FFCP PHASE1:Mm9::chr19:20567240..20567275,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320092 | |EntrezGene=320092 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2251 | |MCL_coexpression_id=2251 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_NR_015502,uc008gyk.1,uc008gyl.1,uc012bji.1_5end | |association_with_transcript=35bp_to_NR_015502,uc008gyk.1,uc008gyl.1,uc012bji.1_5end | ||
|cluster_id=chr19:20567240..20567275,+ | |||
|description=CAGE_peak_2_at_E030003E18Rik_5end | |description=CAGE_peak_2_at_E030003E18Rik_5end | ||
|id=chr19:20567240..20567275,+ | |id=chr19:20567240..20567275,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.27e-10!122;UBERON:0007023!2.05e-09!51;UBERON:0000025!2.33e-08!114;UBERON:0000033!3.64e-07!63 | |ontology_enrichment_uberon=UBERON:0004111!1.27e-10!122;UBERON:0007023!2.05e-09!51;UBERON:0000025!2.33e-08!114;UBERON:0000033!3.64e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.02e-12,51;UBERON:0004111,2.20e-11,122;UBERON:0000025,1.03e-08,114;UBERON:0010314,5.77e-08,92;UBERON:0000073,1.08e-07,54;UBERON:0000955,2.40e-07,47;UBERON:0006238,2.40e-07,47;UBERON:0010371,3.90e-07,73;UBERON:0004121,4.01e-07,95;UBERON:0000924,4.01e-07,95;UBERON:0006601,4.01e-07,95;UBERON:0002616,5.94e-07,46;UBERON:0002021,7.13e-07,10;UBERON:0000411,7.13e-07,10;UBERON:0001950,7.13e-07,10;UBERON:0001049,7.58e-07,52;UBERON:0005068,7.58e-07,52;UBERON:0006241,7.58e-07,52;UBERON:0007135,7.58e-07,52 | |||
|phase1_expression=1.44133962394315,1.39590163055744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1076181570693,16.7271936512199,6.24058957349717,3.12956537739216,0.872100625521786,10.9843091367236,6.9994763666742,1.67983705950435,0,0,0,0,36.5308399171045,67.9084252654853,93.3366487022171,0,0,0,0.338844532069132,0,0,0,0,1.49800055259202,0,0,0,0,1.42825492201902,1.32521124570968,0,0,0,17.6185409599022,15.0671058940522,4.45458946443106,0,0.0914876436024097,0,32.6644108831616,5.06486349028512,15.5854212732346,0.883885756421003,0.142371680799103,0,0,0.151143120213571,1.15945795480671,1.72084775396277,0,0,0.649776417447669,0.448026887097336,6.88177658645584,0,0.519572009205738,0,1.83096445709685,0,0,0,0,0,0,3.53970027129086,2.07150306917737,3.85949561568544,0.173485326766136,1.82679286987285,0.922461989024234,0.753613202763113,1.41106448562846,0.753999547978053,13.8429181931249,4.916378135277,0.884610551949874,0.970601099684455,1.32504911076236,2.42437626567611,0,43.9171195517321,42.7271281899448,0,0,0,0,31.9054061932272,14.1825186873774,0,8.8650403298061,13.8086346958378,29.5059023274575,24.6606719862992,3.97173519016234,4.60305791257344,3.53811861807145,3.78795340595653,0,0,0,1.05493372485001,4.49040894398764,1.40925092313335,0.749613796477831,5.17406741478031,0,0,0,0,0.278047249225598,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,1.63471479314037,1.81015834904829,1.47750717671186,3.08061476274252,5.11699955988663,2.63460138349261,6.1734952629771,12.4071069652835,0.411618449517138,0,0.264450566663544,0.426576501070468,0.232236671860439,1.15980715189884,1.21010114774006,0.889512175379481,0.190225626112559,0.474529061544512,0.988193728344065,0,0,0.779856348476481,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0,0.295220295959204,0.156998727841375,0.493588655687202,2.66807364378434,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,1.45921704097532,0,0,1.11642284300551,0.624075346229121,1.01031551178845,0.896987067609561,2.8946611281802,10.5309318394965,0,0,0,0.234690248288502,0.837531287209079,3.09456733151818,4.68320754858717,0.630540576424764,0.44292937929755,0.637819074629948,10.8149787712387,7.08008425650172,23.7224456073679,0,0,3.44234991113325,7.45029215022778,55.7110547257638,52.7452589664914,0,14.6433137778536,0,0,0,0,0,0,0,0,0,4.81981974632