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FFCP PHASE1:Mm9::chr11:60230524..60230558,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:60230524..60230558,-
|short_description=p1@Atpaf2
|description=CAGE_peak_1_at_Atpaf2_5end
|association_with_transcript=0bp_to_ENSMUST00000108721,ENSMUST00000138696,ENSMUST00000154387,ENSMUST00000156966_5end
|EntrezGene=246782
|EntrezGene=246782
|HGNC=
|HGNC=
|UniProt=Q91YY4
|UniProt=Q91YY4
|association_with_transcript=0bp_to_ENSMUST00000108721,ENSMUST00000138696,ENSMUST00000154387,ENSMUST00000156966_5end
|description=CAGE_peak_1_at_Atpaf2_5end
|id=chr11:60230524..60230558,-
|ontology_enrichment_disease=
|phase1_expression=25.7839643838718,20.9385244583617,19.5649672937501,19.9626379462508,14.5259761684441,24.6782529710478,18.6890112476421,27.2450212461726,17.317012824655,16.3845168425395,30.9904522488164,38.3704084767568,26.0225109495433,28.3242103837552,26.648780945253,25.1069331563384,26.5833513688696,19.5586542522107,21.9383093769182,28.434106670468,32.911753288464,33.4610505546983,34.7395719554784,26.0787649153253,20.4174260149781,24.1177424928308,20.6765758156356,25.6410766896208,28.1234660795433,24.9509828462331,28.381505363879,38.7368710810375,37.5189520426588,63.3926724061755,39.2838202861733,36.2391526881513,38.3838389773254,17.996860121687,16.4080422349998,18.8468547830567,9.99993529652724,16.3930916390027,12.62326917881,23.2909113254818,22.6070556619517,18.3546752161682,20.342174953049,25.2909181401318,20.2111288115714,21.1928589990969,18.6181940761732,24.4379359420452,24.3284778783718,20.3101399763176,27.2235977305396,13.8920095459411,16.0458726365704,8.76642556871652,20.2316460859598,17.4567023159771,17.747279298173,16.9422266034566,21.3430751066673,30.5965903875676,36.5880554149781,26.2877642530057,27.8628102782116,37.2691756161908,19.2862678893768,21.0609263797437,20.8221711737868,25.1372866275347,21.2033799313549,21.9258530594768,22.715376631322,20.2228133054205,26.4278114398533,21.7068474744819,16.4358990584181,17.672762555846,16.9252140664458,16.6692278578163,24.2889209131201,19.1339287410771,18.3357897332172,17.3830865429464,15.9456282494995,18.4535451367048,18.0228340132978,19.3463193873371,12.1743085254705,35.2773789562368,21.0791113449403,43.1762553310254,53.2816662307089,42.1145273871495,39.1839932167588,16.0204503223374,13.768658243952,16.2536204274756,22.2532603247155,16.6824420638613,17.8363667794652,7.11066703153331,25.5459428393233,21.0288688344332,23.7596489156948,31.8573024416177,28.7421050848361,38.4465140177896,30.5334175108399,30.142082352902,23.0615497256059,31.8024771566034,28.4564671268406,59.4402976989365,21.7531571606249,136.646392289317,42.461306493594,26.6915302413225,29.3719219552323,23.7588874036259,48.4618579167118,20.4946557908083,21.7824575085993,30.1439325146138,31.7510079940689,29.395233818677,35.9608742616773,32.8041500296562,24.2475319493872,23.2460551408799,26.421296669226,29.9187085076487,26.1812936145046,27.7432559845866,23.1175355940218,26.4986847399498,31.3376220457757,47.3494175744566,22.9011979614359,17.9323641458109,17.8261508507296,21.701493768343,19.3223657589771,22.5480147701336,22.113606996096,34.1488449375501,27.8082710883366,28.5550181053407,27.2724242454121,23.6731391021781,30.0291029163646,24.3776516565517,29.221063369928,22.0928036168527,40.0261516768544,32.4258362964541,31.5421484329108,45.3605441852749,34.0062786972589,38.3532190911962,33.1442629819294,40.7301959717126,42.1149218182543,50.6923999555889,47.4843920477326,45.0714221537274,45.912198125861,51.0560813285986,48.31701048933,47.2225959383823,56.204829514509,55.6956637855543,22.7113144449257,22.6390147234426,26.10308385572,36.7586287662327,28.7939138222566,27.1716906076713,33.8921423277105,31.6643133658648,32.2448163575062,34.6210639524858,27.0481565080372,21.5755630688454,31.1655658912334,32.2309484706664,27.4899362837959,25.1669434423182,28.962498683209,31.0660386276813,37.3645764877571,27.9908855893836,37.1935527721165,31.3623044881784,27.9291581521381,28.8258219749209,31.7447416363772,34.6883847752065,43.9596437955849,45.0399648314572,46.8395150797695,37.7069938918373,45.0120098