FFCP PHASE1:Mm9::chrX:50265409..50265538,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70998 | |EntrezGene=70998 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=770 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D4J7,E9QAG2 | |UniProt=Q9D4J7,E9QAG2 | ||
|association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST00000101587,ENSMUST00000154864,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000078944,ENSMUST00000101587,ENSMUST00000154864,NM_027642,uc009ten.1,uc009teo.1,uc009tep.1,uc009teq.1_5end | ||
|cluster_id=chrX:50265409..50265538,+ | |||
|description=CAGE_peak_1_at_Phf6_5end | |description=CAGE_peak_1_at_Phf6_5end | ||
|id=chrX:50265409..50265538,+ | |id=chrX:50265409..50265538,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.42e-08!13;CL:0000051!3.42e-08!13;CL:0000838!1.38e-07!12;CL:0000084!2.05e-07!11;CL:0000827!2.05e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.42e-08,13;CL:0000051,3.42e-08,13;CL:0000838,1.38e-07,12;CL:0000084,2.05e-07,11;CL:0000827,2.05e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.07e-09!94;UBERON:0004177!8.67e-08!29;UBERON:0002370!1.25e-07!23;UBERON:0000974!1.25e-07!23;UBERON:0004807!1.25e-07!23;UBERON:0005058!1.25e-07!23;UBERON:0003351!1.25e-07!23;UBERON:0009113!1.25e-07!23;UBERON:0003295!1.25e-07!23;UBERON:0009722!1.25e-07!23;UBERON:0005562!1.25e-07!23;UBERON:0007690!1.25e-07!23;UBERON:0007811!2.59e-07!86;UBERON:0003408!5.10e-07!24;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.29e-10,43;UBERON:0007811,2.78e-08,36;UBERON:0004177,8.67e-08,29;UBERON:0005057,8.67e-08,29;UBERON:0002370,1.25e-07,23;UBERON:0000974,1.25e-07,23;UBERON:0004807,1.25e-07,23;UBERON:0005058,1.25e-07,23;UBERON:0003351,1.25e-07,23;UBERON:0009113,1.25e-07,23;UBERON:0003295,1.25e-07,23;UBERON:0009722,1.25e-07,23;UBERON:0005562,1.25e-07,23;UBERON:0007690,1.25e-07,23;UBERON:0003408,5.10e-07,24;UBERON:0006562,5.30e-07,24;UBERON:0001557,5.30e-07,24;UBERON:0001042,5.30e-07,24;UBERON:0008814,5.30e-07,24;UBERON:0009145,5.30e-07,24 | |||
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|phase1_expression=27.5456017020246,3.83872948403297,1.81999695755814,3.32710632437513,2.00358291978539,7.89032577985882,9.81173090501208,30.473104332212,200.060774177518,160.568265056888,86.9787278585565,82.1653237651965,32.1857372270667,32.870071309543,18.9872564234928,21.2599030759317,32.8794082720229,31.7039476185029,37.0208970735495,22.9170411970936,19.3898701544439,39.4185076267515,38.3963690034235,14.5593104742,10.5528269290898,4.59385571292016,5.1691439539089,8.18790684206378,9.69119439227507,9.07308467135751,6.87364583031445,6.35030673459631,9.22597181376855,0,14.731432607315,13.2987716286794,11.4334839506927,10.8818223991596,7.813353445238,20.9409497589519,11.1763982725893,12.9778642142105,16.0218416500281,14.1004436132647,13.3817549209759,13.5824596599644,3.9119567217402,5.01457859675027,3.51497892375155,6.41618666945135,6.43937539476668,5.75010257459886,26.3418691510646,37.7188313845899,39.6590682988108,9.51859913333004,4.87106847895886,7.73508138416164,27.7173551377649,20.6306481916093,20.2826049121977,2.37191172448392,5.33576877666684,2.6996991518442,0,0,2.39680088414724,2.68952813725088,50.4968411942286,29.8363123713036,34.703618622978,8.85518051651791,9.718215801871,45.8115589063928,29.0411777185256,22.9804696652505,15.4162233399144,13.5348578370299,13.9781945263182,26.7729164092293,26.7143919319036,43.7567231267678,12.8424179540635,12.9435400307286,17.5717984943332,22.6864010814724,31.7488848182,37.0934897192348,26.3527152799481,26.072188236841,12.1743085254705,8.60423876981386,2.719885334831,6.47643829965381,7.14754059192436,4.03224198387602,9.97155382935438,24.5419664512403,17.4056623083922,15.1936017039446,19.858922188512,6.41632387071589,5.09610479413291,0,13.6389355837065,15.9616715249312,15.6712577954583,10.6191008138726,36.7691794778984,17.5161724096493,22.5530924795977,11.5696881758614,12.2226213545711,15.3737093363675,13.4051126134703,16.8393232381765,5.6854842578906,6.79616977523585,6.19227386364912,11.9707468961083,12.5879665522424,11.6370060752453,9.31958806090611,17.5668478206928,14.4518227701284,13.7946809812639,28.3961845079031,14.3976655438418,28.5908010914396,21.7196427136993,16.4700217014706,55.5392236338