496,9.242991383704,10.292990771598,9.66919743217342,8.99055160723564,8.82365676478062,10.434052602919 | |phase1_expression=9.12848428497326,7.67745896806594,5.91499011206397,6.95667686005709,5.50985302940982,5.70789524500425,5.84031601488814,17.0442786942881,20.1327872676883,17.0867104215055,14.5535272991679,11.9658238493005,24.4817043801624,25.0022350918333,7.66152452176024,9.11138703254217,11.8925519281785,19.4009231695316,18.921791837592,15.2780274647291,7.65389611359628,15.3900974361372,14.6271881917804,6.23970448894286,6.8822784320151,4.01962374880514,2.58457197695445,6.67960821326256,6.08074942260396,4.78857246543868,6.87364583031445,5.08024538767705,3.69038872550742,0,2.02196133825892,3.82339684324532,4.28755648150975,24.2748345827406,21.0960543021426,25.1291397107423,38.8232782100469,25.9557284284209,21.3624555333708,10.3235390739973,10.44182391561,12.8482726513177,4.69434806608824,0.872100625521786,1.09843091367236,0.972149495371417,1.81982348112971,2.87505128729943,24.831825696545,30.4652099644765,37.3064117048135,5.40244815675489,5.44413535883638,6.18806510732931,6.67644320836673,6.34789175126439,6.97214543856797,2.71075625655306,2.66788438833342,2.6996991518442,0.988866362566974,0,0.599200221036809,2.68952813725088,10.2652716185393,7.1553147315796,6.52007380189284,2.85650984403804,4.41737081903227,10.534208732486,8.72193786265951,13.7882817991503,4.40463523997555,6.00130489000382,8.29475279583715,6.72620067423989,6.22115976496386,8.33461392890816,5.862842979029,11.2552522006336,5.65353516774197,3.53554302568401,7.68807076315156,9.31997229126503,10.6016670666458,10.8823046553771,12.1743085254705,4.30211938490693,6.79971333707751,4.85732872474035,5.84798775702902,7.16843019355737,10.3928870897496,8.18065548374677,7.79358013808606,9.18682893726885,9.01397886570755,8.98285341900225,5.09610479413291,0,9.74209684550464,6.08063677140237,6.0662933401774,8.79215873836762,37.5459931288399,9.20341262201914,7.98032503124225,6.69824052286711,8.07154240396205,8.44046787094686,12.8171690777918,9.17366116706631,13.3485282576562,14.749134405831,10.6153266233985,12.1325137460557,8.61281921995535,10.1823803158397,7.45567044872489,12.0040126774734,14.0329293565015,5.10914110417183,15.6957813102756,7.7987355029143,13.3423738426718,9.73639156131348,8.23501085073528,15.4554853098823,8.34356736922927,10.2286182932132,7.48036960414416,13.6282660976916,12.220723662038,10.4501855312478,8.59257378674494,5.6819301089348,16.265055370338,16.5529515192101,16.2055916824814,14.6183673300644,17.009124787832,17.8078071195941,12.5560310910037,10.8655415710387,9.05385570317937,15.695804653929,13.5482365606241,11.836569551089,11.3999372182495,11.4923214952315,10.7006710932131,13.5343301436575,8.42655824775882,12.8673953557358,9.94572247884574,11.1847917169171,11.2572508790926,10.9837857491219,14.4414288706978,10.4285042826124,11.5700334665534,7.90615412151387,6.43856163359086,10.8591768401468,10.0381508447223,14.6109043030395,11.6739085746032,8.77199924551994,11.1970558798436,11.4075455946316,10.0939175310781,20.0663994139605,6.93879444265976,7.40461586657924,18.5560777965654,15.7920936865098,9.92279452180119,11.8993279527772,9.11749979763968,7.60902504450237,6.64340686162316,7.24675400785648,6.78605063760728,7.16243299348143,9.74820435595601,3.59527763461689,5.40345124686736,8.36393347668342,9.48339504765408,13.8240700257772,19.1603150644237,11.8117770150282,10.6673867942194,12.4841759404767,13.0899631847213,8.85660887877613,9.73392112616524,9.74837594982224,8.89357881261447,10.1775514486817,8.25547779475453,12.1425540687821,9.94014594803664,11.3353265083636,7.89340140522401,8.63088412352432,14.5921704097532,6.86403532970204,7.18841032636773,8.93138274404408,7.80094182786401,6.56705082662491,4.66433275156972,9.16642690590398,15.1497615936616,14.9698215298683,17.1113225264127,12.3913912615887,15.0201758904641,14.0705256251125,16.663054862021,15.6106918286239,15.2906089783005,14.8381342064679,16.9022054776936,10.1595255123758,13.296743603674,13.5970115066621,16.5870412