Personal tools

FFCP PHASE1:Mm9::chr13:5860872..5860883,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:5860872..5860883,+
|short_description=p3@Klf6
|description=CAGE_peak_3_at_Klf6_5end
|association_with_transcript=137bp_to_ENSMUST00000000080,NM_011803,uc007pjw.1_5end
|EntrezGene=23849
|EntrezGene=23849
|HGNC=
|HGNC=
|UniProt=Q8BPQ2
|UniProt=Q8BPQ2
|association_with_transcript=137bp_to_ENSMUST00000000080,NM_011803,uc007pjw.1_5end
|description=CAGE_peak_3_at_Klf6_5end
|id=chr13:5860872..5860883,+
|ontology_enrichment_disease=
|phase1_expression=1.76163731815273,3.83872948403297,5.91499011206397,2.72217790176147,2.50447864973174,3.18970616632591,5.84031601488814,3.61545305636414,4.22366166455,4.21316147379588,1.88339765048055,0.797721589953364,3.93761678841773,2.09808965805594,0.333109761815663,0.607425802169478,0,3.78554598429885,5.07323404341233,5.09267582157636,1.19060606211498,0.397163804803541,0.783599367416806,3.19984845586813,3.21172993494038,4.01962374880514,4.73838195774982,3.23206849028834,3.6104449696711,1.51218077855958,4.43461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,28.0416192593728,21.8773896466664,28.2702821745851,27.0586484494267,30.0540013381716,24.2755176515577,4.28049181116963,3.24406179902447,3.85448179539531,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.699932108126813,0,18.7916518784665,8.70434570413613,10.4189077734164,9.00408026125814,4.87106847895886,7.73508138416164,0.202316460859598,0.528990979272033,0.633831403506179,2.71075625655306,0.889294796111139,1.7997994345628,1.97773272513395,2.1314403448383,1.19840044207362,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0.921639199537461,0.659431438650969,1.64677758484337,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,0.996601765593721,0.559198337475902,17.9471078199646,9.74873125377533,9.27566363845369,2.58127163094416,7.47968467078526,0.539703191637817,0.649776417447669,0,0.842666520790511,2.55645483867087,1.81850203222008,0.70667914902068,2.53518155598025,5.13305909657271,0,0,8.44315059943735,9.12095515710355,9.60496445528088,2.05530983494308,4.14300613835475,1.33597925158342,0.867426633830679,0.608930956624282,0.922461989024234,1.05505848386836,1.29347577849275,0.251333182659351,9.64060374164058,3.61498392299779,1.76922110389975,1.13236794963186,1.10420759230197,0.969750506270444,13.0474232852686,0,0.41889341362691,1.02182822083437,15.9354115592874,16.7972764678154,13.3423738426718,0.149790639404823,0.457500602818626,0.628271760564322,2.08589184230732,1.53429274398198,0.83115217823824,0.811206315338788,2.34230536855727,1.61729061793121,1.51633655060205,0.841767423545896,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,0.884474488967262,0.896796041993948,0.655912071918102,1.29351685369508,0.215567992932842,0.189106080167819,0.703804496655795,0.657587197282725,0.834141747676794,1.39300866608867,1.64625709126355,0.59710280045548,6.31991868581911,15.4408744268829,13.6398479709884,0.414251545071004,1.17263029990548,0.36012412292203,1.65721314909647,2.36117078096885,1.54267112887378,1.62773761325285,1.07309360559848,2.33530684734339,0.987359099480883,0.656669856316381,0.324275238183423,0.438599962275997,0.878200461164203,1.47627060636409,0.841159794256509,0.514523061896422,2.64335026387038,0.264450566663544,0.639864751605702,0.464473343720877,0.77320476793256,0.201683524623343,0.444756087689741,0.570676878337677,1.42358718463353,1.4822905925161,1.50801125280162,0.994782360205754,1.16978452271472,1.79763881730844,2.16138049874694,4.77939055810481,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.771494018793504,0.379419222745544,0.442830443938806,0.784993639206874,0.246794327843601,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,1.13494658742525,1.37280706594041,2.87536413054709,0.744281895337007,0.624075346229121,1.76805214562978,0.358794827043824,1.4473305640901,5.35784251483154,0.568474235311454,0.977789858652155,1.18821560042632,0.469380496577004,0.335012514883631,1.19021820443007,4.87834119644497,1.89162172927429,3.10050565508285,1.91345722388985,2.29408640602033,3.28101465545202,3.32692834737477,21.1107797514981,7.07077388964322,0.491764273019036,1.37968373152366,0.481651769963376,0.35163505977661,1.96721934452011,1.51482556322624,1.26203287766503,1.95219372148319,0.646270193198397,0.716906393857656,0.891194696329576,0.849229592366497,0,1.75353514746787,0.790575555893047,0.642642632843614,1.84522110770749,0.534196811001766,2.11753047159649,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.295301892880773,1.22974059177571,2.32585463851399,2.18120237686503,0.712994756