711,4.25820255624806,0.712262414669021,1.14020871547503,2.3095817216155,3.98235415019888,0,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,2.84271122485043,0.727067458955011,0.712994756769443,2.52829406348653,0,3.09406629744561,5.44703369206061,0,0,0,0,0,0.987294123612726,0.304464949114599,0,1.0591603543191,3.96951116498931,11.3771514529621,3.06782410722221,0.965006798850494,0.835606408021955,0.328281799490123,0.874442509889552,37.826761610144,0.512612642393558,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,3.81868247206045,0,0.609958401380546,0.86404272657441,1.25452977608681,2.40198820120795,2.56242258131159,1.65306911450672,4.18809507174447,2.59229946583586,8.07741107013003,11.2738587736838,0.149516546043979,0.330916980914195,0.777804753376191,1.16243841129958,2.02747350588934,2.22978753426933,7.16124116641726,15.5191829750052,18.8435614244285,18.7219504067613,0.948033361884535,0.202725215290164,0,0.25984164595559,0,0.596044064343795,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.116876902181569,10.6563280299149,0,0,0,5.40930863290133,3.56596703357246,5.12824547948342,1.2862102744744,4.01257683228291,9.60078132449013,11.0478056761722,6.30185064783336,12.5452823110892,7.53590771747707,9.06472676867641,6.07520250208625,3.15224842256954,3.17199686288943,3.62432218226274,0,0,0,0,0,0.367687016900028,1.77797382241292,0.824140228955577,1.60459604795908,1.01078884705519,1.01391719956096,1.32038438970253,1.31098110457835,1.34452820050225,0.689225627467359,0.952587382566147,0.811190281613988,0.578727661391115,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,1.90748951957857,1.0174249164263,0.564656282491984,0.846146078916765,0.365855945745545,1.31534855718921,0.950628796921032,0.561142271657738,0.830445126869219,0.492522411877817,0.818462086339379,1.23949472948773,1.35034627686799,0.249810577937946,1.40358965067245,1.50409737833809,3.44318997723918,2.20591419119516,2.78241402744506 | |phase1_expression=1.44133962394315,1.39590163055744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95006494767516,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1076181570693,16.7271936512199,6.24058957349717,3.12956537739216,0.872100625521786,10.9843091367236,6.9994763666742,1.67983705950435,0,0,0,0,36.5308399171045,67.9084252654853,93.3366487022171,0,0,0,0.338844532069132,0,0,0,0,1.49800055259202,0,0,0,0,1.42825492201902,1.32521124570968,0,0,0,17.6185409599022,15.0671058940522,4.45458946443106,0,0.0914876436024097,0,32.6644108831616,5.06486349028512,15.5854212732346,0.883885756421003,0.142371680799103,0,0,0.151143120213571,1.15945795480671,1.72084775396277,0,0,0.649776417447669,0.448026887097336,6.88177658645584,0,0.519572009205738,0,1.83096445709685,0,0,0,0,0,0,3.53970027129086,2.07150306917737,3.85949561568544,0.173485326766136,1.82679286987285,0.922461989024234,0.753613202763113,1.41106448562846,0.753999547978053,13.8429181931249,4.916378135277,0.884610551949874,0.970601099684455,1.32504911076236,2.42437626567611,0,43.9171195517321,42.7271281899448,0,0,0,0,31.9054061932272,14.1825186873774,0,8.8650403298061,13.8086346958378,29.5059023274575,24.6606719862992,3.97173519016234,4.60305791257344,3.53811861807145,3.78795340595653,0,0,0,1.05493372485001,4.49040894398764,1.40925092313335,0.749613796477831,5.17406741478031,0,0,0,0,0.278047249225598,1.0447564995665,0.823128545631774,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0.268273401399619,1.63471479314037,1.81015834904829,1.47750717671186,3.08061476274252,5.11699955988663,2.63460138349261,6.1734952629771,12.4071069652835,0.411618449517138,0,0.264450566663544,0.426576501070468,0.232236671860439,1.15980715189884,1.21010114774006,0.889512175379481,0.190225626112559,0.474529061544512,0.988193728344065,0,0,0.779856348476481