809235,39.8005938921191,43.2092058557511,38.1059912408819,34.6291158422731,31.3588789821384,34.3726680763075,42.5570190441526,33.0666875012915,41.6797861388724,53.3584421025899,54.0518798806819,49.6930835455697,54.9985614354239,21.6161232494927,28.6132031773432,27.0521860893763,26.6499784667045,28.3975200429088,27.4710262204578,22.8521895250573,18.1474292507753,20.4925687338048,25.4684393096091,18.1778436269535,25.7265404103709,24.5212674249572,23.4331474902049,22.6186925908908,25.0196614556606,35.4070276573706,38.6311444826625,32.1101179975584,27.3103229759833,22.6230224619812,53.7763074945314,18.2994767261429,15.2271110275689,19.3881057959519,20.790285421872,16.932699230262,18.9661275628518,19.4309136803949,17.82760733259,20.1596766752727,22.8138134659483,26.968616189571,22.4362660620742,22.3155134314399,27.0551001674958,23.8941249011933,23.7925023431882,30.5346792534399,29.0451822824083,30.7113968596004,22.4427657999067,20.4158351602895,26.9014959813354,28.8762876491624,32.2357493094532,27.4088382294997,28.8779521094923,31.3204437293485,23.7680644121329,28.8469864835543,20.1476812929697,22.8768901398533,23.7230527410754,23.6950589667054,24.3571959291679,17.6003781047783,24.9961843619308,30.6534473296397,28.0306630000516,30.3553122188302,31.4230338875692,26.8587774007057,30.6943482523265,25.358832786797,27.8137953015765,29.048049735635,27.2430665711454,27.593984578087,30.5156900347599,25.2884321283897,32.2577224221197,25.836721359066,26.4508244891714,23.493995546752,44.8695190467103,27.8375674351399,29.6846422005199,32.077586224075,29.6905380340546,33.4094722531652,25.0847684275767,30.0858578840223,35.337052167844,36.6810374415774,35.4163408459548,120.066595939733,22.1284488145089,25.480607530393,23.5285937896298,21.3113708738256,25.1744626981259,23.1193760132135,22.9159717325352,24.7468052844678,42.2772211445511,71.1434115456928,37.289312234125,34.0578361687476,32.5593734212502,31.700680806582,33.6570187854865,33.1797862484712,29.5680805819123,32.0486273968833,34.9343916820591,35.3599582879199,31.1552912072837,28.750074818227,28.5749169671778,30.2711176650264,39.2243563654316,28.6361879852543,38.846099911903,30.05134632917,21.0576657495088,24.774086759556,21.2455884150028,27.8678892802786,21.0660283694853,20.8958181768315,21.1749608793301,18.9055519435001,16.497905504994,25.3480532315138,27.1941803060292,19.5756525067224,24.7676661773321,22.203978040226,22.2636934053283,26.7771356767176,34.7151639858897,25.6100408631201,29.4159127652636,30.6035217436854,44.6739725533534,48.4497866607521,51.9208344242013,58.4072961457104,60.9000280350752,53.9910908766211,56.5879024158229,48.8808668992786,54.1012537821145,49.164761426005,55.2500681888365,46.3537303779422,44.9478483680433,57.2799402116596,39.8909073564217,52.801864867354,48.0959434691805,48.1641103693588,51.8886707377413,52.6071436521698,51.1072231665726,47.7442009197936,55.7707788248227,48.4820686429727,48.8193776342232,45.4372119415587,41.5688915624878,48.698494137193,54.692704938646,38.7742288072094,29.7274587746156,45.6166636468546,36.3132081341624,48.2046596813485,51.6183920739666,61.2131086037913
|phase1_expression=25.7839643838718,20.9385244583617,19.5649672937501,19.9626379462508,14.5259761684441,24.6782529710478,18.6890112476421,27.2450212461726,17.317012824655,16.3845168425395,30.9904522488164,38.3704084767568,26.0225109495433,28.3242103837552,26.648780945253,25.1069331563384,26.5833513688696,19.5586542522107,21.9383093769182,28.434106670468,32.911753288464,33.4610505546983,34.7395719554784,26.0787649153253,20.4174260149781,24.1177424928308,20.6765758156356,25.6410766896208,28.1234660795433,24.9509828462331,28.381505363879,38.7368710810375,37.5189520426588,63.3926724061755,39.2838202861733,36.2391526881513,38.3838389773254,17.996860121687,16.4080422349998,18.8468547830567,9.99993529652724,16.3930916390027,12.62326917881,23.2909113254818,22.6070556619517,18.3546752161682,20.342174953049,25.2909181401318,20.2111288115714,21.1928589990969,18.6181940761732,24.4379359420452,24.3284778783718,20.3101399763176,27.2235977305396,13.8920095459411,16.0458726365704,8.76642556871652,20.2316460859598,17.