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FFCP PHASE1:Mm9::chr12:107248485..107248549,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:107248485..107248549,+
|short_description=p1@Vrk1
|description=CAGE_peak_1_at_Vrk1_5end
|association_with_transcript=12bp_to_ENSMUST00000021539,ENSMUST00000072040,ENSMUST00000085026,NM_001029843,NM_001029844,NM_011705,uc007ozb.1,uc007ozc.1,uc007ozd.1,uc007oze.1_5end
|EntrezGene=22367
|EntrezGene=22367
|HGNC=
|HGNC=
|UniProt=Q80X41,Q3UWH3
|UniProt=Q80X41,Q3UWH3
|association_with_transcript=12bp_to_ENSMUST00000021539,ENSMUST00000072040,ENSMUST00000085026,NM_001029843,NM_001029844,NM_011705,uc007ozb.1,uc007ozc.1,uc007ozd.1,uc007oze.1_5end
|description=CAGE_peak_1_at_Vrk1_5end
|id=chr12:107248485..107248549,+
|ontology_enrichment_disease=
|phase1_expression=9.92922852049723,3.14077866875425,0.909998478779072,2.72217790176147,1.00179145989269,10.9121526742728,11.2134067485852,28.9236244509131,19.9919985455367,18.9592266320815,13.5262194898149,10.7692414643704,27.0497153291305,26.6632227377942,68.2875011722109,57.9079264734902,74.8531209597117,23.5019313191887,23.7207970137928,29.7072756258621,10.4603246885816,41.5036176019701,70.0015434892347,9.5995453676044,16.5174682368362,3.44539178469012,7.75371593086335,6.46413698057667,8.93110071444957,11.3413558391969,12.6386391073524,23.4961349180064,24.6025915033828,15.8481681015439,24.2635360591071,23.6053196409059,22.2544598325982,65.2909343949576,86.7282232421419,91.6166551954147,62.9407692193185,50.545365886925,59.7177734228319,3.52511090331616,3.04130793658544,3.30384153891027,1.56478268869608,3.05235218932625,2.85592037554813,0.58328969722285,3.49966054063406,2.87505128729943,25.8385213328914,27.5637613964311,20.8378155468328,7.71778308107841,7.73640287834643,4.64104883049698,8.49729135610311,7.93486468908049,5.07065122804943,1.35537812827653,1.77858959222228,5.84934816232909,3.9554654502679,2.1314403448383,1.79760066311043,1.92109152660777,20.7379224616955,13.9056116481641,19.7705463670299,6.56997264128748,5.30084498283872,23.3957426500562,21.6610764501214,14.7075005857603,5.50579404996943,7.78892762319645,7.21950706304344,6.98997324970027,7.22752384459036,9.37644067002168,4.74611098302348,3.37657566019008,6.41752640662602,7.07108605136802,9.8236459751381,8.76077395378913,8.63278603998298,16.3234569830657,8.69593466105033,10.3250865237766,2.03991400112325,2.15881276655127,7.14754059192436,4.03224198387602,10.2524426696179,17.8951838706961,14.5480162577607,11.6602059588412,10.7040999030277,3.84979432242953,0,0,16.6698101578635,22.2956681618087,19.2099289105618,7.30776830201984,26.6706020156587,9.35185476108396,25.6758283613881,19.7902560902892,21.2166257475574,18.9910527096304,17.7558947774914,13.1949920896159,5.93267922562497,6.07317299063629,45.1151381494436,16.1766849947409,25.6176161414057,30.547140947519,7.45567044872489,7.61230072230023,8.58731497935166,9.70736809792647,52.3592094090872,88.1857014560309,53.4965655977602,5.84183493678809,6.8625090422794,24.5025986620086,6.25767552692195,6.64860189058859,3.94797284663164,9.08551073179443,17.0071737630028,25.5034289750691,7.83440551144392,6.10281382070775,26.5445703643916,19.3117767724117,19.2666478891724,20.3451504078215,22.0438257250302,22.8042422107033,16.4915035225123,7.76110112217047,33.1974709116577,28.1768059450051,18.6508191613786,15.3437012699302,17.2389294519871,13.5818344943645,11.7295817752528,21.8937693500343,123.589520967129,92.3878986541827,84.9648863192822,14.4988040774851,20.8728193383176,18.7264543919455,15.1516630774535,13.5767319905709,19.1291219980349,18.6027155800326,15.8281306825775,14.3621371111618,12.8356682932515,12.6408947340903,7.70153690685629,6.57899943413995,6.80605357402257,8.05238512562231,10.5144974282064,19.551876352064,1.32167513193519,11.1069237998689,27.0876078179747,23.6881405297647,22.1652033474001,14.117846723634,12.008414367623,12.5548913234289,12.8122846617018,9.55253937399263,12.8180956488137,13.131127154716,13.6474860983384,8.98819408654222,12.5360068927323,10.7536287557358,16.1217715810119,21.478720370629,16.9061603509621,16.2921062276251,12.8008641530633,13.8868923382831,10.7502113111237,8.11855813887812,7.06494275286187,5.67626954040282,4.44678940630723,51.388292560557,52.4812516952252,67.9083579402258,46.2521076765787,44.3765973944447,38.9577553225572,24.4541716833189,25.2