FFCP PHASE1:Mm9::chr2:113281225..113281236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14260 | |EntrezGene=14260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q05860 | |UniProt=Q05860 | ||
|association_with_transcript=4bp_to_ENSMUST00000081349,uc008lpn.1_5end | |association_with_transcript=4bp_to_ENSMUST00000081349,uc008lpn.1_5end | ||
|cluster_id=chr2:113281225..113281236,+ | |||
|description=CAGE_peak_10_at_Fmn1_5end | |description=CAGE_peak_10_at_Fmn1_5end | ||
|id=chr2:113281225..113281236,+ | |id=chr2:113281225..113281236,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.89e-12!9;CL:0002251!9.89e-12!9;CL:0000075!6.66e-10!7;CL:0000239!4.95e-09!6;CL:0000677!4.95e-09!6;CL:0000212!4.95e-09!6;CL:0000584!4.95e-09!6;CL:0000066!1.03e-08!25;CL:0002076!2.26e-07!15 | |ontology_enrichment_celltype=CL:0002563!9.89e-12!9;CL:0002251!9.89e-12!9;CL:0000075!6.66e-10!7;CL:0000239!4.95e-09!6;CL:0000677!4.95e-09!6;CL:0000212!4.95e-09!6;CL:0000584!4.95e-09!6;CL:0000066!1.03e-08!25;CL:0002076!2.26e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.58e-19,9;CL:0002251,1.58e-19,9;CL:0000239,6.85e-18,6;CL:0000677,6.85e-18,6;CL:0000584,6.85e-18,6;CL:0000075,3.12e-15,7;CL:0000066,8.29e-12,25;CL:0002076,3.55e-11,15;CL:0000682,4.34e-09,3;CL:0000223,4.79e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.39e-25!59;UBERON:0000160!1.30e-20!43;UBERON:0000344!1.67e-18!15;UBERON:0001242!2.25e-16!13;UBERON:0000060!2.25e-16!13;UBERON:0001262!2.25e-16!13;UBERON:0004786!2.25e-16!13;UBERON:0003350!9.89e-12!9;UBERON:0004808!9.89e-12!9;UBERON:0001277!9.89e-12!9;UBERON:0000485!3.39e-11!11;UBERON:0001007!1.10e-10!128;UBERON:0001555!1.10e-10!128;UBERON:0007026!1.10e-10!128;UBERON:0004119!2.65e-10!130;UBERON:0000925!2.65e-10!130;UBERON:0006595!2.65e-10!130;UBERON:0004923!1.13e-09!24;UBERON:0004921!1.68e-09!126;UBERON:0004185!1.68e-09!126 | |ontology_enrichment_uberon=UBERON:0005409!5.39e-25!59;UBERON:0000160!1.30e-20!43;UBERON:0000344!1.67e-18!15;UBERON:0001242!2.25e-16!13;UBERON:0000060!2.25e-16!13;UBERON:0001262!2.25e-16!13;UBERON:0004786!2.25e-16!13;UBERON:0003350!9.89e-12!9;UBERON:0004808!9.89e-12!9;UBERON:0001277!9.89e-12!9;UBERON:0000485!3.39e-11!11;UBERON:0001007!1.10e-10!128;UBERON:0001555!1.10e-10!128;UBERON:0007026!1.10e-10!128;UBERON:0004119!2.65e-10!130;UBERON:0000925!2.65e-10!130;UBERON:0006595!2.65e-10!130;UBERON:0004923!1.13e-09!24;UBERON:0004921!1.68e-09!126;UBERON:0004185!1.68e-09!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.91e-44,31;UBERON:0005409,3.67e-35,47;UBERON:0000344,2.71e-34,15;UBERON:0001242,1.29e-29,13;UBERON:0001262,1.29e-29,13;UBERON:0004786,1.29e-29,13;UBERON:0004923,2.82e-20,24;UBERON:0003350,1.58e-19,9;UBERON:0004808,1.58e-19,9;UBERON:0001277,1.58e-19,9;UBERON:0001007,7.04e-16,116;UBERON:0001555,7.04e-16,116;UBERON:0007026,7.04e-16,116;UBERON:0000485,9.87e-16,11;UBERON:0004119,1.65e-15,118;UBERON:0000925,1.65e-15,118;UBERON:0006595,1.65e-15,118;UBERON:0004921,1.22e-13,114;UBERON:0002108,3.18e-11,4;UBERON:0000331,8.63e-09,3;UBERON:0002116,8.63e-09,3;UBERON:0001204,8.63e-09,3;UBERON:0001168,8.63e-09,3 | |||
