FFCP PHASE1:Mm9::chr6:92041489..92041500,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:92041489..92041500,+
|short_description=p4@Nr2c2
|description=CAGE_peak_4_at_Nr2c2_5end
|association_with_transcript=77bp_to_NM_011630,uc009cyp.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22026 | |EntrezGene=22026 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P49117,Q3ZAS1 | |UniProt=P49117,Q3ZAS1 | ||
|association_with_transcript=77bp_to_NM_011630,uc009cyp.2_5end | |||
|cluster_id=chr6:92041489..92041500,+ | |||
|description=CAGE_peak_4_at_Nr2c2_5end | |||
|id=chr6:92041489..92041500,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.95e-10!86;UBERON:0001049!8.41e-09!52;UBERON:0005068!8.41e-09!52;UBERON:0006241!8.41e-09!52;UBERON:0007135!8.41e-09!52;UBERON:0000955!8.87e-09!50;UBERON:0006238!8.87e-09!50;UBERON:0002020!1.20e-08!34;UBERON:0002616!2.69e-08!49;UBERON:0000033!5.53e-08!63;UBERON:0000153!7.08e-08!94;UBERON:0002346!7.86e-08!71;UBERON:0003075!7.86e-08!71;UBERON:0007284!7.86e-08!71;UBERON:0002791!2.46e-07!29;UBERON:0003528!2.46e-07!29;UBERON:0001893!2.46e-07!29;UBERON:0000064!7.51e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.98e-11,54;UBERON:0001049,3.08e-10,52;UBERON:0005068,3.08e-10,52;UBERON:0006241,3.08e-10,52;UBERON:0007135,3.08e-10,52;UBERON:0002020,3.13e-09,34;UBERON:0001017,6.31e-09,73;UBERON:0000955,1.04e-08,47;UBERON:0006238,1.04e-08,47;UBERON:0002346,1.05e-08,64;UBERON:0003075,1.05e-08,64;UBERON:0007284,1.05e-08,64;UBERON:0001016,2.78e-08,75;UBERON:0002616,3.83e-08,46;UBERON:0003528,1.30e-07,29;UBERON:0002791,1.30e-07,29;UBERON:0001893,1.30e-07,29;UBERON:0002021,2.75e-07,10;UBERON:0000411,2.75e-07,10;UBERON:0001950,2.75e-07,10;UBERON:0010371,4.52e-07,73;UBERON:0004121,6.34e-07,95;UBERON:0000924,6.34e-07,95;UBERON:0006601,6.34e-07,95;UBERON:0000956,7.60e-07,21;UBERON:0001869,7.60e-07,21;UBERON:0000203,7.60e-07,21 | |||
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| ||
|short_description=p4@Nr2c2 | |||
}} | }} |
Latest revision as of 22:35, 1 October 2015
Short description: | p4@Nr2c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nr2c2_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_NM_011630, uc009cyp.2_5end |
EntrezGene: | Nr2c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.98e-11 | 54 |
neural tube | 3.08e-10 | 52 |
neural rod | 3.08e-10 | 52 |
future spinal cord | 3.08e-10 | 52 |
neural keel | 3.08e-10 | 52 |
gray matter | 3.13e-09 | 34 |
central nervous system | 6.31e-09 | 73 |
brain | 1.04e-08 | 47 |
future brain | 1.04e-08 | 47 |
neurectoderm | 1.05e-08 | 64 |
neural plate | 1.05e-08 | 64 |
presumptive neural plate | 1.05e-08 | 64 |
nervous system | 2.78e-08 | 75 |
regional part of brain | 3.83e-08 | 46 |
brain grey matter | 1.30e-07 | 29 |
regional part of telencephalon | 1.30e-07 | 29 |
telencephalon | 1.30e-07 | 29 |
occipital lobe | 2.75e-07 | 10 |
visual cortex | 2.75e-07 | 10 |
neocortex | 2.75e-07 | 10 |
ecto-epithelium | 4.52e-07 | 73 |
ectoderm-derived structure | 6.34e-07 | 95 |
ectoderm | 6.34e-07 | 95 |
presumptive ectoderm | 6.34e-07 | 95 |
cerebral cortex | 7.60e-07 | 21 |
cerebral hemisphere | 7.60e-07 | 21 |
pallium | 7.60e-07 | 21 |