930953769055,29.9271940375009,8.62609239164127,16.0020607497456,13.7296576170407,12.6289438973556,6.45830688678884,3.85954817090694,11.0851914099963,24.0654092948516,27.0521860893763,24.1038021800767,23.4690248288502,16.9181320016234,8.33152743101048,10.7323506321789,11.1920952315396,10.85176979279,13.3942005672289,11.1427054006702,15.1962784041988,10.7040303350319,21.1107797514981,11.9659250440116,12.7858710984949,11.5893433447988,5.77982123956051,6.68106613575558,11.4754461763673,8.58401152494868,21.4545589203055,21.8645696806118,24.1274205460735,21.9851294116348,16.0415045339324,10.190755108398,25.9078849071932,17.2430956167674,14.6256477840214,7.06906896127976,10.3616262202036,9.97167380536629,14.1711654637611,12.2077890999676,5.30980553359851,26.220308704738,27.8137672407571,19.6149282946134,7.97315110778086,11.3751004739253,11.3708448994017,20.3578888507403,17.1118741624666,8.84902922220285,3.16255825724996,8.25084345985495,6.12791290356818,20.887086907632,14.8762486350168,15.2179294872431,13.1231772895282,11.4156043265325,10.0374902567294,6.69822888052118,13.6109590676952,6.99045833850607,4.41056796109924,11.0473789470792,14.6932628293274,18.2145033283031,13.8471919043638,14.4443991775654,11.0762717919343,9.08583979851498,36.0537558483469,24.7664241555867,39.2612398023789,67.2475391506747,60.6922371081352,45.2980782948915,40.6248447685314,36.1074746995038,34.5499934511059,7.63736494412091,23.2506955282134,27.6514475292514,17.0648438498446,14.6361807210128,15.940467153471,14.1607563704062,9.75310777558964,8.63794608547298,10.8876577565106,6.21339313086926,19.7292528539467,23.4740977289047,19.6895603643946,20.0284723994369,17.6948958164492,22.8090769412551,26.2880214566489,21.7441322689397,21.7058842961221,17.6356408202984,14.6895303191511,14.5365115488962,35.4769126757787,28.2455132203275,30.9211558687152,29.360378089467,25.4312134120019,25.0006535001535,29.2425263805663,29.381236934911,26.5199687159399,26.3156343207154,20.076323432389,21.1666051608725,19.6353195665036,5.44152920676507,31.0780334723691,26.3758738431859,30.05134632917,6.56844619709447,5.2551093126331,9.15758121336325,7.93163002592544,4.51414893631827,5.64751842617067,5.06357760157895,3.43737308063638,7.21783365843488,3.42541259885321,9.06472676867641,10.8003600037089,5.40385443869065,6.34399372577886,8.80192529978094,27.9187965001435,23.9414924040619,23.9027048055788,18.2330037801221,24.105513702218,11.2144540154509,12.8903102124937,12.1560683770948,12.8367683836726,15.1618327058278,8.87177549615839,13.9583492625696,12.8288865233739,13.8294329194518,14.8757864595038,15.2413981210584,13.7902347874378,14.2752823143142,12.7746629249025,14.2782952530365,14.057639347802,15.0854435235437,15.4983523465759,11.482366913954,11.4813444106703,12.3537327521848,13.5366699925852,13.6796249947678,13.9878237261238,19.0788372363631,13.1684870117833,13.2981051207011,13.0953933814301,13.1696315008071,12.1531164918119,10.9916654292696,10.9947855969342,12.6773921888496,9.75570493551101,15.2208079192466,13.9120701372253
|phase1_expression=9.92922852049723,3.14077866875425,0.909998478779072,2.72217790176147,1.00179145989269,10.9121526742728,11.2134067485852,28.9236244509131,19.9919985455367,18.9592266320815,13.5262194898149,10.7692414643704,27.0497153291305,26.6632227377942,68.2875011722109,57.9079264734902,74.8531209597117,23.5019313191887,23.7207970137928,29.7072756258621,10.4603246885816,41.5036176019701,70.0015434892347,9.5995453676044,16.5174682368362,3.44539178469012,7.75371593086335,6.46413698057667,8.93110071444957,11.3413558391969,12.6386391073524,23.4961349180064,24.6025915033828,15.8481681015439,24.2635360591071,23.6053196409059,22.2544598325982,65.2909343949576,86.7282232421419,91.6166551954147,62.9407692193185,50.545365886925,59.7177734228319,3.52511090331616,3.04130793658544,3.30384153891027,1.56478268869608,3.05235218932625,2.85592037554813,0.58328969722285,3.49966054063406,2.87505128729943,25.8385213328914,27.5637613964311,20.8378155468328,7.71778308107841,7.73640287834643,4.64104883049698,8.49729135610311,7.93486468908049,5.07065122804943,1.35537812827653,1.77858959222228,5.84934816232909,3.9554654502679,2.1314403448383,1.79760066311043,1.92109152660777,20.7379224616955,13.9056116481641,19.7705463670299,6.56997264128748,5.30084498283872,23.3957426500562,21.6610764501214,14.7075005857603,5.50579404996