Personal tools

FFCP PHASE1:Mm9::chr13:24923222..24923277,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:24923222..24923277,-
|short_description=p2@Acot13
|description=CAGE_peak_2_at_Acot13_5end
|association_with_transcript=80bp_to_NM_025790,uc007pwj.1_5end
|EntrezGene=66834
|EntrezGene=66834
|HGNC=
|HGNC=
|UniProt=Q4VA32,Q9CQR4
|UniProt=Q4VA32,Q9CQR4
|association_with_transcript=80bp_to_NM_025790,uc007pwj.1_5end
|description=CAGE_peak_2_at_Acot13_5end
|id=chr13:24923222..24923277,-
|ontology_enrichment_disease=
|phase1_expression=0.640595388419176,12.2141392673776,10.9199817453489,10.8887116070459,9.01612313903425,7.38668796412315,6.54115393667472,0.387369970324729,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.411343300817216,0,2.55129870453209,0.397163804803541,1.04479915655574,15.0392877425802,11.0116454912242,14.9300310669905,17.6612418425221,17.6686410802429,18.812318526181,15.6258680451157,6.65191531965914,0,0,0,8.66554859253824,8.97667084935859,6.94175811292055,0.418531630736908,0,0,0.588231488031014,0,0,0.881277725829041,0.811015449756117,1.46837401729345,0,1.09012578190223,0.659058548203415,1.36100929351998,0.419959264876088,1.43752564364972,0.503347818173209,0.725362142011344,0.336093799142464,0.514518872071894,1.14613375975503,6.70373719960675,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,1.91531007127782,1.0752457327937,0.395658863190582,0.457438218012048,0,1.3959149950069,1.12552522006336,1.5279824777681,0.294628585473668,0.711858403995515,0.186399445825301,0.454357159999104,0.302286240427142,1.15945795480671,15.487629785665,6.79971333707751,7.55584468292944,11.695975514058,18.8171292580881,17.8364413567325,0.852151612890289,0.779358013808606,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.73192832808971,1.01343946190039,1.51657333504435,15.8715592809493,0.517875767294343,1.1875371125186,0.173485326766136,0,0.691846491768175,1.20578112442098,1.76383060703557,5.02666365318702,2.47194967734374,53.6463614172872,3.5384422077995,4.36770494858005,9.49618529379692,10.6672555689749,7.45567044872489,1.75668478206928,2.93225389538837,15.3274233125155,0,0.599902730993408,0.127070227073065,1.49790639404823,1.83000241127451,0,0.347648640384553,0.767146371990992,1.0389402227978,1.29793010454206,0.407357455401265,5.349499736234,3.28539585963777,7.15502310014011,0.780722657776222,0.919608417733892,1.62055916824814,0.90422890701429,0.340182495756639,1.0249097622788,1.03071897015702,7.24369438069244,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,16.7771875753757,18.5275587385066,21.0672611909387,22.490749880595,26.7599355176469,33.0131621578989,51.6225357345905,54.7277738855223,55.5803029667727,55.9503489705834,85.6954162492877,124.116347414705,153.071386834323,142.268474708601,157.155716368395,1.05144974282064,0.205809224758569,15.5296828002385,10.3135720998782,0.213288250535234,0.464473343720877,2.83508414908605,8.87407508342707,9.33987784148455,12.1744400712038,13.7613427847908,8.72904460037258,4.02136334080431,6.96347652144028,5.8489226135736,12.5834717211591,15.561939590978,19.9141273254367,0.948339504765408,1.14248512609729,1.1270773567308,6.51684249105006,6.0125271021964,5.54072977133517,8.47369597465048,21.8463019009811,18.6828486131236,26.1601987514217,28.1629995732791,1.66845105716094,1.76903095601883,1.12431056192427,1.62288097110802,2.17059443777175,3.31013607315846,4.31544206176216,3.72911021582581,0.549122826376163,7.18841032636773,4.83783231969054,3.74445207737473,14.6495749209325,15.9663698034502,14.9557491622644,1.66277871149944,0.757965647081939,0.814824882210129,0.678980343100753,0.704070744865506,1.17254380209271,2.14239276797412