Personal tools

FFCP PHASE1:Mm9::chr11:98821937..98821987,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:98821937..98821987,+
|short_description=p4@Rara
|description=CAGE_peak_4_at_Rara_5end
|association_with_transcript=152bp_to_NM_001176528,uc007lhz.2_5end
|EntrezGene=19401
|EntrezGene=19401
|HGNC=
|HGNC=
|UniProt=P11416
|UniProt=P11416
|association_with_transcript=152bp_to_NM_001176528,uc007lhz.2_5end
|description=CAGE_peak_4_at_Rara_5end
|id=chr11:98821937..98821987,+
|ontology_enrichment_disease=
|phase1_expression=0.480446541314382,8.02643437570531,4.54999239389536,6.35174843744343,9.5170188689806,2.18243053485457,2.33612640595526,0.903863264091034,41.2510955904384,51.0260667381946,0.171217968225505,0.159544317990673,0.513602189793617,0,0.666219523631325,1.01237633694913,0.699561878128147,0.315462165358238,0.685572168028694,1.27316895539409,1.44573593256819,0,0,3.67982572424835,3.44113921600755,3.44539178469012,3.4460959692726,4.30942465371778,6.27077284206034,5.04060259519861,2.88249663851896,0,0,0,1.1554064790051,1.49611180822643,2.24586291888606,10.8818223991596,14.0640362014284,3.66466620781659,18.8234076169925,9.56263678941824,14.0798002379035,2.39203954153597,1.82478476195126,1.28482726513177,9.38869613217647,1.52617609466313,1.5378032791413,1.94429899074283,1.81982348112971,2.87505128729943,0.167782606057736,0,0.672187598284928,3.60163210450326,3.15186783932632,5.15672092277442,0,0,0,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0,1.49800055259202,0.384218305321555,0.103689612308478,0.405017814995072,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.372798891650601,0.454357159999104,0.529000920747499,6.08715426273523,3.44169550792555,4.0798280022465,9.17495425784289,3.24888208723835,4.92829575807069,4.0728881838208,3.06774580640504,3.63700406444016,1.7666978725517,0.704217098883403,2.56652954828636,2.54805239706646,0,0.432982082022428,0.760079596425296,0.505524445014783,2.96878087269556,0.517875767294343,3.56261133755579,1.04091196059682,2.43572382649713,2.30615497256059,2.56228488939458,1.99900802130698,3.14166478324189,6.17987419335935,1.3013942122792,1.76922110389975,2.58826959915855,2.20841518460394,3.87900202508178,3.72783522436244,0.292780797011547,0,5.36459815938042,1.43778149407104,0.599902730993408,1.14363204365758,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0,1.83310854930569,2.23932547098167,1.51633655060205,2.52530227063769,0.650602214813519,0.229902104433473,0.900310649026746,0.90422890701429,0.408218994907967,0.768682321709099,0.468508622798644,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,1.09597866213787,1.39023624612799,0,1.4404749548556,0.796137067273973,1.40442637462647,1.02939162845886,1.42081749697796,0.414251545071004,0.469052119962192,1.2604344302271,0.473489471170421,0.787056926989615,0.925602677324269,0,1.60964040839772,1.16765342367169,0.987359099480883,1.47750717671186,1.70244500046297,1.31579988682799,1.75640092232841,1.61047702512446,0,0.514523061896422,6.93879444265976,4.23120906661671,0.639864751605702,0.696710015581316,0.77320476793256,3.02525286935014,2.44615848229357,2.47293313946327,9.49058123089023,2.63518327558417,2.26201687920243,2.98434708061726,3.31438948102504,9.88701349519644,4.32276099749388,6.17337947088538,0.569003702859245,0.799739588268102,1.1270773567308,0,1.16371492300575,1.40271639780637,1.70738650235495,1.32849133181642,0.941992367048249,1.23397163921801,4.15033677922008,0.333690211432188,0.982794975566015,1.57403478669398,0,0.964708639009667,0.763877555344259,3.45235364940973,0.810676133875177,2.19649130550465,8.62609239164127,3.72140947668503,2.80833905803104,4.79899868099512,6.45830688678884,6.27176577772377,6.28160846566456,0.568474235311454,0.977789858652155,0.678980343100753,0.469380496577004,3.85264392116176,5.47500374037832,3.31727201358258,3.78324345854858,4.4292937929755,4.46473352240964,5.07976275618788,5.69860440157455,5.20736610893442,0,0,0.983528546038072,0,0.160550589987792,0.35163505977661,2.29508923527346,0.757412781613119,1.57754109708128,1.56175497718655,2.80050417052639,1.91175038362042,2.22798674082394,0.283076530788832,2.02405350837447,3.21481443702443,1.18586333383957,0,2.2710413633323,2.13678724400706,1.30309567482861,1.81467135269789,1.32745138339