769443,0.316036757935816,0,2.06271086496374,1.02131881726136,0.900305470156551,0.388076051348264,0.643011105094777,0.177340233642274,1.24858172321449,0.493647061806363,0.608929898229199,5.39744928546534,5.08396970073168,1.7642271844397,4.61681508236144,3.39075296061402,3.25689794612042,3.10368094408155,4.43180429311665,2.33184669303881,0.556275906031529,1.70870880797853,0.82554747185289,1.11116716421827,0.565105371014073,0.820165366326151,1.14389086603261,15.298058699447,27.7103875600843,17.4131966993574,2.86401185404534,0.158167996790568,1.82987520414164,1.29606408986162,1.67270636811575,1.74690050996942,1.88810084938749,2.31429676030941,2.87931536182433,7.2584385043404,1.24267862617385,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,1.05621514781179,1.0416350787516,1.8874681996628,1.20792060413003,0.576060012515731,0.632022241256357,0,0.308132871494482,0,0.895133478337407,0.39736270956253,0.600977247599844,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.682205165178267,0.192423683280659,0.701261413089414,1.58711268530648,0.665957860122194,0.807424709485281,1.51096154727671,1.73870634628971,1.87682475451182,0.36630324853453,0.428736758158132,2.00628841614145,2.82375921308533,2.76195141904306,1.71868654031819,2.92150409984269,0.685082519770642,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,2.07104124700728,0.31136204275253,0,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,1.08842759088278,0.689225627467359,1.42888107384922,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,0,0.949080144993393,0.788035859004508,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,1.87145286756327,2.36358159453128,2.67803664896381,1.32354851471709,1.62307484934295
|phase1_expression=1.76163731815273,3.83872948403297,5.91499011206397,2.72217790176147,2.50447864973174,3.18970616632591,5.84031601488814,3.61545305636414,4.22366166455,4.21316147379588,1.88339765048055,0.797721589953364,3.93761678841773,2.09808965805594,0.333109761815663,0.607425802169478,0,3.78554598429885,5.07323404341233,5.09267582157636,1.19060606211498,0.397163804803541,0.783599367416806,3.19984845586813,3.21172993494038,4.01962374880514,4.73838195774982,3.23206849028834,3.6104449696711,1.51218077855958,4.43461021310609,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,28.0416192593728,21.8773896466664,28.2702821745851,27.0586484494267,30.0540013381716,24.2755176515577,4.28049181116963,3.24406179902447,3.85448179539531,0.782391344348039,0.218025156380447,0.659058548203415,0.388859798148567,0.699932108126813,0,18.7916518784665,8.70434570413613,10.4189077734164,9.00408026125814,4.87106847895886,7.73508138416164,0.202316460859598,0.528990979272033,0.633831403506179,2.71075625655306,0.889294796111139,1.7997994345628,1.97773272513395,2.1314403448383,1.19840044207362,0,0,0.135005938331691,0.210324961351382,0.285650984403804,0.662605622854841,0.244981598429908,0.0958454710182364,0.919218786610021,1.10115880999389,0.510749352340751,0.921639199537461,0.659431438650969,1.64677758484337,0.52091337055676,0.279182999001381,0,0.61119299110724,1.76777151284201,0.996601765593721,0.559198337475902,17.9471078199646,9.74873125377533,9.27566363845369,2.58127163094416,7.47968467078526,0.539703191637817,0.649776417447669,0,0.842666520790511,2.55645483867087,1.81850203222008,0.70667914902068,2.53518155598025,5.13305909657271,0,0,8.44315059943735,9.12095515710355,9.60496445528088,2.05530983494308,4.14300613835475,1.33597925158342,0.867426633830679,0.608930956624282,0.922461989024234,1.05505848386836,1.29347577849275,0.251333182659351,9.64060374164058,3.61498392299779,1.76922110389975,1.13236794963186,1.10420759230197,0.969750506270444,13.0474232852686,0,0.41889341362691,1.02182822083437,15.9354115592874,16.7972764678154,13.3423738426718,0.149790639404823,0.457500602818626,0.628271760564322,2.08589184230732,1.53429274398198,0.83115217823824,0.811206315338788,2.34230536855727,1.61729061793121,1.51633655060205,0.841767423545896,0.130120442962704,0.229902104433473,0.900310649026746,0.753524089178575,0.884474488967262,0.896796041993948,0.655912071918102,1.29351685369508,0.215567992932842,0.189106080167819,0.703804496655795,0.657587197282725,0.834141747676794,1.39300866608867,1.64625709126355,0.59710280045548,6.31991868581911,15.4408744268829,13.6398479709884,0.414251545071004,1.17263029990548,0.36012412292203,1.65721314909647,2.36117078096885,1.54267112887378,1.62773761325285,1.07309360559848,2.33530684734339,0.987359099480883,0.656669856316381,0.324275238183423,0.438599962275997,0.878200461164203,1.47627060636409,0.841159794256509,0.514523061