,0.585400943573396,0.788175720530955,1.55025282754142,0.956728611944923,1.96635977658886,1.55416483679306,1.88043776155965,1.50791283939272,0,1.96705709207614,2.48343071674259,2.88991061978026,1.87538698547525,0,30.8014531189335,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,1.55959071857676,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,2.65490276679926,0.485561272309963,2.11626489875326,2.64047111658257,0.295301892880773,1.53717573971964,2.06742634534577,1.81766864738753,4.27796854061666,2.21225730555071,3.16255825724996,2.06271086496374,0.680879211507576,1.62054984628179,0.646793418913773,0.643011105094777,0.532020700926821,0.178368817602071,1.31639216481697,0.913394847343798,0.704015124191131,1.69465656691056,0.220528398054962,2.80306630000516,1.45317984026315,1.08563264870681,0.596861720015682,1.14898629821543,11.0762717919343,2.78137953015765,0.854354403989263,0.412773735926445,0.925972636848558,1.13021074202815,1.6403307326523,1.14389086603261,0.339956859987711,0,0.276399947608848,19.0934123603023,0.158167996790568,0.203319467126849,2.16010681643603,1.67270636811575,3.49380101993884,3.50647300600534,4.05001933054146,13.0877970992015,7.38805347763219,5.59205381778233,1.12738587736838,0.598066184175915,0.165458490457098,0.777804753376191,2.19571699912143,2.36538575687089,1.40828686374905,0.2604087696879,1.46803082195995,0,4.03242008761012,1.89606672376907,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.738447635872886,1.00966449948148,0.228620419965,0.504130925684203,0.194915761479505,0.0962118416403295,0.350630706544707,28.5680283355166,0.443971906748129,1.34570784914214,0.335769232728157,0.965947970160952,0.563047426353546,0.36630324853453,1.07184189539533,1.50471631210609,1.6942555278512,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,0,1.35096360967266,1.35942722695261,1.03552062350364,1.24544817101012,0.798049746802062,0.170733605754134,1.94485373654635,1.25767897576789,3.8607136774503,9.77885602327107,9.06554251851134,8.02298023979538,7.07552192938633,6.08350319736575,10.7517014590063,8.42773567228942,9.21962194630118,8.32814299856392,7.1444053692461,5.44656331940821,7.7163688185482,10.714233420886,6.18235464564469,8.57173130963539,9.05126611412621,8.82213902805088,9.1568242478367,8.09340671571843,8.96914843651771,8.59761472502031,5.5244639401947,8.55565917228929,6.17256498823512,8.42308628681636,8.17587203717177,9.82154503607254,7.90177890048427,4.24394544158511,2.74791635731741,6.55008503647143,7.30561583764214,10.1382815996487,11.9119366324538,19.245030356495
|phase1_expression=0.640595388419176,12.2141392673776,10.9199817453489,10.8887116070459,9.01612313903425,7.38668796412315,6.54115393667472,0.387369970324729,0,0.234064526321993,0,0.0797721589953364,0.171200729931206,0,0.666219523631325,1.01237633694913,1.39912375625629,0,0.411343300817216,0,2.55129870453209,0.397163804803541,1.04479915655574,15.0392877425802,11.0116454912242,14.9300310669905,17.6612418425221,17.6686410802429,18.812318526181,15.6258680451157,6.65191531965914,0,0,0,8.66554859253824,8.97667084935859,6.94175811292055,0.418531630736908,0,0,0.588231488031014,0,0,0.881277725829041,0.811015449756117,1.46837401729345,0,1.09012578190223,0.659058548203415,1.36100929351998,0.419959264876088,1.43752564364972,0.503347818173209,0.725362142011344,0.336093799142464,0.514518872071894,1.14613375975503,6.70373719960675,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0.988866362566974,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,1.91531007127782,1.0752457327937,0.395658863190582,0.457438218012048,0,1.3959149950069,1.12552522006336,1.5279824777681,0.294628585473668,0.711858