FFCP PHASE1:Mm9::chr6:92042363..92042413,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22026 | |EntrezGene=22026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=385 | |||
|TSSclassifier=NA | |||
|UniProt=G3X9W4 | |UniProt=G3X9W4 | ||
|association_with_transcript=-13bp_to_ENSMUST00000113463,uc009cyq.2_5end | |association_with_transcript=-13bp_to_ENSMUST00000113463,uc009cyq.2_5end | ||
|cluster_id=chr6:92042363..92042413,+ | |||
|description=CAGE_peak_3_at_Nr2c2_5end | |description=CAGE_peak_3_at_Nr2c2_5end | ||
|id=chr6:92042363..92042413,+ | |id=chr6:92042363..92042413,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.25e-11!86;UBERON:0000033!1.92e-10!63;UBERON:0000153!2.60e-10!94;UBERON:0000955!6.18e-09!50;UBERON:0006238!6.18e-09!50;UBERON:0002616!6.67e-09!49;UBERON:0002346!3.95e-07!71;UBERON:0003075!3.95e-07!71;UBERON:0007284!3.95e-07!71;UBERON:0001049!4.58e-07!52;UBERON:0005068!4.58e-07!52;UBERON:0006241!4.58e-07!52;UBERON:0007135!4.58e-07!52;UBERON:0003056!5.31e-07!49;UBERON:0000475!7.50e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.30e-08,54;UBERON:0000955,7.69e-08,47;UBERON:0006238,7.69e-08,47;UBERON:0002616,8.42e-08,46;UBERON:0001049,4.32e-07,52;UBERON:0005068,4.32e-07,52;UBERON:0006241,4.32e-07,52;UBERON:0007135,4.32e-07,52;UBERON:0002346,6.35e-07,64;UBERON:0003075,6.35e-07,64;UBERON:0007284,6.35e-07,64;UBERON:0003056,6.36e-07,49 | |||
|phase1_expression=2.40223270657191,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,0.503637815735669,0.467225281191051,0.645616617207881,2.25261955442667,2.34064526321993,1.54096171402954,0.797721589953364,0.684802919724823,1.31130603628496,0.999329285446988,0.809901069559304,0.699561878128147,1.89277299214943,2.33094537129756,3.81950686618227,3.14660173558958,2.38298282882125,0.522399578277871,0.47997726838022,0.45881856213434,0.57423196411502,0,0.430942465371778,0.760093677825496,0.252030129759931,1.77384408524244,2.54012269383853,1.23012957516914,0,1.73310971850765,1.16364251750945,1.22501613757421,12.5559489221072,5.4693474116666,17.7998072951091,9.41170380849623,6.14740936462601,10.6812277666854,0.755380907853464,0.912392380975631,0.183546752161682,4.69434806608824,1.30815093828268,1.5378032791413,1.74986909166855,0.419959264876088,1.43752564364972,2.18117387875057,5.80289713609076,1.34437519656986,0.514518872071894,0.85960031981627,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0,0,1.15265491596466,1.14058573539325,0.810035629990144,0.420649922702764,1.14260393761521,1.10434270475807,1.22490799214954,1.0543001812006,2.75765635983006,3.30347642998166,2.55374676170375,2.91852413186863,1.05509030184155,1.37231465403614,2.08365348222704,2.23346399201105,1.12552522006336,1.68078072554491,1.17851434189467,1.42371680799103,1.4911955666024,0.302904773332736,0.453429360640713,3.18850937571846,1.72084775396277,0.679971333707751,0,1.94932925234301,0.448026887097336,0.421333260395256,0.170430322578058,0.779358013808606,0,3.52108549441701,1.28326477414318,0,7.11066703153331,0.432982082022428,1.01343946190039,0.505524445014783,0.79928715803342,2.84831672011889,1.7813056687779,1.90833859442749,0.608930956624282,2.07553947530453,1.65794904607885,1.17588707135705,2.01066546127481,2.22475470960936,1.3013942122792,0.884610551949874,2.42650274921114,2.20841518460394,0.969750506270444,3.72783522436244,1.75668478206928,3.56059401582874,1.27728527604296,2.51611761462433,5.39912457894067,3.17675567682662,2.99581278809645,2.28750301409313,1.88481528169297,4.69325664519146,5.62574006126727,2.28566849015516,3.40706652442291,2.95334155165917,2.23932547098167,3.28539585963777,1.26265113531884,0.780722657776222,1.37941262660084,1.62055916824814,1.35634336052144,3.94611695077702,2.94661556655154,3.09215691047105,1.81092359517311,0.862271971731369,2.26927296201383,1.58356011747554,1.09597866213787,1.39023624612799,0.696504333044333,0.411564272815887,1.79130840136644,4.91549231119264,3.3455227924913,3.40996199274711,0,0.703578179943289,0,0.23674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.07309360559848