4567023159771,17.747279298173,16.9422266034566,21.3430751066673,30.5965903875676,36.5880554149781,26.2877642530057,27.8628102782116,37.2691756161908,19.2862678893768,21.0609263797437,20.8221711737868,25.1372866275347,21.2033799313549,21.9258530594768,22.715376631322,20.2228133054205,26.4278114398533,21.7068474744819,16.4358990584181,17.672762555846,16.9252140664458,16.6692278578163,24.2889209131201,19.1339287410771,18.3357897332172,17.3830865429464,15.9456282494995,18.4535451367048,18.0228340132978,19.3463193873371,12.1743085254705,35.2773789562368,21.0791113449403,43.1762553310254,53.2816662307089,42.1145273871495,39.1839932167588,16.0204503223374,13.768658243952,16.2536204274756,22.2532603247155,16.6824420638613,17.8363667794652,7.11066703153331,25.5459428393233,21.0288688344332,23.7596489156948,31.8573024416177,28.7421050848361,38.4465140177896,30.5334175108399,30.142082352902,23.0615497256059,31.8024771566034,28.4564671268406,59.4402976989365,21.7531571606249,136.646392289317,42.461306493594,26.6915302413225,29.3719219552323,23.7588874036259,48.4618579167118,20.4946557908083,21.7824575085993,30.1439325146138,31.7510079940689,29.395233818677,35.9608742616773,32.8041500296562,24.2475319493872,23.2460551408799,26.421296669226,29.9187085076487,26.1812936145046,27.7432559845866,23.1175355940218,26.4986847399498,31.3376220457757,47.3494175744566,22.9011979614359,17.9323641458109,17.8261508507296,21.701493768343,19.3223657589771,22.5480147701336,22.113606996096,34.1488449375501,27.8082710883366,28.5550181053407,27.2724242454121,23.6731391021781,30.0291029163646,24.3776516565517,29.221063369928,22.0928036168527,40.0261516768544,32.4258362964541,31.5421484329108,45.3605441852749,34.0062786972589,38.3532190911962,33.1442629819294,40.7301959717126,42.1149218182543,50.6923999555889,47.4843920477326,45.0714221537274,45.912198125861,51.0560813285986,48.31701048933,47.2225959383823,56.204829514509,55.6956637855543,22.7113144449257,22.6390147234426,26.10308385572,36.7586287662327,28.7939138222566,27.1716906076713,33.8921423277105,31.6643133658648,32.2448163575062,34.6210639524858,27.0481565080372,21.5755630688454,31.1655658912334,32.2309484706664,27.4899362837959,25.1669434423182,28.962498683209,31.0660386276813,37.3645764877571,27.9908855893836,37.1935527721165,31.3623044881784,27.9291581521381,28.8258219749209,31.7447416363772,34.6883847752065,43.9596437955849,45.0399648314572,46.8395150797695,37.7069938918373,45.0120098809235,39.8005938921191,43.2092058557511,38.1059912408819,34.6291158422731,31.3588789821384,34.3726680763075,42.5570190441526,33.0666875012915,41.6797861388724,53.3584421025899,54.0518798806819,49.6930835455697,54.9985614354239,21.6161232494927,28.6132031773432,27.0521860893763,26.6499784667045,28.3975200429088,27.4710262204578,22.8521895250573,18.1474292507753,20.4925687338048,25.4684393096091,18.1778436269535,25.7265404103709,24.5212674249572,23.4331474902049,22.6186925908908,25.0196614556606,35.4070276573706,38.6311444826625,32.1101179975584,27.3103229759833,22.6230224619812,53.7763074945314,18.2994767261429,15.2271110275689,19.3881057959519,20.790285421872,16.932699230262,18.9661275628518,19.4309136803949,17.82760733259,20.1596766752727,22.8138134659483,26.968616189571,22.4362660620742,22.3155134314399,27.0551001674958,23.8941249011933,23.7925023431882,30.5346792534399,29.0451822824083,30.7113968596004,22.4427657999067,20.4158351602895,26.9014959813354,28.8762876491624,32.2357493094532,27.4088382294997,28.8779521094923,31.3204437293485,23.7680644121329,28.8469864835543,20.1476812929697,22.8768901398533,23.7230527410754,23.6950589667054,24.3571959291679,17.6003781047783,24.9961843619308,30.6534473296397,28.0306630000516,30.3553122188302,31.4230338875692,26.8587774007057,30.6943482523265,25.358832786797,27.8137953015765,29.048049735635,27.2430665711454,27.593984578087,30.5156900347599,25.2884321283897,32.2577224221197,25.836721359066,26.4508244891714,23.493995546752,44.8695190467103,27.8375674351399,29.6846422005199,32.077586224075,29.6905380340546,33.4094722531652,25.0847684275767,30.0858578840223,35.337052167844,36.6810374415774,35.4163408459