403995515,0.186399445825301,0.454357159999104,0.302286240427142,1.15945795480671,15.487629785665,6.79971333707751,7.55584468292944,11.695975514058,18.8171292580881,17.8364413567325,0.852151612890289,0.779358013808606,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.73192832808971,1.01343946190039,1.51657333504435,15.8715592809493,0.517875767294343,1.1875371125186,0.173485326766136,0,0.691846491768175,1.20578112442098,1.76383060703557,5.02666365318702,2.47194967734374,53.6463614172872,3.5384422077995,4.36770494858005,9.49618529379692,10.6672555689749,7.45567044872489,1.75668478206928,2.93225389538837,15.3274233125155,0,0.599902730993408,0.127070227073065,1.49790639404823,1.83000241127451,0,0.347648640384553,0.767146371990992,1.0389402227978,1.29793010454206,0.407357455401265,5.349499736234,3.28539585963777,7.15502310014011,0.780722657776222,0.919608417733892,1.62055916824814,0.90422890701429,0.340182495756639,1.0249097622788,1.03071897015702,7.24369438069244,0.431135985865684,0.567318240503458,0.175951124163949,0.657587197282725,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0.257347907114715,0.284163499395593,16.7771875753757,18.5275587385066,21.0672611909387,22.490749880595,26.7599355176469,33.0131621578989,51.6225357345905,54.7277738855223,55.5803029667727,55.9503489705834,85.6954162492877,124.116347414705,153.071386834323,142.268474708601,157.155716368395,1.05144974282064,0.205809224758569,15.5296828002385,10.3135720998782,0.213288250535234,0.464473343720877,2.83508414908605,8.87407508342707,9.33987784148455,12.1744400712038,13.7613427847908,8.72904460037258,4.02136334080431,6.96347652144028,5.8489226135736,12.5834717211591,15.561939590978,19.9141273254367,0.948339504765408,1.14248512609729,1.1270773567308,6.51684249105006,6.0125271021964,5.54072977133517,8.47369597465048,21.8463019009811,18.6828486131236,26.1601987514217,28.1629995732791,1.66845105716094,1.76903095601883,1.12431056192427,1.62288097110802,2.17059443777175,3.31013607315846,4.31544206176216,3.72911021582581,0.549122826376163,7.18841032636773,4.83783231969054,3.74445207737473,14.6495749209325,15.9663698034502,14.9557491622644,1.66277871149944,0.757965647081939,0.814824882210129,0.678980343100753,0.704070744865506,1.17254380209271,2.14239276797412,0.585400943573396,0.788175720530955,1.55025282754142,0.956728611944923,1.96635977658886,1.55416483679306,1.88043776155965,1.50791283939272,0,1.96705709207614,2.48343071674259,2.88991061978026,1.87538698547525,0,30.8014531189335,0.631016438832513,0.780877488593277,0.430846795465598,0.955875191810208,1.55959071857676,0.283076530788832,0.404810701674894,0.876767573733936,0.790575555893047,0.963963949265421,0.425820255624806,0.178065603667255,0.162886959353576,0.494910368917606,2.65490276679926,0.485561272309963,2.11626489875326,2.64047111658257,0.295301892880773,1.53717573971964,2.06742634534577,1.81766864738753,4.27796854061666,2.21225730555071,3.16255825724996,2.06271086496374,0.680879211507576,1.62054984628179,0.646793418913773,0.643011105094777,0.532020700926821,0.178368817602071,1.31639216481697,0.913394847343798,0.704015124191131,1.69465656691056,0.220528398054962,2.80306630000516,1.45317984026315,1.08563264870681,0.596861720015682,1.14898629821543,11.0762717919343,2.78137953015765,0.854354403989263,0.412773735926445,0.925972636848558,1.13021074202815,1.6403307326523,1.14389086603261,0.339956859987711,0,0.276399947608848,19.0934123603023,0.158167996790568,0.203319467126849,2.16010681643603,1.67270636811575,3.49380101993884,3.50647300600534,4.05001933054146,13.0877970992015,7.38805347763219,5.59205381778233,1.12738587736838,0.598066184175915,0.165458490