943,7.78892762319645,7.21950706304344,6.98997324970027,7.22752384459036,9.37644067002168,4.74611098302348,3.37657566019008,6.41752640662602,7.07108605136802,9.8236459751381,8.76077395378913,8.63278603998298,16.3234569830657,8.69593466105033,10.3250865237766,2.03991400112325,2.15881276655127,7.14754059192436,4.03224198387602,10.2524426696179,17.8951838706961,14.5480162577607,11.6602059588412,10.7040999030277,3.84979432242953,0,0,16.6698101578635,22.2956681618087,19.2099289105618,7.30776830201984,26.6706020156587,9.35185476108396,25.6758283613881,19.7902560902892,21.2166257475574,18.9910527096304,17.7558947774914,13.1949920896159,5.93267922562497,6.07317299063629,45.1151381494436,16.1766849947409,25.6176161414057,30.547140947519,7.45567044872489,7.61230072230023,8.58731497935166,9.70736809792647,52.3592094090872,88.1857014560309,53.4965655977602,5.84183493678809,6.8625090422794,24.5025986620086,6.25767552692195,6.64860189058859,3.94797284663164,9.08551073179443,17.0071737630028,25.5034289750691,7.83440551144392,6.10281382070775,26.5445703643916,19.3117767724117,19.2666478891724,20.3451504078215,22.0438257250302,22.8042422107033,16.4915035225123,7.76110112217047,33.1974709116577,28.1768059450051,18.6508191613786,15.3437012699302,17.2389294519871,13.5818344943645,11.7295817752528,21.8937693500343,123.589520967129,92.3878986541827,84.9648863192822,14.4988040774851,20.8728193383176,18.7264543919455,15.1516630774535,13.5767319905709,19.1291219980349,18.6027155800326,15.8281306825775,14.3621371111618,12.8356682932515,12.6408947340903,7.70153690685629,6.57899943413995,6.80605357402257,8.05238512562231,10.5144974282064,19.551876352064,1.32167513193519,11.1069237998689,27.0876078179747,23.6881405297647,22.1652033474001,14.117846723634,12.008414367623,12.5548913234289,12.8122846617018,9.55253937399263,12.8180956488137,13.131127154716,13.6474860983384,8.98819408654222,12.5360068927323,10.7536287557358,16.1217715810119,21.478720370629,16.9061603509621,16.2921062276251,12.8008641530633,13.8868923382831,10.7502113111237,8.11855813887812,7.06494275286187,5.67626954040282,4.44678940630723,51.388292560557,52.4812516952252,67.9083579402258,46.2521076765787,44.3765973944447,38.9577553225572,24.4541716833189,25.2930953769055,29.9271940375009,8.62609239164127,16.0020607497456,13.7296576170407,12.6289438973556,6.45830688678884,3.85954817090694,11.0851914099963,24.0654092948516,27.0521860893763,24.1038021800767,23.4690248288502,16.9181320016234,8.33152743101048,10.7323506321789,11.1920952315396,10.85176979279,13.3942005672289,11.1427054006702,15.1962784041988,10.7040303350319,21.1107797514981,11.9659250440116,12.7858710984949,11.5893433447988,5.77982123956051,6.68106613575558,11.4754461763673,8.58401152494868,21.4545589203055,21.8645696806118,24.1274205460735,21.9851294116348,16.0415045339324,10.190755108398,25.9078849071932,17.2430956167674,14.6256477840214,7.06906896127976,10.3616262202036,9.97167380536629,14.1711654637611,12.2077890999676,5.30980553359851,26.220308704738,27.8137672407571,19.6149282946134,7.97315110778086,11.3751004739253,11.3708448994017,20.3578888507403,17.1118741624666,8.84902922220285,3.16255825724996,8.25084345985495,6.12791290356818,20.887086907632,14.8762486350168,15.2179294872431,13.1231772895282,11.4156043265325,10.0374902567294,6.69822888052118,13.6109590676952,6.99045833850607,4.41056796109924,11.0473789470792,14.6932628293274,18.2145033283031,13.8471919043638,14.4443991775654,11.0762717919343,9.08583979851498,36.0537558483469,24.7664241555867,39.2612398023789,67.2475391506747,60.6922371081352,45.2980782948915,40.6248447685314,36.1074746995038,34.5499934511059,7.63736494412091,23.2506955282134,27.6514475292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|short_description=p1@Vrk1
}}
}}

Revision as of 18:18, 17 April 2012

Short description:p1@Vrk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vrk1_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_ENSMUST00000021539, ENSMUST00000072040, ENSMUST00000085026, NM_001029843, NM_001029844, NM_011705, uc007ozb.1, uc007ozc.1, uc007ozd.1, uc007oze.1_5end
EntrezGene:Vrk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vrk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.91
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E826.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A168.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A357.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A574.85