548,120.066595939733,22.1284488145089,25.480607530393,23.5285937896298,21.3113708738256,25.1744626981259,23.1193760132135,22.9159717325352,24.7468052844678,42.2772211445511,71.1434115456928,37.289312234125,34.0578361687476,32.5593734212502,31.700680806582,33.6570187854865,33.1797862484712,29.5680805819123,32.0486273968833,34.9343916820591,35.3599582879199,31.1552912072837,28.750074818227,28.5749169671778,30.2711176650264,39.2243563654316,28.6361879852543,38.846099911903,30.05134632917,21.0576657495088,24.774086759556,21.2455884150028,27.8678892802786,21.0660283694853,20.8958181768315,21.1749608793301,18.9055519435001,16.497905504994,25.3480532315138,27.1941803060292,19.5756525067224,24.7676661773321,22.203978040226,22.2636934053283,26.7771356767176,34.7151639858897,25.6100408631201,29.4159127652636,30.6035217436854,44.6739725533534,48.4497866607521,51.9208344242013,58.4072961457104,60.9000280350752,53.9910908766211,56.5879024158229,48.8808668992786,54.1012537821145,49.164761426005,55.2500681888365,46.3537303779422,44.9478483680433,57.2799402116596,39.8909073564217,52.801864867354,48.0959434691805,48.1641103693588,51.8886707377413,52.6071436521698,51.1072231665726,47.7442009197936,55.7707788248227,48.4820686429727,48.8193776342232,45.4372119415587,41.5688915624878,48.698494137193,54.692704938646,38.7742288072094,29.7274587746156,45.6166636468546,36.3132081341624,48.2046596813485,51.6183920739666,61.2131086037913
|short_description=p1@Atpaf2
}}
}}

Revision as of 17:10, 17 April 2012

Short description:p1@Atpaf2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atpaf2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000108721, ENSMUST00000138696, ENSMUST00000154387, ENSMUST00000156966_5end
EntrezGene:Atpaf2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atpaf2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I414.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.69
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E927.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E630.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F138.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A526.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.94
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I934.74
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D126.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D220.42
GP2+ M cell, pool1.CNhs13228.11845-124H924.12
GP2+ M cell, pool2.CNhs13231.11846-124I120.68
GP2+ M cell, pool3.CNhs13240.11847-124I225.64
Ileum epithelium, pool1.CNhs13199.10252-104B928.12
Ileum epithelium, pool2.CNhs13232.10253-104C124.95
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I338.74
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G637.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F539.28
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F738.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H116.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.35
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.29
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.21
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A224.33
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I920.31
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A127.22
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.77
Mouse Granule cells, donor1.CNhs12131.11713-123C320.23
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D121.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E736.59
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C827.86
Mouse Microglia, donor2.CNhs12634.11736-123E837.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.82
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F125.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.71
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.29
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D918.02
Mouse Schwann, donor2.CNhs12573.11746-123F919.35
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F735.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C843.18
Mouse hepatocyte, donor6.CNhs13090.11822-124F453.28