,0.898819408654221,0.648414149624083,0.995706366271836,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0,0.295220295959204,0.156998727841375,0.493588655687202,2.66807364378434,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,1.45921704097532,0,0,1.11642284300551,0.624075346229121,1.01031551178845,0.896987067609561,2.8946611281802,10.5309318394965,0,0,0,0.234690248288502,0.837531287209079,3.09456733151818,4.68320754858717,0.630540576424764,0.44292937929755,0.637819074629948,10.8149787712387,7.08008425650172,23.7224456073679,0,0,3.44234991113325,7.45029215022778,55.7110547257638,52.7452589664914,0,14.6433137778536,0,0,0,0,0,0,0,0,0,4.81981974632711,4.25820255624806,0.712262414669021,1.14020871547503,2.3095817216155,3.98235415019888,0,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,2.84271122485043,0.727067458955011,0.712994756769443,2.52829406348653,0,3.09406629744561,5.44703369206061,0,0,0,0,0,0.987294123612726,0.304464949114599,0,1.0591603543191,3.96951116498931,11.3771514529621,3.06782410722221,0.965006798850494,0.835606408021955,0.328281799490123,0.874442509889552,37.826761610144,0.512612642393558,0.412773735926445,0.370389054739423,0,0.27338845544205,0,0,0,0,3.81868247206045,0,0.609958401380546,0.86404272657441,1.25452977608681,2.40198820120795,2.56242258131159,1.65306911450672,4.18809507174447,2.59229946583586,8.07741107013003,11.2738587736838,0.149516546043979,0.330916980914195,0.777804753376191,1.16243841129958,2.02747350588934,2.22978753426933,7.16124116641726,15.5191829750052,18.8435614244285,18.7219504067613,0.948033361884535,0.202725215290164,0,0.25984164595559,0,0.596044064343795,0,0,0,0.15241361331,0.100826185136841,0.194915761479505,0,0.116876902181569,10.6563280299149,0,0,0,5.40930863290133,3.56596703357246,5.12824547948342,1.2862102744744,4.01257683228291,9.60078132449013,11.0478056761722,6.30185064783336,12.5452823110892,7.53590771747707,9.06472676867641,6.07520250208625,3.15224842256954,3.17199686288943,3.62432218226274,0,0,0,0,0,0.367687016900028,1.77797382241292,0.824140228955577,1.60459604795908,1.01078884705519,1.01391719956096,1.32038438970253,1.31098110457835,1.34452820050225,0.689225627467359,0.952587382566147,0.811190281613988,0.578727661391115,0.824171801606613,0.441596760403192,0.685738504770831,0.887379030796687,1.90748951957857,1.0174249164263,0.564656282491984,0.846146078916765,0.365855945745545,1.31534855718921,0.950628796921032,0.561142271657738,0.830445126869219,0.492522411877817,0.818462086339379,1.23949472948773,1.35034627686799,0.249810577937946,1.40358965067245,1.50409737833809,3.44318997723918,2.20591419119516,2.78241402744506 | ||
|short_description=p2@E030003E18Rik | |short_description=p2@E030003E18Rik | ||
}} | }} |
Latest revision as of 23:27, 1 October 2015
Short description: | p2@E030003E18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_E030003E18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2251 |
Association with transcript: | 35bp_to_NR_015502, uc008gyk.1, uc008gyl.1, uc012bji.1_5end |
EntrezGene: | E030003E18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.02e-12 | 51 |
anatomical conduit | 2.20e-11 | 122 |
tube | 1.03e-08 | 114 |
structure with developmental contribution from neural crest | 5.77e-08 | 92 |
regional part of nervous system | 1.08e-07 | 54 |
brain | 2.40e-07 | 47 |
future brain | 2.40e-07 | 47 |
ecto-epithelium | 3.90e-07 | 73 |
ectoderm-derived structure | 4.01e-07 | 95 |
ectoderm | 4.01e-07 | 95 |
presumptive ectoderm | 4.01e-07 | 95 |
regional part of brain | 5.94e-07 | 46 |
occipital lobe | 7.13e-07 | 10 |
visual cortex | 7.13e-07 | 10 |
neocortex | 7.13e-07 | 10 |
neural tube | 7.58e-07 | 52 |
neural rod | 7.58e-07 | 52 |
future spinal cord | 7.58e-07 | 52 |
neural keel | 7.58e-07 | 52 |