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.50
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H241.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I970.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.52
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C111.34
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I323.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G624.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F524.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.61
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F722.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H186.73
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H391.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G962.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H250.55
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H459.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I927.56
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.84
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D98.63
Mouse Schwann, donor2.CNhs12573.11746-123F916.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.66
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.31
accessory axillary lymph node, adult.CNhs10475.1063-29H926.67
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C525.68
adrenal gland, embryo E16.CNhs11004.1254-43D619.79
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F518.99
adrenal gland, neonate N00.CNhs11191.1311-23C117.76
adrenal gland, neonate N25.CNhs11223.1377-27I313.19
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G245.12
bone (os femoris), neonate N02.CNhs11227.1985-43F516.18
bone (os femoris), neonate N16.CNhs11225.1525-43A625.62
bone (os femoris), neonate N20.CNhs11195.1350-25C330.55
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H79.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C752.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D188.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D453.50
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F124.50
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.50
epididymis, adult.CNhs10490.58-23B27.83
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C626.54
eyeball, embryo E14.CNhs10521.399-16E219.31
eyeball, embryo E15.CNhs10593.426-16C919.27
eyeball, embryo E17.CNhs11023.1261-18D420.35
eyeball, neonate N00.CNhs11207.633-15C622.04
eyeball, neonate N01.CNhs11140.1532-43E722.80
eyeball, neonate N02.CNhs11205.1551-44G816.49
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E233.20
forelimb, embryo E12.CNhs10600.359-14H228.18
forelimb, embryo E13.CNhs10589.384-1E218.65
forelimb, embryo E14.CNhs10577.413-26A815.34
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I621.89
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8123.59
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D292.39
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D584.96
heart, embryo E11.CNhs10586.331-24E914.50
heart, embryo E12.CNhs11015.353-12F520.87
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D415.15
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C619.13
heart, embryo E17.CNhs11025.479-18E518.60
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E314.36
heart, neonate N03.CNhs11221.1349-25I212.84
heart, neonate N10.CNhs11118.749-24G112.64
heart, neonate N16.CNhs11209.782-15G17.70
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D28.05
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G119.55
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A311.11
intestine, embryo E12.CNhs11019.1251-16I527.09
intestine, embryo E13.CNhs11010.381-16D523.69
intestine, embryo E15.CNhs10602.976-16D822.17
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D312.01
intestine, embryo E18.CNhs10526.1289-20F712.55
intestine, neonate N00.CNhs11126.644-26D112.81
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B812.82
intestine, neonate N07.CNhs11095.720-20F213.13
intestine, neonate N10.CNhs11098.755-23A513.65
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E312.54
intestine, neonate N30.CNhs11131.1384-42G110.75
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F821.48
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G713.89