333199,3.26343410291226,6.39293554924747,9.93372286697037,7.54587772942622,11.7211686592203,10.4918365041072,9.3414243065618,14.1978698737316,7.41833614163613,9.90947629570875,15.5329718669159,11.1399337041197,8.49229592366497,12.1443210502468,11.6902343164525,18.1832377855401,16.708708453934,13.7681882652021,13.8891170860459,12.0536349921646,13.5275500837479,6.63725691699814,11.8962511715941,12.09294227859,9.43025398779491,7.38254732201932,10.4527950300935,11.62927319257,13.4507479906677,9.9819265947722,7.58488219045958,6.32511651449993,9.28219889233682,18.7241783164583,12.9643987702543,8.40831444587904,10.7168517515796,13.8325382240973,14.6262430433698,11.8475294833527,10.656273219011,9.62154003061212,11.6507638975101,6.17479514553893,7.74965388824956,12.4327608555847,10.7960135621399,9.19167048824151,8.53532678674319,6.41257840585672,10.3838169125885,10.2522528478712,9.49379592630823,10.926477114813,12.6206866193143,14.4895881384287,10.066239621087,19.3775410192995,18.3336402543992,15.0637971446822,12.4107180341965,13.7606157207794,15.8589184358942,12.2046035128635,9.61806161666556,8.51613998610093,7.01294601201068,10.1663750542163,7.32916637555283,9.20266310371729,7.45607175704311,6.76431526421028,12.4098733216502,11.913011312911,10.5003641705786,7.74958940866387,9.2925869019928,13.378725205616,12.3694165601753,13.2122773976396,10.8712854371703,8.92893019399383,23.068811805857,9.12263468805739,11.7090491167903,17.4093902790245,22.7363903497701,27.8153896693771,21.5149854640744,21.4149814403137,27.4628743858962,25.1482461961499,26.6181128761259,23.1949756160611,25.688561717968,34.9461937522891,6.80191150845634,8.21348027484039,10.4068073666992,9.73730774911655,11.204996453867,8.63339387075437,9.70703608616505,6.64541975145104,4.01257683228291,10.7302850097243,9.20650473014354,10.8850147553485,8.93636548187176,4.11049511862385,6.7985450765073,10.1253375034771,13.0593148935024,14.0474146785103,4.65984280576638,14.115079271448,13.5668456956351,15.0245573063638,11.9122291363464,11.1094976192831,7.90527086335061,10.0011027510727,8.85950746127245,10.9112531261217,10.3605856823157,7.85785829659743,11.3175804831646,8.80230170216895,11.268426823257,10.0512070672323,10.4784612082276,9.85016770531272,10.6100071255038,15.6592642305257,12.3647092912894,7.54312355247914,9.76116933876356,9.29901140794552,10.174249164263,11.5754537910857,7.44608549446753,10.426894453748,12.1012067261408,11.5433496768983,5.61142271657738,8.30445126869219,10.145961684683,7.7753898202241,8.05671574167023,11.7673032698496,9.242991383704,10.292990771598,9.66919743217342,8.99055160723564,8.82365676478062,10.434052602919 | ||
|short_description=p1@Kin | |||
}} | }} |
Latest revision as of 20:52, 1 October 2015
Short description: | p1@Kin |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kin_5end |
Coexpression cluster: | MCL_coexpression_mm9:298 |
Association with transcript: | 0bp_to_NM_025280, uc008iho.1, uc008ihp.1, uc012bpd.1_5end |
EntrezGene: | Kin |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.47e-07 | 13 |
common lymphoid progenitor | 1.47e-07 | 13 |
lymphoid lineage restricted progenitor cell | 4.75e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
respiratory tract | 2.99e-09 | 41 |
respiratory system | 1.01e-08 | 42 |
anterior region of body | 6.93e-08 | 43 |
thymus | 1.52e-07 | 23 |
neck | 1.52e-07 | 23 |
respiratory system epithelium | 1.52e-07 | 23 |
hemolymphoid system gland | 1.52e-07 | 23 |
pharyngeal epithelium | 1.52e-07 | 23 |
thymic region | 1.52e-07 | 23 |
pharyngeal gland | 1.52e-07 | 23 |
entire pharyngeal arch endoderm | 1.52e-07 | 23 |
thymus primordium | 1.52e-07 | 23 |
early pharyngeal endoderm | 1.52e-07 | 23 |
craniocervical region | 2.19e-07 | 36 |
hemopoietic organ | 2.72e-07 | 29 |
immune organ | 2.72e-07 | 29 |
gland of gut | 6.74e-07 | 24 |
pharynx | 8.06e-07 | 24 |
upper respiratory tract | 8.06e-07 | 24 |
chordate pharynx | 8.06e-07 | 24 |
pharyngeal arch system | 8.06e-07 | 24 |
pharyngeal region of foregut | 8.06e-07 | 24 |