Personal tools

FFCP PHASE1:Mm9::chr13:12350402..12350452,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:12350402..12350452,-
|short_description=p1@Mtr
|description=CAGE_peak_1_at_Mtr_5end
|association_with_transcript=-22bp_to_NM_001081128_5end
|EntrezGene=238505
|EntrezGene=238505
|HGNC=
|HGNC=
|UniProt=A6H5Y3
|UniProt=A6H5Y3
|association_with_transcript=-22bp_to_NM_001081128_5end
|description=CAGE_peak_1_at_Mtr_5end
|id=chr13:12350402..12350452,-
|ontology_enrichment_disease=
|phase1_expression=16.1750335575842,0.697950815278722,0.454999239389536,1.51232105653415,0.500895729946347,4.19698179779725,1.86890112476421,16.6569087239633,11.2630977721333,14.9801296846076,12.6701296486874,14.1196721421745,15.2368649638773,16.5224560571905,24.3170126125434,31.1811911780332,37.0767795407918,16.4040325986284,20.5671650408608,25.0389894560838,12.4163203620562,11.9149141441062,14.3659884026414,2.3998863419011,2.75291137280604,1.14846392823004,1.7230479846363,2.37018355954478,1.90023419456374,3.52842181663903,4.21287970245079,17.7808588568697,17.8368788399525,0,6.06588401477677,5.65197794218874,7.75843553797003,9.62622750694888,14.0640362014284,13.088093599345,8.2352408324342,6.83045484958446,9.22469670759192,10.1976422560218,11.5569701590247,11.1963518818626,2.34717403304412,5.88667922227206,4.83309602015838,8.55491555926847,6.29938897314131,2.87505128729943,15.268217151254,16.6833292662609,9.41062637598899,3.34437266846731,9.74213695791773,6.18806510732931,3.03474691289397,4.23192783417626,3.1691570175309,4.40497891689872,3.55717918444456,3.5995988691256,4.94433181283487,4.2628806896766,2.39680088414724,3.84218305321555,6.73982480005105,3.64516033495565,5.04779907243317,3.71346279724945,3.3130281142742,4.77714116938321,5.84657373211242,2.75765635983006,9.91042928994498,4.46905683298157,5.22262213071228,2.90149833006426,3.01909223887952,5.73004707612436,2.79182999001381,4.50210088025344,7.18151764551008,6.18720029494702,6.83384067835694,5.40558392893372,8.48133365331661,10.8067330952703,20.5803786978191,8.60423876981386,0.679971333707751,3.77792234146472,4.54843492213368,6.2723764193627,8.14577636764161,8.35108580632483,3.11743205523443,4.94675404314476,13.661811718338,11.5493829672886,15.2883143823987,0,4.97929394325792,6.08063677140237,4.54972000513305,7.30776830201984,20.4560928081266,17.3677302705845,12.8379141806941,11.8741536541735,11.992005857315,11.4549206819993,15.1689432205059,9.29932775839599,6.17987419335935,14.1707369781513,15.0383793831479,16.6619855445831,14.7963817368464,20.3647606316793,7.45567044872489,8.78342391034641,12.7762491156208,4.59822699375465,20.0091257924887,14.3976655438418,20.7124470129095,5.84183493678809,6.8625090422794,4.64921102817598,3.82413504423008,6.39288643325826,5.194701113989,6.97637431191358,19.0439610400091,16.1729061793121,19.2069296409593,10.5220927943237,17.9566211288531,14.4838325793088,10.4436035287103,15.8240058727501,19.3904022581284,15.6298738747517,13.3993466120412,16.298312356558,14.6586235194333,18.1541836961106,20.2343792788541,14.2477226077924,22.5218271872734,12.1888258282758,11.7295817752528,27.4667288209521,16.8531164955176,17.7570055909153,18.7547909601091,17.6056906655177,13.1334593589414,15.1252131627252,14.4414288706978,13.5767319905709,15.5809784016252,15.8123082430277,19.047411499373,23.0027724463324,14.8103864922132,17.237583728305,15.6462802423502,14.7661987299586,13.3925570327541,16.7758023450465,3.99550902271842,6.38008596751563,1.65209391491899,3.96675849995316,16.423195291213,13.9342003116263,12.7578786708872,10.8909103296605,7.33847544688072,10.2721838100782,3.32170343081158,6.91735609840846,9.0480675168097,9.74886713001639,9.55324026883689,8.08937467788799,4.32276099749388,4.58024928485045,7.01771233526402,14.9665551518745,13.5249282807697,16.0884548997798,13.1887691273986,14.6583863570766,14.987059298449,13.727743762103,16.4848664233444,14.8076596706161,8.59712618552732,15.5165948315967,18.2799865455279,17.9889689907883,21.3003127457928,18.3294641411837,14.7682994033223,12.9463261852865,14.9164408633033,16.748246204473,10.0637744569148,11.5363693777236,9.36113019343682,10.8608917517258,7.89348619496414,9.64887042726734,13.4869828821621,19.138632588819,16.6224275970866,14.7678224624414,21.5915028425422,19