,1.05088808130453,1.6455984991348,0.820837320395476,0.810688095458557,0.730999937126662,0.878200461164203,0.939444931322602,3.36463917702604,2.6755199218614,1.32167513193519,0.793351699990633,0.639864751605702,2.09013004674395,0.77320476793256,0.80673409849337,0.889512175379481,0.380451252225118,0.474529061544512,0.988193728344065,2.76468729680296,1.39269530428806,0.779856348476481,0,0.864552199498777,1.99141273254367,1.51734320762465,1.48523066392647,1.1270773567308,1.4255592949172,1.93952487167626,1.82353131714828,1.83385957660346,1.47610147979602,1.41298855057237,1.85095745882701,0.889357881261447,0.83422552858047,0.589676985339609,0.899448449539415,1.42002084971952,1.20588579876208,0.763877555344259,0.287696137450811,0.972811360650212,0.549122826376163,0,1.48856379067401,1.5601883655728,2.27320990152401,1.61457672169721,3.85954817090694,0.739012760666419,1.32643988239339,1.46668478797823,2.37643120085263,2.11221223459652,2.34508760418542,0.714130922658041,2.92700471786698,2.36452716159286,2.43611158613652,2.23236676120482,1.14704320301017,1.72684981865896,1.59113964439663,0,0.54390568381871,0,0.551873492609465,2.24770825982909,2.57865710502847,0.163934945376675,1.26235463602186,1.57754109708128,0.390438744296638,0.646270193198397,0,1.11399337041197,1.13230612315533,1.21443210502468,0,1.18586333383957,1.60660658210904,1.41940085208269,1.6025904330053,2.60619134965722,1.48473110675282,0,0.971122544619926,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.80899805217755,2.90826983582004,1.42598951353889,1.58018378967908,0,1.03135543248187,4.08527526904546,2.16073312837572,2.06973894052407,4.71541477069503,3.72414490648775,3.0322698992352,5.43011767986999,3.95804433848979,0.23467170806371,1.27099242518292,1.54369878638473,0.49465875882444,0.645857706783622,1.74907482291652,1.43246812803764,0.984845398470368,1.1659233465194,1.48340241608408,1.70870880797853,1.857481811669,2.40752885580625,0.753473828018764,0.683471138605126,1.37266903923914,1.18984900995699,2.51912614182584,2.76399947608848,0,1.89801596148681,1.82987520414164,1.29606408986162,2.09088296014469,1.09181281873089,1.48350781023303,1.73572257023205,1.04702376793612,2.07383957266869,1.86401793926078,14.0923234671048,1.7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| |phase1_expression=2.40223270657191,0.697950815278722,0.909998478779072,0.30246421130683,1.00179145989269,0.503637815735669,0.467225281191051,0.645616617207881,2.25261955442667,2.34064526321993,1.54096171402954,0.797721589953364,0.684802919724823,1.31130603628496,0.999329285446988,0.809901069559304,0.699561878128147,1.89277299214943,2.33094537129756,3.81950686618227,3.14660173558958,2.38298282882125,0.522399578277871,0.47997726838022,0.45881856213434,0.57423196411502,0,0.430942465371778,0.760093677825496,0.252030129759931,1.77384408524244,2.54012269383853,1.23012957516914,0,1.73310971850765,1.16364251750945,1.22501613757421,12.5559489221072,5.4693474116666,17.7998072951091,9.41170380849623,6.14740936462601,10.6812277666854,0.755380907853464,0.912392380975631,0.183546752161682,4.69434806608824,1.30815093828268,1.5378032791413,1.74986909166855,0.419959264876088,1.43752564364972,2.18117387875057,5.80289713609076,1.34437519656986,0.514518872071894,0.85960031981627,0.515672092277442,1.21389876515759,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0.988866362566974,0,0,1.15265491596466,1.14058573539325,0.810035629990144,0.420649922702764,1.14260393761521,1.10434270475807,1.22490799214954,1.0543001812006,2.75765635983006,3.30347642998166,2.55374676170375,2.91852413186863,1.05509030184155,1.37231465403614,2.08365348222704,2.23346399201105,1.12552522006336,1.68078072554491,1.17851434189467,1.42371680799103,1.4911955666024,0.302904773332736,0.453429360640713,3.18850937571846,1.72084775396277,0.679971333707751,0,1.94932925234301,0.448026887097336,0.421333260395256,0.170430322578058,0.779358013808606,0,3.52108549441701,1.28326477414318,0,7.11066703153331,0.432982082022428,1.01343946190039,0.505524445014783,0.79928715803342,2.84831672