FFCP PHASE1:Mm9::chr16:35939058..35939158,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:35939058..35939158,+
|short_description=p1@Parp9
|description=CAGE_peak_1_at_Parp9_5end
|association_with_transcript=0bp_to_ENSMUST00000023622,ENSMUST0000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=80285 | |EntrezGene=80285 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=345 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CAS9,E0CYZ7 | |UniProt=Q8CAS9,E0CYZ7 | ||
|association_with_transcript=0bp_to_ENSMUST00000023622,ENSMUST00000114877,ENSMUST00000122870,ENSMUST00000128878_5end | |||
|cluster_id=chr16:35939058..35939158,+ | |||
|description=CAGE_peak_1_at_Parp9_5end | |||
|id=chr16:35939058..35939158,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.78e-18!130;UBERON:0000925!1.78e-18!130;UBERON:0006595!1.78e-18!130;UBERON:0001007!5.93e-18!128;UBERON:0001555!5.93e-18!128;UBERON:0007026!5.93e-18!128;UBERON:0004921!7.26e-17!126;UBERON:0004185!7.26e-17!126;UBERON:0002405!7.71e-13!70;UBERON:0000490!9.73e-11!66;UBERON:0003929!2.67e-10!55;UBERON:0005911!4.24e-10!69;UBERON:0005057!5.32e-09!51;UBERON:0004923!6.46e-09!24;UBERON:0005409!4.89e-08!59;UBERON:0000160!6.56e-08!43;UBERON:0000077!7.09e-08!97;UBERON:0002193!1.39e-07!48;UBERON:0003104!2.94e-07!131;UBERON:0009142!2.94e-07!131;UBERON:0000344!3.72e-07!15;UBERON:0001041!4.56e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.63e-19,118;UBERON:0000925,1.63e-19,118;UBERON:0006595,1.63e-19,118;UBERON:0001007,5.37e-19,116;UBERON:0001555,5.37e-19,116;UBERON:0007026,5.37e-19,116;UBERON:0004921,7.08e-18,114;UBERON:0000490,9.06e-11,66;UBERON:0003929,2.47e-10,55;UBERON:0000160,3.55e-10,31;UBERON:0005911,3.97e-10,69;UBERON:0005409,1.69e-09,47;UBERON:0004923,6.43e-09,24;UBERON:0001041,9.57e-08,80;UBERON:0002193,1.30e-07,48;UBERON:0002405,1.30e-07,48;UBERON:0000344,3.71e-07,15;UBERON:0005256,4.68e-07,45 | |||
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| |phase1_expression=2.08193501236232,64.5604504132818,56.874904923692,78.6406949397758,71.6280893823276,18.6345991822198,32.4721570427781,49.1959862312406,7.88416844049334,10.2988391581677,3.76679530096111,1.91453181588807,64.5426751840646,56.7358411699293,36.6420737997229,45.354459895321,44.0723983220732,61.041928996819,51.1436837349406,47.1072513495814,12.5013636522073,27.4043025314443,33.9559725880616,51.3575677166835,55.5170460182551,45.9385571292016,45.2300095967028,46.1108437947803,82.0901172051535,61.2433215316632,44.5678326417162,1.27006134691926,1.84519436275371,15.8481681015439,12.4206196493048,15.1273527276228,14.0876855821035,48.5496691654813,33.5974198145234,45.0230419817467,38.8232782100469,41.6657745824652,39.8118489485546,16.7442767907518,14.192770370732,10.6457116253775,7.04152209913235,4.36050312760893,3.29529274101708,7.38833616482277,12.4587915246573,1.43752564364972,35.9054776963556,39.8949178106239,38.6507869013834,16.2073444702647,16.3324060765091,23.7209162447623,0,0,0,3.04960078862219,8.00365316500025,9.89889689009539,24.7216590641744,5.6838409195688,5.09320187881288,3.45796474789399,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,1.54607978666129,0,0.479227355091182,0,0,2.17068474744819,2.61131106535614,0.395658863190582,0.274462930807229,0.52091337055676,2.51264699101243,3.93933827022176,2.75036845998258,1.47314292736834,2.13557521198654,0.931997229126503,23.5508461266202,31.0599112038888,93.0465008732386,49.9045848649204,11.5595126730318,31.3027851149934,51.3323369783659,43.9066349355389,32.1617722101712,10.0553890321054,12.9893002301434,6.00677276667578,1.97180787687353,3.84979432242953,0,14.2213340630666,7.36069539438128,8.61423542615335,3.53867111510348,34.9402671940324,81.0475575815647,20.9303416081403,2.4287945747259,2.74018930480927,3.68984795609694,14.1679282119465,15.8744754633201,13.4463252722753,43.2591193535154,34.7038456607788,17.6922110389975,7.27950824763341,14.575540218386,19.8798853785441,33.550517019262,4.39171195517321,1.8850203613211,81.2353435563321,9.82484020948546,10.7982491578