Mouse hepatocyte, donor8.CNhs13091.11824-124F642.11
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A739.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.76
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.86
accessory axillary lymph node, adult.CNhs10475.1063-29H928.74
adrenal gland, adult.CNhs10508.49-24D738.45
adrenal gland, embryo E14.CNhs11038.406-44C530.53
adrenal gland, embryo E16.CNhs11004.1254-43D630.14
adrenal gland, embryo E17.CNhs11043.1263-45I123.06
adrenal gland, embryo E18.CNhs11026.1262-18F531.80
adrenal gland, neonate N00.CNhs11191.1311-23C128.46
adrenal gland, neonate N25.CNhs11223.1377-27I359.44
amnion, adult pregnant day17.5.CNhs10488.583-22A821.75
aorta, adult.CNhs10498.46-23H1136.65
bone (os femoris), adult.CNhs10483.56-12G242.46
bone (os femoris), neonate N02.CNhs11227.1985-43F526.69
bone (os femoris), neonate N16.CNhs11225.1525-43A629.37
bone (os femoris), neonate N20.CNhs11195.1350-25C323.76
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I221.78
colon, adult.CNhs10468.36-18H730.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C731.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D129.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.96
corpora quadrigemina, adult.CNhs10501.16-22A432.80
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F123.25
cortex, adult.CNhs10473.12-14D526.42
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F226.18
diencephalon, neonate N30.CNhs11201.1388-42B227.74
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A226.50
epididymis, adult.CNhs10490.58-23B231.34
eyeball, adult.CNhs10484.31-12G447.35
eyeball, embryo E12.CNhs11016.345-16C622.90
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C917.83
eyeball, embryo E17.CNhs11023.1261-18D421.70
eyeball, neonate N00.CNhs11207.633-15C619.32
eyeball, neonate N01.CNhs11140.1532-43E722.55
eyeball, neonate N02.CNhs11205.1551-44G822.11
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E227.81
forelimb, embryo E12.CNhs10600.359-14H228.56
forelimb, embryo E13.CNhs10589.384-1E227.27
forelimb, embryo E14.CNhs10577.413-26A823.67
forelimb, embryo E15.CNhs11007.437-20E730.03
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B529.22
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.03
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D232.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.54
heart, embryo E11.CNhs10586.331-24E945.36
heart, embryo E12.CNhs11015.353-12F534.01
heart, embryo E13.CNhs11013.376-3I938.35
heart, embryo E14.CNhs10597.403-26D433.14
heart, embryo E15.CNhs11017.431-16C840.73
heart, embryo E16.CNhs11021.457-17C642.11
heart, embryo E17.CNhs11025.479-18E550.69
heart, embryo E18.CNhs11030.1283-20G347.48
heart, neonate N00.CNhs11213.639-21E345.07
heart, neonate N03.CNhs11221.1349-25I245.91
heart, neonate N10.CNhs11118.749-24G151.06
heart, neonate N16.CNhs11209.782-15G148.32
heart, neonate N20.CNhs11127.821-26I647.22
heart, neonate N25.CNhs11196.1351-25D356.20
heart, neonate N30.CNhs11202.1390-42D255.70
hippocampus, adult.CNhs10478.13-16E822.71
hippocampus, neonate N00.CNhs11228.627-43G122.64
intestinal mucosa, adult.CNhs10506.860-29I326.10
intestine, adult.CNhs10496.178-9A336.76
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D527.17
intestine, embryo E15.CNhs10602.976-16D833.89
intestine, embryo E16.CNhs10585.463-22H431.66
intestine, embryo E17.CNhs10582.482-18D332.24
intestine, embryo E18.CNhs10526.1289-20F734.62
intestine, neonate N00.CNhs11126.644-26D127.05
intestine, neonate N01.CNhs11192.1322-23E921.58
intestine, neonate N06.CNhs11102.688-20B831.17
intestine, neonate N07.CNhs11095.720-20F232.23
intestine, neonate N10.CNhs11098.755-23A527.49
intestine, neonate N20.CNhs11187.827-18D125.17
intestine, neonate N25.CNhs11121.1352-25E328.96
intestine, neonate N30.CNhs11131.1384-42G131.07
kidney, embryo E14.CNhs10606.411-4I937.36
kidney, embryo E15.CNhs10997.434-16F827.99
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I231.36
kidney, embryo E18.CNhs11001.1288-20C727.93
kidney, neonate N00.CNhs11214.646-21G728.83
kidney, neonate N10.CNhs11206.758-6D531.74
kidney, neonate N20.CNhs11113.832-19I134.69