963,0,0.302323556964751,0.754420319023592,2.36241514304618,0.614870295887855,1.55056975900933,1.45413491791002,2.13898427030833,0.632073515871632,1.05418608574999,5.15677716240934,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0.886701168211368,0.713475270408282,0.987294123612726,1.522324745573,0.938686832254841,0.42366414172764,0.220528398054962,0.49465875882444,1.13025098687134,1.20625849856312,1.19372344003136,1.80554989719567,5.82961673259701,0.370850604021019,2.73393409276564,5.15967169908056,3.70389054739423,0.941842285023455,0.956859594047176,0.686334519619568,4.07948231985253,6.01791244991729,4.14599921413271,8.59203556213602,0.474503990371703,1.01659733563424,1.94409613479242,2.09088296014469,4.58561383866973,2.83215127408124,3.2234847732881,5.49687478166462,1.94422459937689,0,2.81846469342095,0.598066184175915,1.15820943319968,0.388902376688095,0.904118764344118,0.675824501963113,2.8165737274981,2.3436789271911,0.838874755405687,0.483168241652012,0.864090018773596,0.632022241256357,0.810900861160657,0.821687657318618,0.909445760844565,0.716106782669926,0.596044064343795,0.841368146639782,0,0.403865799792591,0.381034033274999,0.403304740547362,0.194915761479505,0.288635524920988,0.467507608726276,0.680191150845634,0,0.0897138566094757,0,2.31827512838629,2.62755465631655,2.56412273974171,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,0.919217542250071,1.11123363900808,1.23621034343337,1.60459604795908,0.252697211763798,1.77435509923168,1.50901073108861,1.591905626988,1.47257850531199,1.49332219284595,0.952587382566147,0.927074607558844,0.964546102318525,2.88460130562315,1.61918812147837,1.02860775715625,2.12970967391205,1.43061713968393,0.726732083161643,1.2234219453993,1.26921911837515,1.28049581010941,1.31534855718921,1.08643291076689,0.561142271657738,1.89816028998679,2.06859412988683,1.22769312950907,2.01417893541756,0.964533054905707,0.999242311751784,0.935726433781634,2.57845264857958,1.14772999241306,2.20591419119516,1.39120701372253
|phase1_expression=0.480446541314382,8.02643437570531,4.54999239389536,6.35174843744343,9.5170188689806,2.18243053485457,2.33612640595526,0.903863264091034,41.2510955904384,51.0260667381946,0.171217968225505,0.159544317990673,0.513602189793617,0,0.666219523631325,1.01237633694913,0.699561878128147,0.315462165358238,0.685572168028694,1.27316895539409,1.44573593256819,0,0,3.67982572424835,3.44113921600755,3.44539178469012,3.4460959692726,4.30942465371778,6.27077284206034,5.04060259519861,2.88249663851896,0,0,0,1.1554064790051,1.49611180822643,2.24586291888606,10.8818223991596,14.0640362014284,3.66466620781659,18.8234076169925,9.56263678941824,14.0798002379035,2.39203954153597,1.82478476195126,1.28482726513177,9.38869613217647,1.52617609466313,1.5378032791413,1.94429899074283,1.81982348112971,2.87505128729943,0.167782606057736,0,0.672187598284928,3.60163210450326,3.15186783932632,5.15672092277442,0,0,0,2.37191172448392,1.77858959222228,1.3498495759221,0.988866362566974,0,1.49800055259202,0.384218305321555,0.103689612308478,0.405017814995072,0,0.571301968807607,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0.372798891650601,0.454357159999104,0.529000920747499,6.08715426273523,3.44169550792555,4.0798280022465,9.17495425784289,3.24888208723835,4.92829575807069,4.0728881838208,3.06774580640504,3.63700406444016,1.7666978725517,0.704217098883403,2.56652954828636,2.54805239706646,0,0.432982082022428,0.760079596425296,0.505524445014783,2.96878087269556,0.517875767294343,3.56261133755579,1.04091196059682,2.43572382649713,2.30615497256059,2.56228488939458,1.99900802130698,3.14166478324189,6.17987419335935,1.3013942122792,1.76922110389975,2.58826959915855,2.20841518460394,3.87900202508178,3.72783522436244,0.292780797011547,0,5.36459815938042,1.43778149407104,0.599902730993408,1.14363204365758,0,0,0,0.347648640384553,0.511430914660661,0.20778804455956,0,1.83310854930569,2.23932547098167,1.51633655060205,2.52530227063769,0.650602214813519,0.229902104433473,0.900310649026746,0.90422890701429,0.408218994907967,0.768682321709099,0.468508622798644,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,1.09597866213787,1.39023624612799,0,1.4404749548556,0.796137067273973,1.40442637462647,1.02939162845886,1.42081749697796,0.414