896422,2.64335026387038,0.264450566663544,0.639864751605702,0.464473343720877,0.77320476793256,0.201683524623343,0.444756087689741,0.570676878337677,1.42358718463353,1.4822905925161,1.50801125280162,0.994782360205754,1.16978452271472,1.79763881730844,2.16138049874694,4.77939055810481,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.771494018793504,0.379419222745544,0.442830443938806,0.784993639206874,0.246794327843601,0,0.166845105716094,0.589676985339609,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,0.863088412352432,1.13494658742525,1.37280706594041,2.87536413054709,0.744281895337007,0.624075346229121,1.76805214562978,0.358794827043824,1.4473305640901,5.35784251483154,0.568474235311454,0.977789858652155,1.18821560042632,0.469380496577004,0.335012514883631,1.19021820443007,4.87834119644497,1.89162172927429,3.10050565508285,1.91345722388985,2.29408640602033,3.28101465545202,3.32692834737477,21.1107797514981,7.07077388964322,0.491764273019036,1.37968373152366,0.481651769963376,0.35163505977661,1.96721934452011,1.51482556322624,1.26203287766503,1.95219372148319,0.646270193198397,0.716906393857656,0.891194696329576,0.849229592366497,0,1.75353514746787,0.790575555893047,0.642642632843614,1.84522110770749,0.534196811001766,2.11753047159649,0.989820737835213,0,0.242780636154981,0,0.188605079755898,0.295301892880773,1.22974059177571,2.32585463851399,2.18120237686503,0.712994756769443,0.316036757935816,0,2.06271086496374,1.02131881726136,0.900305470156551,0.388076051348264,0.643011105094777,0.177340233642274,1.24858172321449,0.493647061806363,0.608929898229199,5.39744928546534,5.08396970073168,1.7642271844397,4.61681508236144,3.39075296061402,3.25689794612042,3.10368094408155,4.43180429311665,2.33184669303881,0.556275906031529,1.70870880797853,0.82554747185289,1.11116716421827,0.565105371014073,0.820165366326151,1.14389086603261,15.298058699447,27.7103875600843,17.4131966993574,2.86401185404534,0.158167996790568,1.82987520414164,1.29606408986162,1.67270636811575,1.74690050996942,1.88810084938749,2.31429676030941,2.87931536182433,7.2584385043404,1.24267862617385,0.56369293868419,0.299033092087958,0.165458490457098,0.194451188344048,0.258319646955462,0.675824501963113,1.05621514781179,1.0416350787516,1.8874681996628,1.20792060413003,0.576060012515731,0.632022241256357,0,0.308132871494482,0,0.895133478337407,0.39736270956253,0.600977247599844,0.443068581523732,0.403865799792591,0.609654453239999,0.201652370273681,0.682205165178267,0.192423683280659,0.701261413089414,1.58711268530648,0.665957860122194,0.807424709485281,1.51096154727671,1.73870634628971,1.87682475451182,0.36630324853453,0.428736758158132,2.00628841614145,2.82375921308533,2.76195141904306,1.71868654031819,2.92150409984269,0.685082519770642,1.5107877947794,2.70009000092722,1.80128481289688,1.81256963593682,2.07104124700728,0.31136204275253,0,0.512200817262403,0.486213434136588,0.628839487883947,0.551530525350042,0.888986911206461,0.618105171716683,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.187283014939765,1.08842759088278,0.689225627467359,1.42888107384922,0.811190281613988,0.38581844092741,0,0.147198920134397,0,0.532427418478012,0.238436189947321,0.872078499793971,0.658765662907314,0.761531471025089,0.73171189149109,0.789209134313529,0.543216455383447,0,0.949080144993393,0.788035859004508,0.409231043169689,0.464810523557898,0.578719832943424,0.749431733813838,1.87145286756327,2.36358159453128,2.67803664896381,1.32354851471709,1.62307484934295
|short_description=p3@Klf6
}}
}}

Revision as of 20:16, 17 April 2012

Short description:p3@Klf6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Klf6_5end
Coexpression cluster:NA
Association with transcript: 137bp_to_ENSMUST00000000080, NM_011803, uc007pjw.1_5end
EntrezGene:Klf6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Klf6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.79
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D917.95
Mouse Schwann, donor2.CNhs12573.11746-123F99.75
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.12
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.34
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.44
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.64
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.07
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G35.08
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I53.10
skin, neonate N10.CNhs11108.762-6C44.43
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.41
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:5860872..5860883,%2B&oldid=757431"