kidney, neonate N25.CNhs11122.1353-25F343.96
kidney, neonate N30.CNhs11203.1385-42H145.04
liver, adult pregnant day01.CNhs10466.508-5B246.84
liver, embryo E12.CNhs10601.355-15F837.71
liver, embryo E13.CNhs10524.378-3H645.01
liver, embryo E14.CNhs10594.409-16E139.80
liver, embryo E15.CNhs10520.433-16D743.21
liver, embryo E16.CNhs10523.462-17F538.11
liver, embryo E17.CNhs10510.481-18A334.63
liver, embryo E18.CNhs10579.499-43G431.36
liver, neonate N00.CNhs11117.641-24F434.37
liver, neonate N03.CNhs11123.1345-25G242.56
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H241.68
liver, neonate N10.CNhs11115.751-24B953.36
liver, neonate N20.CNhs11220.823-25A354.05
liver, neonate N25.CNhs11198.1368-26H149.69
liver, neonate N30.CNhs11106.1382-42D155.00
lung, adult.CNhs10474.28-22B121.62
lung, embryo E12.CNhs10522.354-16G228.61
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C526.65
lung, embryo E16.CNhs10998.458-17B628.40
lung, embryo E17.CNhs10605.480-44A627.47
lung, embryo E18.CNhs10583.1287-20I622.85
lung, neonate N00.CNhs11224.640-42C618.15
lung, neonate N06.CNhs11212.683-20E520.49
lung, neonate N07.CNhs11111.715-19A325.47
lung, neonate N10.CNhs11219.750-23E618.18
lung, neonate N20.CNhs11109.822-18A425.73
lung, neonate N25.CNhs11119.1359-25C724.52
lung, neonate N30.CNhs11133.1394-42H223.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.02
mammary gland, adult lactating day02.CNhs10480.595-22B635.41
mammary gland, adult pregnant day19.CNhs10476.588-5H238.63
medulla oblongata, adult.CNhs10477.17-12C232.11
medulla oblongata, neonate N30.CNhs11200.1396-42A327.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C722.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C253.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E319.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.79
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.93
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D918.97
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I922.81
ovary, adult.CNhs10507.91-2I726.97
ovary, embryo E18.CNhs11040.505-44H722.44
ovary, neonate N00.CNhs11217.1299-22I422.32
oviduct, adult pregnant day01.CNhs10500.988-6G627.06
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F423.79
pancreas, embryo E15.CNhs11042.1556-45F230.53
pancreas, embryo E16.CNhs11003.460-26E529.05
pancreas, embryo E17.CNhs10599.1558-45G330.71
pancreas, embryo E18.CNhs10580.1535-43I722.44
pancreas, neonate N00.CNhs11105.645-26G920.42
pancreas, neonate N01.CNhs11138.1531-43D726.90
pancreas, neonate N02.CNhs11139.1539-43D828.88
pancreas, neonate N16.CNhs11136.787-43B632.24
pancreas, neonate N25.CNhs11094.1555-45E227.41
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G831.32
pituitary gland, embryo E12.CNhs11018.346-16E623.77
pituitary gland, embryo E13.CNhs11009.370-44C728.85
pituitary gland, embryo E14.CNhs11037.398-44A520.15
pituitary gland, embryo E15.CNhs10592.427-16B922.88
pituitary gland, embryo E16.CNhs11036.449-43F623.72
pituitary gland, embryo E17.CNhs11039.1265-44F523.70
pituitary gland, neonate N00.CNhs11190.1308-22E924.36
placenta, adult pregnant day10.CNhs10472.539-13I717.60
placenta, adult pregnant day17.CNhs10464.577-18G325.00
prostate, adult.CNhs10470.859-1F830.65
skin, adult.CNhs10492.30-1C328.03
skin, neonate N00.CNhs11124.650-25G430.36
skin, neonate N03.CNhs11215.662-22H331.42
skin, neonate N06.CNhs11097.693-20I526.86
skin, neonate N10.CNhs11108.762-6C430.69
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C927.81
spleen, adult.CNhs10465.25-2G229.05
spleen, embryo E16.CNhs11035.461-43C127.24
spleen, embryo E18.CNhs11011.1271-21F227.59
spleen, neonate N10.CNhs11116.752-24D130.52
spleen, neonate N20.CNhs11112.824-19H125.29
spleen, neonate N25.CNhs11099.1354-25G332.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C625.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C926.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.49
stomach, adult.CNhs10503.33-1H644.87
stomach, embryo E12.CNhs10588.356-43E327.84
stomach, embryo E15.CNhs10603.1252-16G829.68
stomach, embryo E16.CNhs11022.459-17D432.08
stomach, embryo E17.CNhs11006.1035-18D529.69