251545071004,0.469052119962192,1.2604344302271,0.473489471170421,0.787056926989615,0.925602677324269,0,1.60964040839772,1.16765342367169,0.987359099480883,1.47750717671186,1.70244500046297,1.31579988682799,1.75640092232841,1.61047702512446,0,0.514523061896422,6.93879444265976,4.23120906661671,0.639864751605702,0.696710015581316,0.77320476793256,3.02525286935014,2.44615848229357,2.47293313946327,9.49058123089023,2.63518327558417,2.26201687920243,2.98434708061726,3.31438948102504,9.88701349519644,4.32276099749388,6.17337947088538,0.569003702859245,0.799739588268102,1.1270773567308,0,1.16371492300575,1.40271639780637,1.70738650235495,1.32849133181642,0.941992367048249,1.23397163921801,4.15033677922008,0.333690211432188,0.982794975566015,1.57403478669398,0,0.964708639009667,0.763877555344259,3.45235364940973,0.810676133875177,2.19649130550465,8.62609239164127,3.72140947668503,2.80833905803104,4.79899868099512,6.45830688678884,6.27176577772377,6.28160846566456,0.568474235311454,0.977789858652155,0.678980343100753,0.469380496577004,3.85264392116176,5.47500374037832,3.31727201358258,3.78324345854858,4.4292937929755,4.46473352240964,5.07976275618788,5.69860440157455,5.20736610893442,0,0,0.983528546038072,0,0.160550589987792,0.35163505977661,2.29508923527346,0.757412781613119,1.57754109708128,1.56175497718655,2.80050417052639,1.91175038362042,2.22798674082394,0.283076530788832,2.02405350837447,3.21481443702443,1.18586333383957,0,2.2710413633323,2.13678724400706,1.30309567482861,1.81467135269789,1.32745138339963,0,0.302323556964751,0.754420319023592,2.36241514304618,0.614870295887855,1.55056975900933,1.45413491791002,2.13898427030833,0.632073515871632,1.05418608574999,5.15677716240934,0.340439605753788,0.18006109403131,0.388076051348264,0.857348140126369,0.886701168211368,0.713475270408282,0.987294123612726,1.522324745573,0.938686832254841,0.42366414172764,0.220528398054962,0.49465875882444,1.13025098687134,1.20625849856312,1.19372344003136,1.80554989719567,5.82961673259701,0.370850604021019,2.73393409276564,5.15967169908056,3.70389054739423,0.941842285023455,0.956859594047176,0.686334519619568,4.07948231985253,6.01791244991729,4.14599921413271,8.59203556213602,0.474503990371703,1.01659733563424,1.94409613479242,2.09088296014469,4.58561383866973,2.83215127408124,3.2234847732881,5.49687478166462,1.94422459937689,0,2.81846469342095,0.598066184175915,1.15820943319968,0.388902376688095,0.904118764344118,0.675824501963113,2.8165737274981,2.3436789271911,0.838874755405687,0.483168241652012,0.864090018773596,0.632022241256357,0.810900861160657,0.821687657318618,0.909445760844565,0.716106782669926,0.596044064343795,0.841368146639782,0,0.403865799792591,0.381034033274999,0.403304740547362,0.194915761479505,0.288635524920988,0.467507608726276,0.680191150845634,0,0.0897138566094757,0,2.31827512838629,2.62755465631655,2.56412273974171,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.853668028770671,1.70174701947806,0.628839487883947,0.919217542250071,1.11123363900808,1.23621034343337,1.60459604795908,0.252697211763798,1.77435509923168,1.50901073108861,1.591905626988,1.47257850531199,1.49332219284595,0.952587382566147,0.927074607558844,0.964546102318525,2.88460130562315,1.61918812147837,1.02860775715625,2.12970967391205,1.43061713968393,0.726732083161643,1.2234219453993,1.26921911837515,1.28049581010941,1.31534855718921,1.08643291076689,0.561142271657738,1.89816028998679,2.06859412988683,1.22769312950907,2.01417893541756,0.964533054905707,0.999242311751784,0.935726433781634,2.57845264857958,1.14772999241306,2.20591419119516,1.39120701372253
|short_description=p4@Rara
}}
}}

Revision as of 18:09, 17 April 2012

Short description:p4@Rara
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rara_5end
Coexpression cluster:NA
Association with transcript: 152bp_to_NM_001176528, uc007lhz.2_5end
EntrezGene:Rara
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rara

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B96.27
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H25.21
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H72.14
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C15.16
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:98821937..98821987,%2B&oldid=746974"