813,13.2153036155987,2.24685959107234,3.20250421973039,1.13088916901578,2.08589184230732,3.06858548796397,2.49345653471472,1.62241263067758,11.1004906596845,19.5318943857846,12.3834151632501,10.9429765060966,1.04096354370163,1.60931473103431,1.62055916824814,2.10986744970001,4.69451844144162,3.58718416797579,3.37326208415024,8.2785078636485,0.431135985865684,0.567318240503458,1.05570674498369,2.6303487891309,2.50242524303038,4.179025998266,7.20237477427802,0.995171334092466,6.31991868581911,11.5806558201622,12.7873574728017,0.828503090142008,2.11073453982987,2.34080679899319,3.78791576936336,6.88674811115913,4.01094493507183,6.51095045301142,9.12129564758705,13.5447797145917,6.41783414662574,11.984224877774,13.3763535750662,13.4503988431306,25.4678133737619,20.936201326618,3.15434922846191,3.19004298375782,131.176256844568,62.67478429926,1.06644125267617,3.71578674976702,7.34544529535932,10.4875432804138,17.7902435075896,35.1917408308234,55.0453711391634,50.0684822360993,43.2296559136464,52.723465090905,43.6719555146829,81.7925661875342,75.4321794062683,59.9415232495645,1.32767530667157,1.94222471436539,1.1270773567308,4.2766778847516,10.0855293327165,7.29412526859313,8.41045943752622,11.0707610984702,13.0308944108341,11.9695249004147,59.8834306716041,5.33904338291501,7.66580080941492,10.3436571697033,9.53442570525964,13.0235666266305,12.4766667372896,42.2913322052692,33.5619919424323,36.5166679540148,51.7565543498476,46.5176184585629,40.5648975048929,51.2735122232637,45.9257378616095,32.3237159313456,48.9595953941502,1.51593129416388,2.28150967018836,2.37643120085263,5.39787571063555,9.04533790185805,24.9945822930314,20.6841666729267,16.3940549870439,25.6899039992579,13.5536553358864,29.1676700194014,34.709681355045,30.810249477862,120.633027151418,169.154667667619,26.0635064700089,33.6642830491774,5.29816946959713,3.16471553798949,4.09837363441689,11.1087207969924,5.99465616890888,5.46614242015294,10.7711698866399,10.0366895140072,9.35754431146055,8.49229592366497,10.1202675418724,9.35218745316198,7.51046778098395,4.17717711348349,17.8844507362418,6.05423052468668,8.95878276444668,26.5601897985782,7.96470830039777,5.58395463156457,4.83717691143602,8.11001842950362,5.90603785761546,12.912276213645,24.8091161441492,16.7225515559653,12.83390562185,9.7971394960103,6.32511651449993,8.25084345985495,17.3624198934432,1.08036656418786,2.45781499187234,3.42939256050548,3.90148514013002,2.31879462882692,3.45552943264454,9.74287837166718,25.8138878870081,23.3015277950202,14.1138174755176,7.74965388824956,14.5317984026315,7.11692514152239,6.2073618881631,4.92422699235184,56.2558014695612,4.45020724825223,38.6168190603147,5.57244543500701,44.6318810961005,30.5156900347599,34.5836396134194,40.9512930039675,20.0574547392749,24.7714070612875,23.2175955991432,17.184071124272,1.10717597753397,4.87966721104437,5.07625101862466,5.43629569637619,13.538478952263,10.6542833644008,17.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| ||
|short_description=p1@Parp9 | |||
}} | }} |
Latest revision as of 23:01, 1 October 2015
Short description: | p1@Parp9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Parp9_5end |
Coexpression cluster: | MCL_coexpression_mm9:345 |
Association with transcript: | 0bp_to_ENSMUST00000023622, ENSMUST00000114877, ENSMUST00000122870, ENSMUST00000128878_5end |
EntrezGene: | Parp9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.63e-19 | 118 |
endoderm | 1.63e-19 | 118 |
presumptive endoderm | 1.63e-19 | 118 |
digestive system | 5.37e-19 | 116 |
digestive tract | 5.37e-19 | 116 |
primitive gut | 5.37e-19 | 116 |
subdivision of digestive tract | 7.08e-18 | 114 |
unilaminar epithelium | 9.06e-11 | 66 |
gut epithelium | 2.47e-10 | 55 |
intestine | 3.55e-10 | 31 |
endo-epithelium | 3.97e-10 | 69 |
gastrointestinal system | 1.69e-09 | 47 |
organ component layer | 6.43e-09 | 24 |
foregut | 9.57e-08 | 80 |
hemolymphoid system | 1.30e-07 | 48 |
immune system | 1.30e-07 | 48 |
mucosa | 3.71e-07 | 15 |
trunk mesenchyme | 4.68e-07 | 45 |