861,22.4233373048037,20.4572365864264,13.9217989854905,17.8465389374533,27.8021463311363,18.2878246796837,27.2940579108369,9.25944165900485,52.1782976280442,33.3358051428536,36.7326744802912,32.250831016843,31.3648261087621,36.1280691203276,26.9860966732019,11.1242449417777,51.3051823180164,55.5971875693389,48.7384613934138,29.8106196101502,30.3071501655902,17.7608604926305,21.6071243228341,35.4280994936918,18.9597560574573,16.9849618695712,20.4597719564827,18.2270679831242,20.6382932783365,15.1252131627252,19.176323582402,12.0026181365916,12.1871019181029,12.3242990717716,14.7550370769791,8.52386999280337,12.5065485934245,10.8350526292203,8.02581214503972,9.64919917007193,9.22110484222413,8.45500438190342,20.6084149592845,53.4074938248486,2.97376904685418,7.1401652999157,46.0702621156105,36.4611574820889,21.7786009634338,17.9498336914775,13.5650606745371,16.3594038456801,16.6085171540579,10.8701310117847,9.80207314321051,10.7436494902221,11.8928093142663,11.6846523125049,8.42938394511308,10.1562049359727,12.1387456609972,32.2180805559435,34.9393980586549,24.2345080135924,22.8863934857798,19.2172146499473,21.5004226222475,15.941895981797,16.0138702398202,11.4759362447274,9.19003143970162,15.6834399373128,14.1522476481506,14.6160373050155,15.4173692255262,13.2647437863829,10.6942857748196,12.6586300478357,8.75530224585191,12.6298250066517,8.62609239164127,9.30352369171258,9.36113019343682,10.3557339958316,13.6342034276653,8.68398338454061,18.1058126363273,33.3504884716053,36.9930496523399,37.1741737847662,23.4690248288502,22.4458384972033,15.7108802984769,15.0252908850505,15.6058792665129,19.710357378741,17.8589340896386,12.9452018625433,20.2041428783098,12.2951699794285,7.53956419696361,8.15858525728064,13.277635371514,9.3818493743609,17.9816660786327,16.175212749724,25.9017213695147,7.06918596172244,24.2941328950518,26.5498346121714,31.2363926712558,25.3306925829705,23.8394581268162,24.6276581786284,26.717506310543,19.5811424800579,22.9266911208984,21.2072068838393,14.6198287764517,18.6968883850618,21.3381916753185,19.9613848796768,1.32745138339963,19.6652315285535,21.1626489875326,13.7681708221806,3.2483208216885,15.0643222492524,8.78656196771952,14.5413491791002,16.3988794056972,13.5895805912401,8.4334886859999,6.18813259489121,18.7241783164583,43.7548458496084,14.6175312674513,24.0057479235383,21.8128487379996,19.7989387538298,23.0368628842969,7.61162372786498,5.39744928546534,2.75381692122966,9.04166432025344,9.8931751764888,11.948367575497,19.8429523013633,17.0702451924485,16.4140899745061,9.91034844541493,14.0923229527987,18.7957968877638,21.0514605322487,21.6677597022563,20.5321618135113,22.1444648908061,19.6749228957609,32.2959016988325,32.0488825821177,32.0623939226263,8.59203556213602,43.9707031077778,21.1452245811923,27.5413619095593,18.1906817532588,15.7221045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| ||
|short_description=p1@Phf6 | |short_description=p1@Phf6 | ||
}} | }} |
Latest revision as of 21:35, 1 October 2015
Short description: | p1@Phf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:770 |
Association with transcript: | 0bp_to_ENSMUST00000078944, ENSMUST00000101587, ENSMUST00000154864, NM_027642, uc009ten.1, uc009teo.1, uc009tep.1, uc009teq.1_5end |
EntrezGene: | Phf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.42e-08 | 13 |
common lymphoid progenitor | 3.42e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.38e-07 | 12 |
T cell | 2.05e-07 | 11 |
pro-T cell | 2.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.29e-10 | 43 |
craniocervical region | 2.78e-08 | 36 |
hemopoietic organ | 8.67e-08 | 29 |
immune organ | 8.67e-08 | 29 |
thymus | 1.25e-07 | 23 |
neck | 1.25e-07 | 23 |
respiratory system epithelium | 1.25e-07 | 23 |
hemolymphoid system gland | 1.25e-07 | 23 |
pharyngeal epithelium | 1.25e-07 | 23 |
thymic region | 1.25e-07 | 23 |
pharyngeal gland | 1.25e-07 | 23 |
entire pharyngeal arch endoderm | 1.25e-07 | 23 |
thymus primordium | 1.25e-07 | 23 |
early pharyngeal endoderm | 1.25e-07 | 23 |
gland of gut | 5.10e-07 | 24 |
pharynx | 5.30e-07 | 24 |
upper respiratory tract | 5.30e-07 | 24 |
chordate pharynx | 5.30e-07 | 24 |
pharyngeal arch system | 5.30e-07 | 24 |
pharyngeal region of foregut | 5.30e-07 | 24 |