011889,1.7813056687779,1.90833859442749,0.608930956624282,2.07553947530453,1.65794904607885,1.17588707135705,2.01066546127481,2.22475470960936,1.3013942122792,0.884610551949874,2.42650274921114,2.20841518460394,0.969750506270444,3.72783522436244,1.75668478206928,3.56059401582874,1.27728527604296,2.51611761462433,5.39912457894067,3.17675567682662,2.99581278809645,2.28750301409313,1.88481528169297,4.69325664519146,5.62574006126727,2.28566849015516,3.40706652442291,2.95334155165917,2.23932547098167,3.28539585963777,1.26265113531884,0.780722657776222,1.37941262660084,1.62055916824814,1.35634336052144,3.94611695077702,2.94661556655154,3.09215691047105,1.81092359517311,0.862271971731369,2.26927296201383,1.58356011747554,1.09597866213787,1.39023624612799,0.696504333044333,0.411564272815887,1.79130840136644,4.91549231119264,3.3455227924913,3.40996199274711,0,0.703578179943289,0,0.23674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.07309360559848,1.05088808130453,1.6455984991348,0.820837320395476,0.810688095458557,0.730999937126662,0.878200461164203,0.939444931322602,3.36463917702604,2.6755199218614,1.32167513193519,0.793351699990633,0.639864751605702,2.09013004674395,0.77320476793256,0.80673409849337,0.889512175379481,0.380451252225118,0.474529061544512,0.988193728344065,2.76468729680296,1.39269530428806,0.779856348476481,0,0.864552199498777,1.99141273254367,1.51734320762465,1.48523066392647,1.1270773567308,1.4255592949172,1.93952487167626,1.82353131714828,1.83385957660346,1.47610147979602,1.41298855057237,1.85095745882701,0.889357881261447,0.83422552858047,0.589676985339609,0.899448449539415,1.42002084971952,1.20588579876208,0.763877555344259,0.287696137450811,0.972811360650212,0.549122826376163,0,1.48856379067401,1.5601883655728,2.27320990152401,1.61457672169721,3.85954817090694,0.739012760666419,1.32643988239339,1.46668478797823,2.37643120085263,2.11221223459652,2.34508760418542,0.714130922658041,2.92700471786698,2.36452716159286,2.43611158613652,2.23236676120482,1.14704320301017,1.72684981865896,1.59113964439663,0,0.54390568381871,0,0.551873492609465,2.24770825982909,2.57865710502847,0.163934945376675,1.26235463602186,1.57754109708128,0.390438744296638,0.646270193198397,0,1.11399337041197,1.13230612315533,1.21443210502468,0,1.18586333383957,1.60660658210904,1.41940085208269,1.6025904330053,2.60619134965722,1.48473110675282,0,0.971122544619926,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.80899805217755,2.90826983582004,1.42598951353889,1.58018378967908,0,1.03135543248187,4.08527526904546,2.16073312837572,2.06973894052407,4.71541477069503,3.72414490648775,3.0322698992352,5.43011767986999,3.95804433848979,0.23467170806371,1.27099242518292,1.54369878638473,0.49465875882444,0.645857706783622,1.74907482291652,1.43246812803764,0.984845398470368,1.1659233465194,1.48340241608408,1.70870880797853,1.857481811669,2.40752885580625,0.753473828018764,0.683471138605126,1.37266903923914,1.18984900995699,2.51912614182584,2.76399947608848,0,1.89801596148681,1.82987520414164,1.29606408986162,2.09088296014469,1.09181281873089,1.48350781023303,1.73572257023205,1.04702376793612,2.07383957266869,1.86401793926078,14.0923234671048,1.7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| ||
|short_description=p3@Nr2c2 | |short_description=p3@Nr2c2 | ||
}} | }} |
Latest revision as of 22:36, 1 October 2015
Short description: | p3@Nr2c2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nr2c2_5end |
Coexpression cluster: | MCL_coexpression_mm9:385 |
Association with transcript: | -13bp_to_ENSMUST00000113463, uc009cyq.2_5end |
EntrezGene: | Nr2c2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.30e-08 | 54 |
brain | 7.69e-08 | 47 |
future brain | 7.69e-08 | 47 |
regional part of brain | 8.42e-08 | 46 |
neural tube | 4.32e-07 | 52 |
neural rod | 4.32e-07 | 52 |
future spinal cord | 4.32e-07 | 52 |
neural keel | 4.32e-07 | 52 |
neurectoderm | 6.35e-07 | 64 |
neural plate | 6.35e-07 | 64 |
presumptive neural plate | 6.35e-07 | 64 |
pre-chordal neural plate | 6.36e-07 | 49 |