457098,0.777804753376191,2.19571699912143,2.36538575687089,1.40828686374905,0.2604087696879,1.46803082195995,0,4.03242008761012,1.89606672376907,0.405450430580328,0.616265742988964,0.389762468933385,0.179026695667481,0.993406773906324,0.120195449519969,0.738447635872886,1.00966449948148,0.228620419965,0.504130925684203,0.194915761479505,0.0962118416403295,0.350630706544707,28.5680283355166,0.443971906748129,1.34570784914214,0.335769232728157,0.965947970160952,0.563047426353546,0.36630324853453,1.07184189539533,1.50471631210609,1.6942555278512,0.460325236507177,1.14579102687879,0.515559547031063,0.685082519770642,0.755393897389701,0,1.35096360967266,1.35942722695261,1.03552062350364,1.24544817101012,0.798049746802062,0.170733605754134,1.94485373654635,1.25767897576789,3.8607136774503,9.77885602327107,9.06554251851134,8.02298023979538,7.07552192938633,6.08350319736575,10.7517014590063,8.42773567228942,9.21962194630118,8.32814299856392,7.1444053692461,5.44656331940821,7.7163688185482,10.714233420886,6.18235464564469,8.57173130963539,9.05126611412621,8.82213902805088,9.1568242478367,8.09340671571843,8.96914843651771,8.59761472502031,5.5244639401947,8.55565917228929,6.17256498823512,8.42308628681636,8.17587203717177,9.82154503607254,7.90177890048427,4.24394544158511,2.74791635731741,6.55008503647143,7.30561583764214,10.1382815996487,11.9119366324538,19.245030356495
|short_description=p2@Acot13
}}
}}

Revision as of 19:36, 17 April 2012

Short description:p2@Acot13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Acot13_5end
Coexpression cluster:NA
Association with transcript: 80bp_to_NM_025790, uc007pwj.1_5end
EntrezGene:Acot13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Acot13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I217.67
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F618.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.87
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H153.65
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H715.33
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E916.78
heart, embryo E12.CNhs11015.353-12F518.53
heart, embryo E13.CNhs11013.376-3I921.07
heart, embryo E14.CNhs10597.403-26D422.49
heart, embryo E15.CNhs11017.431-16C826.76
heart, embryo E16.CNhs11021.457-17C633.01
heart, embryo E17.CNhs11025.479-18E551.62
heart, embryo E18.CNhs11030.1283-20G354.73
heart, neonate N00.CNhs11213.639-21E355.58
heart, neonate N03.CNhs11221.1349-25I255.95
heart, neonate N10.CNhs11118.749-24G185.70
heart, neonate N16.CNhs11209.782-15G1124.12
heart, neonate N20.CNhs11127.821-26I6153.07
heart, neonate N25.CNhs11196.1351-25D3142.27
heart, neonate N30.CNhs11202.1390-42D2157.16
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I315.53
intestine, adult.CNhs10496.178-9A310.31
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H48.87
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F712.17
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G119.91
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C76.01
kidney, neonate N00.CNhs11214.646-21G75.54
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I121.85
kidney, neonate N25.CNhs11122.1353-25F318.68
kidney, neonate N30.CNhs11203.1385-42H126.16
liver, adult pregnant day01.CNhs10466.508-5B228.16
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H115.97
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E413.09
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B428.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.90
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B419.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:24923222..24923277,-&oldid=753044"