stomach, embryo E18.CNhs10999.1286-20C633.41
stomach, neonate N03.CNhs11193.1340-24B825.08
stomach, neonate N07.CNhs11210.718-18A930.09
stomach, neonate N25.CNhs11104.1355-25E435.34
stomach, neonate N30.CNhs11134.1386-42I136.68
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G5120.07
testis, embryo E13.CNhs11031.389-23F522.13
testis, embryo E15.CNhs11034.443-27C525.48
testis, embryo E16.CNhs11033.470-26G523.53
testis, embryo E17.CNhs11029.486-18I521.31
testis, embryo E18.CNhs11027.503-18G525.17
testis, neonate N00.CNhs11189.1300-22B723.12
testis, neonate N07.CNhs11222.726-26I422.92
testis, neonate N10.CNhs11204.763-44D924.75
testis, neonate N20.CNhs11110.839-18H342.28
testis, neonate N30.CNhs11130.1391-42E271.14
thymus, adult.CNhs10471.38-12B537.29
thymus, embryo E14.CNhs11041.402-44I434.06
thymus, embryo E15.CNhs11005.430-45I232.56
thymus, embryo E16.CNhs11002.456-26C531.70
thymus, embryo E17.CNhs10581.478-18C133.66
thymus, embryo E18.CNhs10595.1273-19G433.18
thymus, neonate N02.CNhs11181.1541-43F829.57
thymus, neonate N03.CNhs11137.2104-43C732.05
thymus, neonate N06.CNhs11197.681-26C434.93
thymus, neonate N07.CNhs11211.713-19D335.36
thymus, neonate N10.CNhs11194.748-24E431.16
thymus, neonate N20.CNhs11186.820-7A228.75
thymus, neonate N25.CNhs11125.1362-25G728.57
thymus, neonate N30.CNhs11132.1393-42G230.27
tongue, adult.CNhs10499.32-1B439.22
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H328.64
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F738.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.05
urinary bladder, adult.CNhs10481.879-12E421.06
uterus, adult pregnant day19.CNhs10497.590-15F524.77
uterus, adult.CNhs10509.92-27E521.25
vagina, adult.CNhs10502.89-27D527.87
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A425.35
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A527.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.77
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I826.78
whole body, embryo E12.CNhs10587.857-27C934.72
whole body, embryo E13.CNhs10512.372-23H225.61
whole body, embryo E14.5.CNhs10578.420-27D229.42
whole body, embryo E14.CNhs10519.395-14B130.60
whole body, embryo E16.CNhs10514.453-14F244.67
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G548.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G551.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G558.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G560.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G553.99
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G556.59
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G554.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G549.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G555.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G544.95
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G557.28
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G539.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G552.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G548.10
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G548.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G552.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G551.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G547.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G555.77
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G548.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G548.82
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G545.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G541.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G548.70
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G554.69
whole body, embryo E17.5.CNhs10513.490-9F938.77
whole body, embryo E17.CNhs10517.475-3I529.73
whole body, embryo E18.CNhs10516.493-3B345.62
whole body, neonate N00.CNhs10525.657-19C236.31
whole body, neonate N01.CNhs10576.659-23C648.20
whole body, neonate N06.CNhs10515.692-21D151.62
whole body, neonate N10.CNhs10518.761-6B461.21





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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