FFCP PHASE1:Mm9::chr2:105523171..105523175,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18508|HGNC=|MCL_coexpression_id=53|UniProt=|association_with_transcript=479bp_to_ENSMUST00000154643_5end|description=CAGE_peak_24_at_Pax6_5end|id=chr2:105523171..105523175,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!9.48e-22!9;UBERON:0000019!9.48e-22!9;UBERON:0000047!9.48e-22!9;UBERON:0004088!9.48e-22!9;UBERON:0002104!9.48e-22!9;UBERON:0001456!9.48e-22!9;UBERON:0003072!9.48e-22!9;UBERON:0003071!9.48e-22!9;UBERON:0004128!9.48e-22!9;UBERON:0003056!5.16e-18!49;UBERON:0001444!1.51e-17!11;UBERON:0000033!1.30e-16!63;UBERON:0000020!5.70e-16!12;UBERON:0001032!5.70e-16!12;UBERON:0004456!5.70e-16!12;UBERON:0005085!1.23e-14!13;UBERON:0002346!1.21e-12!71;UBERON:0003075!1.21e-12!71;UBERON:0007284!1.21e-12!71;UBERON:0007811!5.72e-11!86;UBERON:0000153!1.18e-09!94;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0000955!4.32e-07!50;UBERON:0006238!4.32e-07!50;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.33e-31,9;UBERON:0000019,1.33e-31,9;UBERON:0000047,1.33e-31,9;UBERON:0010312,1.33e-31,9;UBERON:0004088,1.33e-31,9;UBERON:0002104,1.33e-31,9;UBERON:0001456,1.33e-31,9;UBERON:0003072,1.33e-31,9;UBERON:0004128,1.33e-31,9;UBERON:0003071,1.33e-31,9;UBERON:0001444,5.07e-26,11;UBERON:0000020,6.33e-24,12;UBERON:0001032,6.33e-24,12;UBERON:0004456,6.33e-24,12;UBERON:0000033,3.77e-22,13;UBERON:0005085,3.77e-22,13;UBERON:0007811,1.91e-08,36;UBERON:0000153,3.65e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0.689706313300419,0.180062129805349,2.41127708537144,1.97305847538851,1.40925092313335,1.21812241927647,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p24@Pax6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18508 | |||
|HGNC= | |||
|MCL_coexpression_id=53 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=479bp_to_ENSMUST00000154643_5end | |||
|cluster_id=chr2:105523171..105523175,+ | |||
|description=CAGE_peak_24_at_Pax6_5end | |||
|id=chr2:105523171..105523175,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!9.48e-22!9;UBERON:0000019!9.48e-22!9;UBERON:0000047!9.48e-22!9;UBERON:0004088!9.48e-22!9;UBERON:0002104!9.48e-22!9;UBERON:0001456!9.48e-22!9;UBERON:0003072!9.48e-22!9;UBERON:0003071!9.48e-22!9;UBERON:0004128!9.48e-22!9;UBERON:0003056!5.16e-18!49;UBERON:0001444!1.51e-17!11;UBERON:0000033!1.30e-16!63;UBERON:0000020!5.70e-16!12;UBERON:0001032!5.70e-16!12;UBERON:0004456!5.70e-16!12;UBERON:0005085!1.23e-14!13;UBERON:0002346!1.21e-12!71;UBERON:0003075!1.21e-12!71;UBERON:0007284!1.21e-12!71;UBERON:0007811!5.72e-11!86;UBERON:0000153!1.18e-09!94;UBERON:0004121!1.51e-08!102;UBERON:0000924!1.51e-08!102;UBERON:0006601!1.51e-08!102;UBERON:0000955!4.32e-07!50;UBERON:0006238!4.32e-07!50;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.33e-31,9;UBERON:0000019,1.33e-31,9;UBERON:0000047,1.33e-31,9;UBERON:0010312,1.33e-31,9;UBERON:0004088,1.33e-31,9;UBERON:0002104,1.33e-31,9;UBERON:0001456,1.33e-31,9;UBERON:0003072,1.33e-31,9;UBERON:0004128,1.33e-31,9;UBERON:0003071,1.33e-31,9;UBERON:0001444,5.07e-26,11;UBERON:0000020,6.33e-24,12;UBERON:0001032,6.33e-24,12;UBERON:0004456,6.33e-24,12;UBERON:0000033,3.77e-22,13;UBERON:0005085,3.77e-22,13;UBERON:0007811,1.91e-08,36;UBERON:0000153,3.65e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0.689706313300419,0.180062129805349,2.41127708537144,1.97305847538851,1.40925092313335,1.21812241927647,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p24@Pax6 | |||
}} |
Latest revision as of 22:26, 1 October 2015
Short description: | p24@Pax6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_Pax6_5end |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | 479bp_to_ENSMUST00000154643_5end |
EntrezGene: | Pax6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.33e-31 | 9 |
camera-type eye | 1.33e-31 | 9 |
simple eye | 1.33e-31 | 9 |
immature eye | 1.33e-31 | 9 |
ocular region | 1.33e-31 | 9 |
visual system | 1.33e-31 | 9 |
face | 1.33e-31 | 9 |
optic cup | 1.33e-31 | 9 |
optic vesicle | 1.33e-31 | 9 |
eye primordium | 1.33e-31 | 9 |
subdivision of head | 5.07e-26 | 11 |
sense organ | 6.33e-24 | 12 |
sensory system | 6.33e-24 | 12 |
entire sense organ system | 6.33e-24 | 12 |
head | 3.77e-22 | 13 |
ectodermal placode | 3.77e-22 | 13 |
craniocervical region | 1.91e-08 | 36 |
anterior region of body | 3.65e-07 | 43 |