.5982321206924,16.1869675802489,19.1230974900643,17.1822307075748,16.1669223443606,15.4671125597762,14.4199716949849,11.9152637487468,15.1881511510587,22.6186925908908,9.79030230873677,8.35999264132362,8.55403913544671,7.06422595946285,5.39173758324135,5.90165803356032,18.935319540328,15.1443945319803,12.4940398174924,17.2338718186239,14.8160654730582,12.9223230967789,15.5692091933858,12.1443210502468,13.4437694639203,13.0444966722353,9.63963949265421,17.8844507362418,21.9020692510724,21.1753047159649,14.5173708215831,9.2921596837974,12.3818124439041,12.09294227859,9.05304382828311,10.335566250827,9.22305443831782,13.4382712447475,17.0860852854428,13.9033977570041,8.84902922220285,6.32511651449993,10.3135543248187,21.7881347682424,12.4242154881604,9.9606186512721,15.2179294872431,11.1724347194632,12.1290795969408,10.5311373185357,8.82948352432338,22.7631556821799,7.83778662196135,7.49796553386871,8.90385765883992,17.115229229766,10.5547618624273,7.40108532819446,6.56563598980245,6.41257840585672,7.6024373824309,23.9219233116994,19.8131393244694,19.4454253738197,27.5017947226849,28.0223166828102,26.3094899187501,20.7373684592503,20.2929605869304,23.0793956253388,1.90934123603023,17.0821436533813,13.2157653632452,11.7725821495763,12.5452977608681,9.38959024108564,11.8680624818642,11.7367907129977,8.63794608547298,5.70305882483889,16.1548221402601,21.4203316699992,26.4644286497842,30.2789037536489,45.6960292608512,28.2860013416231,28.8914974589231,27.4615938431064,30.3376216686404,49.8081886022127,35.2712816405969,33.4114807259124,13.2724670663835,14.3934902856017,16.5364641035372,16.3700236952022,15.3962958274034,12.3182439964384,13.7022812452764,13.1443679185374,16.6594642414444,18.213426790545,11.7966636610103,13.5466454228256,14.1431407211284,16.7133970119644,8.61575457737803,13.9851150625661,14.0850754876877,14.1023077745826,12.9437028001568,13.1377732815827,10.8059458317686,5.14484109789758,5.517293144389,3.95326289831947,6.44455331110048,2.29158205375759,5.67115501734169,8.22099023724771,9.06472676867641,6.07520250208625,3.60256962579376,4.98456649882625,8.28416498802912,15.5681021376265,18.3551441764474,14.5123564891014,15.0726164582342,17.8171188233785,14.5236371675511,14.446037307105,16.0707344646337,17.0087181083662,14.4037410705365,17.7435509923168,14.9014809695,14.6080751653017,14.7898102055248,15.45014114906,16.1939855036245,14.4855407431069,14.4681915347779,18.9559514369521,13.689499572499,16.4577241144999,19.3448628713678,15.0214799666812,14.3892952466005,19.7629698872194,16.3306193230936,15.7318056670584,14.7319038405192,16.8397101168869,9.53941861818155,13.64302708428,12.9040871911988,15.9600106836179,17.3529262128282,12.5389297137742,10.9916654292696,12.8662384644975,13.7517474590911,16.8333732220582,12.5737108898124,11.5933917810211
|phase1_expression=16.1750335575842,0.697950815278722,0.454999239389536,1.51232105653415,0.500895729946347,4.19698179779725,1.86890112476421,16.6569087239633,11.2630977721333,14.9801296846076,12.6701296486874,14.1196721421745,15.2368649638773,16.5224560571905,24.3170126125434,31.1811911780332,37.0767795407918,16.4040325986284,20.5671650408608,25.0389894560838,12.4163203620562,11.9149141441062,14.3659884026414,2.3998863419011,2.75291137280604,1.14846392823004,1.7230479846363,2.37018355954478,1.90023419456374,3.52842181663903,4.21287970245079,17.7808588568697,17.8368788399525,0,6.06588401477677,5.65197794218874,7.75843553797003,9.62622750694888,14.0640362014284,13.088093599345,8.2352408324342,6.83045484958446,9.22469670759192,10.1976422560218,11.5569701590247,11.1963518818626,2.34717403304412,5.88667922227206,4.83309602015838,8.55491555926847,6.29938897314131,2.87505128729943,15.268217151254,16.6833292662609,9.41062637598899,3.34437266846731,9.74213695791773,6.18806510732931,3.03474691289397,4.23192783417626,3.1691570175309,4.40497891689872,3.55717918444456,3.5995988691256,4.94433181283487,4.2628806896766,2.39680088414724,3.84218305321555,6.73982480005105,3.64516033495565,5.04779907243317,3.71346279724945,3.3130281142742,4.77714116938321,5.84657373211242,2.75765635983006,9.91042928994498,4.46905683298157,5.22262213071228,2.90149833006426,3.01909223887952,5.73004707612436,2.79182999001381,4.50210088025344,7.18151764551008,6.18720