|phase1_expression=0,4.53668029931169,4.54999239389536,7.25914107136392,7.51343594919521,2.18243053485457,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,1.75991665072747,1.83527424853736,1.72269589234506,2.58457197695445,4.52489588640367,2.09025761402011,3.52842181663903,1.55211357458713,0,0,0,1.44425809875637,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.951128130562796,3.79623249235609,1.97638745668813,1.50801125280162,0.795825888164603,1.16978452271472,2.69645822596266,3.6743468478698,3.78368419183298,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,1.40510874733071,2.09404753587224,1.16653475962614,2.4853572523477,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.187682475451182,0.36630324853453,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,4.53668029931169,4.54999239389536,7.25914107136392,7.51343594919521,2.18243053485457,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,1.75991665072747,1.83527424853736,1.72269589234506,2.58457197695445,4.52489588640367,2.09025761402011,3.52842181663903,1.55211357458713,0,0,0,1.44425809875637,0.498703936075477,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,0,0.506719730950197,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,2.3800550999719,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.951128130562796,3.79623249235609,1.97638745668813,1.50801125280162,0.795825888164603,1.16978452271472,2.69645822596266,3.6743468478698,3.78368419183298,0,0.114248512609729,0,0.203651327845314,0.581857461502877,0.0701358198903186,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509235257325564,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.627264888043406,0.436725127492355,0.404593039154462,1.40510874733071,2.09404753587224,1.16653475962614,2.4853572523477,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.187682475451182,0.36630324853453,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p10@Fmn1 | |short_description=p10@Fmn1 | ||
}} | }} |
Latest revision as of 23:30, 1 October 2015
Short description: | p10@Fmn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Fmn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 4bp_to_ENSMUST00000081349, uc008lpn.1_5end |
EntrezGene: | Fmn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.58e-19 | 9 |
epithelial cell of alimentary canal | 1.58e-19 | 9 |
brush border epithelial cell | 6.85e-18 | 6 |
gut absorptive cell | 6.85e-18 | 6 |
enterocyte | 6.85e-18 | 6 |
columnar/cuboidal epithelial cell | 3.12e-15 | 7 |
epithelial cell | 8.29e-12 | 25 |
endo-epithelial cell | 3.55e-11 | 15 |
M cell of gut | 4.34e-09 | 3 |
endodermal cell | 4.79e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.91e-44 | 31 |
gastrointestinal system | 3.67e-35 | 47 |
mucosa | 2.71e-34 | 15 |
intestinal mucosa | 1.29e-29 | 13 |
wall of intestine | 1.29e-29 | 13 |
gastrointestinal system mucosa | 1.29e-29 | 13 |
organ component layer | 2.82e-20 | 24 |
epithelium of mucosa | 1.58e-19 | 9 |
gastrointestinal system epithelium | 1.58e-19 | 9 |
intestinal epithelium | 1.58e-19 | 9 |
digestive system | 7.04e-16 | 116 |
digestive tract | 7.04e-16 | 116 |
primitive gut | 7.04e-16 | 116 |
simple columnar epithelium | 9.87e-16 | 11 |
endoderm-derived structure | 1.65e-15 | 118 |
endoderm | 1.65e-15 | 118 |
presumptive endoderm | 1.65e-15 | 118 |
subdivision of digestive tract | 1.22e-13 | 114 |
small intestine | 3.18e-11 | 4 |
ileal mucosa | 8.63e-09 | 3 |
ileum | 8.63e-09 | 3 |
mucosa of small intestine | 8.63e-09 | 3 |
wall of small intestine | 8.63e-09 | 3 |