kidney, neonate N10.CNhs11206.758-6D510.75
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F851.39
liver, embryo E13.CNhs10524.378-3H652.48
liver, embryo E14.CNhs10594.409-16E167.91
liver, embryo E15.CNhs10520.433-16D746.25
liver, embryo E16.CNhs10523.462-17F544.38
liver, embryo E17.CNhs10510.481-18A338.96
liver, embryo E18.CNhs10579.499-43G424.45
liver, neonate N00.CNhs11117.641-24F425.29
liver, neonate N03.CNhs11123.1345-25G229.93
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B913.73
liver, neonate N20.CNhs11220.823-25A312.63
liver, neonate N25.CNhs11198.1368-26H16.46
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B111.09
lung, embryo E12.CNhs10522.354-16G224.07
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C524.10
lung, embryo E16.CNhs10998.458-17B623.47
lung, embryo E17.CNhs10605.480-44A616.92
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C610.73
lung, neonate N06.CNhs11212.683-20E511.19
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C715.20
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.97
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I710.36
ovary, embryo E18.CNhs11040.505-44H79.97
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F426.22
pancreas, embryo E15.CNhs11042.1556-45F227.81
pancreas, embryo E16.CNhs11003.460-26E519.61
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I711.38
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C714.88
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B913.12
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F510.04
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I713.61
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C311.05
skin, neonate N00.CNhs11124.650-25G414.69
skin, neonate N03.CNhs11215.662-22H318.21
skin, neonate N06.CNhs11097.693-20I513.85
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G236.05
spleen, embryo E16.CNhs11035.461-43C124.77
spleen, embryo E18.CNhs11011.1271-21F239.26
spleen, neonate N10.CNhs11116.752-24D167.25
spleen, neonate N20.CNhs11112.824-19H160.69
spleen, neonate N25.CNhs11099.1354-25G345.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C640.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D334.55
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E323.25
stomach, embryo E15.CNhs10603.1252-16G827.65
stomach, embryo E16.CNhs11022.459-17D417.06
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A99.75
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I110.89
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G519.73
testis, embryo E13.CNhs11031.389-23F523.47
testis, embryo E15.CNhs11034.443-27C519.69
testis, embryo E16.CNhs11033.470-26G520.03
testis, embryo E17.CNhs11029.486-18I517.69
testis, embryo E18.CNhs11027.503-18G522.81
testis, neonate N00.CNhs11189.1300-22B726.29
testis, neonate N07.CNhs11222.726-26I421.74
testis, neonate N10.CNhs11204.763-44D921.71
testis, neonate N20.CNhs11110.839-18H317.64
testis, neonate N30.CNhs11130.1391-42E214.69
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I435.48
thymus, embryo E15.CNhs11005.430-45I228.25
thymus, embryo E16.CNhs11002.456-26C530.92
thymus, embryo E17.CNhs10581.478-18C129.36
thymus, embryo E18.CNhs10595.1273-19G425.43
thymus, neonate N02.CNhs11181.1541-43F825.00
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C429.38
thymus, neonate N07.CNhs11211.713-19D326.52
thymus, neonate N10.CNhs11194.748-24E426.32
thymus, neonate N20.CNhs11186.820-7A220.08
thymus, neonate N25.CNhs11125.1362-25G721.17
thymus, neonate N30.CNhs11132.1393-42G219.64
tongue, adult.CNhs10499.32-1B45.44
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H331.08
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F726.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.05
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E59.16
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I827.92
whole body, embryo E12.CNhs10587.857-27C923.94
whole body, embryo E13.CNhs10512.372-23H223.90
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B124.11
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.17
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C69.76
whole body, neonate N06.CNhs10515.692-21D115.22
whole body, neonate N10.CNhs10518.761-6B413.91





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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