029494702,6.83384067835694,5.40558392893372,8.48133365331661,10.8067330952703,20.5803786978191,8.60423876981386,0.679971333707751,3.77792234146472,4.54843492213368,6.2723764193627,8.14577636764161,8.35108580632483,3.11743205523443,4.94675404314476,13.661811718338,11.5493829672886,15.2883143823987,0,4.97929394325792,6.08063677140237,4.54972000513305,7.30776830201984,20.4560928081266,17.3677302705845,12.8379141806941,11.8741536541735,11.992005857315,11.4549206819993,15.1689432205059,9.29932775839599,6.17987419335935,14.1707369781513,15.0383793831479,16.6619855445831,14.7963817368464,20.3647606316793,7.45567044872489,8.78342391034641,12.7762491156208,4.59822699375465,20.0091257924887,14.3976655438418,20.7124470129095,5.84183493678809,6.8625090422794,4.64921102817598,3.82413504423008,6.39288643325826,5.194701113989,6.97637431191358,19.0439610400091,16.1729061793121,19.2069296409593,10.5220927943237,17.9566211288531,14.4838325793088,10.4436035287103,15.8240058727501,19.3904022581284,15.6298738747517,13.3993466120412,16.298312356558,14.6586235194333,18.1541836961106,20.2343792788541,14.2477226077924,22.5218271872734,12.1888258282758,11.7295817752528,27.4667288209521,16.8531164955176,17.7570055909153,18.7547909601091,17.6056906655177,13.1334593589414,15.1252131627252,14.4414288706978,13.5767319905709,15.5809784016252,15.8123082430277,19.047411499373,23.0027724463324,14.8103864922132,17.237583728305,15.6462802423502,14.7661987299586,13.3925570327541,16.7758023450465,3.99550902271842,6.38008596751563,1.65209391491899,3.96675849995316,16.423195291213,13.9342003116263,12.7578786708872,10.8909103296605,7.33847544688072,10.2721838100782,3.32170343081158,6.91735609840846,9.0480675168097,9.74886713001639,9.55324026883689,8.08937467788799,4.32276099749388,4.58024928485045,7.01771233526402,14.9665551518745,13.5249282807697,16.0884548997798,13.1887691273986,14.6583863570766,14.987059298449,13.727743762103,16.4848664233444,14.8076596706161,8.59712618552732,15.5165948315967,18.2799865455279,17.9889689907883,21.3003127457928,18.3294641411837,14.7682994033223,12.9463261852865,14.9164408633033,16.748246204473,10.0637744569148,11.5363693777236,9.36113019343682,10.8608917517258,7.89348619496414,9.64887042726734,13.4869828821621,19.138632588819,16.6224275970866,14.7678224624414,21.5915028425422,19.5982321206924,16.1869675802489,19.1230974900643,17.1822307075748,16.1669223443606,15.4671125597762,14.4199716949849,11.9152637487468,15.1881511510587,22.6186925908908,9.79030230873677,8.35999264132362,8.55403913544671,7.06422595946285,5.39173758324135,5.90165803356032,18.935319540328,15.1443945319803,12.4940398174924,17.2338718186239,14.8160654730582,12.9223230967789,15.5692091933858,12.1443210502468,13.4437694639203,13.0444966722353,9.63963949265421,17.8844507362418,21.9020692510724,21.1753047159649,14.5173708215831,9.2921596837974,12.3818124439041,12.09294227859,9.05304382828311,10.335566250827,9.22305443831782,13.4382712447475,17.0860852854428,13.9033977570041,8.84902922220285,6.32511651449993,10.3135543248187,21.7881347682424,12.4242154881604,9.9606186512721,15.2179294872431,11.1724347194632,12.1290795969408,10.5311373185357,8.82948352432338,22.7631556821799,7.83778662196135,7.49796553386871,8.90385765883992,17.115229229766,10.5547618624273,7.40108532819446,6.56563598980245,6.41257840585672,7.6024373824309,23.9219233116994,19.8131393244694,19.4454253738197,27.5017947226849,28.0223166828102,26.3094899187501,20.7373684592503,20.2929605869304,23.0793956253388,1.90934123603023,17.0821436533813,13.2157653632452,11.7725821495763,12.5452977608681,9.38959024108564,11.8680624818642,11.7367907129977,8.63794608547298,5.70305882483889,16.1548221402601,21.4203316699992,26.4644286497842,30.2789037536489,45.6960292608512,28.2860013416231,28.8914974589231,27.4615938431064,30.3376216686404,49.8081886022127,35.2712816405969,33.4114807259124,13.2724670663835,14.3934902856017,16.5364641035372,16.3700236952022,15.3962958274034,12.3182439964384,13.7022812452764,13.1443679185374,16.6594642414444,18.213426790545,11.7966636610103,13.5466454228256,14.1431407211284,16.7133970119644,8.61575457737803,13.9851150625661,14.0850754876877,14.1023077745826,12.9437028001568,13.1377732815827,10.8059458317686,5.14484109789758,5.517293144389,3.95326289831947,6.44455331110048,2.29158205375759,5.67115501734169,8.22099023724771,9.06472676867641,6.07520250208625,3.60256962579376,4.98456649882625,8.28416498802912,15.5681021376265,18.3551441764474,14.5123564891014,15.0726164582342,17.8171188233785,14.5236371675511,14.446037307105,16.0707344646337,17.0087181083662,14.4037410705365,17.7435509923168,14.9014809695,14.6080751653017,14.7898102055248,15.45014114906,16.1939855036245,14.4855407431069,14.4681915347779,18.9559514369521,13.689499572499,16.4577241144999,19.3448628713678,15.0214799666812,14.3892952466005,19.7629698872194,16.3306193230936,15.7318056670584,14.7319038405192,16.8397101168869,9.53941861818155,13.64302708428,12.9040871911988,15.9600106836179,17.3529262128282,12.5389297137742,10.9916654292696,12.8662384644975,13.7517474590911,16.8333732220582,12.5737108898124,11.5933917810211
|short_description=p1@Mtr
}}
}}

Revision as of 19:23, 17 April 2012

Short description:p1@Mtr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mtr_5end
Coexpression cluster:NA
Association with transcript: -22bp_to_NM_001081128_5end
EntrezGene:Mtr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mtr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E916.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.18
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.57
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.78
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.27
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.85
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.18
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D98.48
Mouse Schwann, donor2.CNhs12573.11746-123F910.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G613.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.31
accessory axillary lymph node, adult.CNhs10475.1063-29H920.46
adrenal gland, adult.CNhs10508.49-24D717.37
adrenal gland, embryo E14.CNhs11038.406-44C512.84
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F511.45
adrenal gland, neonate N00.CNhs11191.1311-23C115.17
adrenal gland, neonate N25.CNhs11223.1377-27I39.30
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F516.66
bone (os femoris), neonate N16.CNhs11225.1525-43A614.80
bone (os femoris), neonate N20.CNhs11195.1350-25C320.36
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.01
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.71
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.17
epididymis, adult.CNhs10490.58-23B219.21
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C617.96
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D415.82
eyeball, neonate N00.CNhs11207.633-15C619.39
eyeball, neonate N01.CNhs11140.1532-43E715.63
eyeball, neonate N02.CNhs11205.1551-44G813.40
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E214.66
forelimb, embryo E12.CNhs10600.359-14H218.15
forelimb, embryo E13.CNhs10589.384-1E220.23
forelimb, embryo E14.CNhs10577.413-26A814.25
forelimb, embryo E15.CNhs11007.437-20E722.52
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B511.73
gonad, embryo E13.CNhs11044.1564-45I627.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.76
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E917.61
heart, embryo E12.CNhs11015.353-12F513.13
heart, embryo E13.CNhs11013.376-3I915.13
heart, embryo E14.CNhs10597.403-26D414.44
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C615.58
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G319.05
heart, neonate N00.CNhs11213.639-21E323.00
heart, neonate N03.CNhs11221.1349-25I214.81
heart, neonate N10.CNhs11118.749-24G117.24
heart, neonate N16.CNhs11209.782-15G115.65
heart, neonate N20.CNhs11127.821-26I614.77
heart, neonate N25.CNhs11196.1351-25D313.39
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G16.38
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I516.42
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B89.05
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A59.55
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F814.97
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I216.09
kidney, embryo E18.CNhs11001.1288-20C713.19
kidney, neonate N00.CNhs11214.646-21G714.66
kidney, neonate N10.CNhs11206.758-6D514.99
kidney, neonate N20.CNhs11113.832-19I113.73
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H114.81
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H618.28
liver, embryo E14.CNhs10594.409-16E117.99
liver, embryo E15.CNhs10520.433-16D721.30
liver, embryo E16.CNhs10523.462-17F518.33
liver, embryo E17.CNhs10510.481-18A314.77
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F414.92
liver, neonate N03.CNhs11123.1345-25G216.75
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B113.49
lung, embryo E12.CNhs10522.354-16G219.14
lung, embryo E14.CNhs10604.404-26F816.62
lung, embryo E15.CNhs11020.432-17C514.77
lung, embryo E16.CNhs10998.458-17B621.59
lung, embryo E17.CNhs10605.480-44A619.60
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C619.12
lung, neonate N06.CNhs11212.683-20E517.18
lung, neonate N07.CNhs11111.715-19A316.17
lung, neonate N10.CNhs11219.750-23E615.47
lung, neonate N20.CNhs11109.822-18A414.42
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H215.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A19.79
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.94
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.14
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.14
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I717.88
ovary, embryo E18.CNhs11040.505-44H721.90
ovary, neonate N00.CNhs11217.1299-22I421.18
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D717.09
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E612.42
pituitary gland, embryo E13.CNhs11009.370-44C79.96
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B911.17
pituitary gland, embryo E16.CNhs11036.449-43F612.13
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I722.76
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F87.50
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G417.12
skin, neonate N03.CNhs11215.662-22H310.55
skin, neonate N06.CNhs11097.693-20I57.40
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G223.92
spleen, embryo E16.CNhs11035.461-43C119.81
spleen, embryo E18.CNhs11011.1271-21F219.45
spleen, neonate N10.CNhs11116.752-24D127.50
spleen, neonate N20.CNhs11112.824-19H128.02
spleen, neonate N25.CNhs11099.1354-25G326.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.08
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E317.08
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A911.74
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C116.15
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F526.46
testis, embryo E15.CNhs11034.443-27C530.28
testis, embryo E16.CNhs11033.470-26G545.70
testis, embryo E17.CNhs11029.486-18I528.29
testis, embryo E18.CNhs11027.503-18G528.89
testis, neonate N00.CNhs11189.1300-22B727.46
testis, neonate N07.CNhs11222.726-26I430.34
testis, neonate N10.CNhs11204.763-44D949.81
testis, neonate N20.CNhs11110.839-18H335.27
testis, neonate N30.CNhs11130.1391-42E233.41
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I414.39
thymus, embryo E15.CNhs11005.430-45I216.54
thymus, embryo E16.CNhs11002.456-26C516.37
thymus, embryo E17.CNhs10581.478-18C115.40
thymus, embryo E18.CNhs10595.1273-19G412.32
thymus, neonate N02.CNhs11181.1541-43F813.70
thymus, neonate N03.CNhs11137.2104-43C713.14
thymus, neonate N06.CNhs11197.681-26C416.66
thymus, neonate N07.CNhs11211.713-19D318.21
thymus, neonate N10.CNhs11194.748-24E411.80
thymus, neonate N20.CNhs11186.820-7A213.55
thymus, neonate N25.CNhs11125.1362-25G714.14
thymus, neonate N30.CNhs11132.1393-42G216.71
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.10
urinary bladder, adult.CNhs10481.879-12E412.94
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E510.81
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I815.57
whole body, embryo E12.CNhs10587.857-27C918.36
whole body, embryo E13.CNhs10512.372-23H214.51
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B117.82
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.61
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.34
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.35
whole body, embryo E17.5.CNhs10513.490-9F912.54
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C616.83
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B411.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:12350402..12350452,-&oldid=752210"