Personal tools

FFCP PHASE1:Mm9::chr16:35939058..35939158,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:35939058..35939158,+
|short_description=p1@Parp9
|description=CAGE_peak_1_at_Parp9_5end
|association_with_transcript=0bp_to_ENSMUST00000023622,ENSMUST00000114877,ENSMUST00000122870,ENSMUST00000128878_5end
|EntrezGene=80285
|EntrezGene=80285
|HGNC=
|HGNC=
|UniProt=Q8CAS9,E0CYZ7
|UniProt=Q8CAS9,E0CYZ7
|association_with_transcript=0bp_to_ENSMUST00000023622,ENSMUST00000114877,ENSMUST00000122870,ENSMUST00000128878_5end
|description=CAGE_peak_1_at_Parp9_5end
|id=chr16:35939058..35939158,+
|ontology_enrichment_disease=
|phase1_expression=2.08193501236232,64.5604504132818,56.874904923692,78.6406949397758,71.6280893823276,18.6345991822198,32.4721570427781,49.1959862312406,7.88416844049334,10.2988391581677,3.76679530096111,1.91453181588807,64.5426751840646,56.7358411699293,36.6420737997229,45.354459895321,44.0723983220732,61.041928996819,51.1436837349406,47.1072513495814,12.5013636522073,27.4043025314443,33.9559725880616,51.3575677166835,55.5170460182551,45.9385571292016,45.2300095967028,46.1108437947803,82.0901172051535,61.2433215316632,44.5678326417162,1.27006134691926,1.84519436275371,15.8481681015439,12.4206196493048,15.1273527276228,14.0876855821035,48.5496691654813,33.5974198145234,45.0230419817467,38.8232782100469,41.6657745824652,39.8118489485546,16.7442767907518,14.192770370732,10.6457116253775,7.04152209913235,4.36050312760893,3.29529274101708,7.38833616482277,12.4587915246573,1.43752564364972,35.9054776963556,39.8949178106239,38.6507869013834,16.2073444702647,16.3324060765091,23.7209162447623,0,0,0,3.04960078862219,8.00365316500025,9.89889689009539,24.7216590641744,5.6838409195688,5.09320187881288,3.45796474789399,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,1.54607978666129,0,0.479227355091182,0,0,2.17068474744819,2.61131106535614,0.395658863190582,0.274462930807229,0.52091337055676,2.51264699101243,3.93933827022176,2.75036845998258,1.47314292736834,2.13557521198654,0.931997229126503,23.5508461266202,31.0599112038888,93.0465008732386,49.9045848649204,11.5595126730318,31.3027851149934,51.3323369783659,43.9066349355389,32.1617722101712,10.0553890321054,12.9893002301434,6.00677276667578,1.97180787687353,3.84979432242953,0,14.2213340630666,7.36069539438128,8.61423542615335,3.53867111510348,34.9402671940324,81.0475575815647,20.9303416081403,2.4287945747259,2.74018930480927,3.68984795609694,14.1679282119465,15.8744754633201,13.4463252722753,43.2591193535154,34.7038456607788,17.6922110389975,7.27950824763341,14.575540218386,19.8798853785441,33.550517019262,4.39171195517321,1.8850203613211,81.2353435563321,9.82484020948546,10.7982491578813,13.2153036155987,2.24685959107234,3.20250421973039,1.13088916901578,2.08589184230732,3.06858548796397,2.49345653471472,1.62241263067758,11.1004906596845,19.5318943857846,12.3834151632501,10.9429765060966,1.04096354370163,1.60931473103431,1.62055916824814,2.10986744970001,4.69451844144162,3.58718416797579,3.37326208415024,8.2785078636485,0.431135985865684,0.567318240503458,1.05570674498369,2.6303487891309,2.50242524303038,4.179025998266,7.20237477427802,0.995171334092466,6.31991868581911,11.5806558201622,12.7873574728017,0.828503090142008,2.11073453982987,2.34080679899319,3.78791576936336,6.88674811115913,4.01094493507183,6.51095045301142,9.12129564758705,13.5447797145917,6.41783414662574,11.984224877774,13.3763535750662,13.4503988431306,25.4678133737619,20.936201326618,3.15434922846191,3.19004298375782,131.176256844568,62.67478429926,1.06644125267617,3.71578674976702,7.34544529535932,10.4875432804138,17.7902435075896,35.1917408308234,55.0453711391634,50.0684822360993,43.2296559136464,52.723465090905,43.6719555146829,81.7925661875342,75.4321794062683,59.9415232495645,1.32767530667157,1.94222471436539,1.1270773567308,4.2766778847516,10.0855293327165,7.29412526859313,8.41045943752622,11.0707610984702,13.0308944108341,11.9695249004147,59.8834306716041,5.33904338291501,7.66580080941492,10.3436571697033,9.53442570525964,13.0235666266305,12.4766667372896,42.2913322052692,33.5619919424323,36.5166679540148,51.7565543498476,46.5176184585629,40.5648975048929,51.2735122232637,45.9257378616095,32.3237159313456,48.9595953941502,1.51593129416388,2.28150967018836,2.37643120085263,5.39787571063555,9.04533790185805,24.9945822930314,20.6841666729267,16.3940549870439,25.6899039992579,13.5536553358864,29.1676700194014,34.709681355045,30.810249477862,120.633027151418,169.154667667619,26.0635064700089,33.6642830491774,5.29816946959713,3.16471553798949,4.09837363441689,11.1087207969924,5.99465616890888,5.46614242015294,10.7711698866399,10.0366895140072,9.35754431146055,8.49229592366497,10.1202675418724,9.35218745316198,7.51046778098395,4.17717711348349,17.8844507362418,6.05423052468668,8.95878276444668,26.5601897985782,7.96470830039777,5.58395463156457,4.83717691143602,8.11001842950362,5.90603785761546,12.912276213645,24.8091161441492,16.7225515559653,12.83390562185,9.7971394960103,6.32511651449993,8.25084345985495,17.3624198934432,1.08036656418786,2.45781499187234,3.42939256050548,3.90148514013002,2.31879462882692,3.45552943264454,9.74287837166718,25.8138878870081,23.3015277950202,14.1138174755176,7.74965388824956,14.5317984026315,7.11692514152239,6.2073618881631,4.92422699235184,56.2558014695612,4.45020724825223,38.6168190603147,5.57244543500701,44.6318810961005,30.5156900347599,34.5836396134194,40.9512930039675,20.0574547392749,24.7714070612875,23.2175955991432,17.184071124272,1.10717597753397,4.87966721104437,5.07625101862466,5.43629569637619,13.538478952263,10.6542833644008,17.8531464366726,9.6849698534091,37.9771871744953,19.2615187056947,1.12738587736838,1.64468200648377,0.827292452285488,2.52786544847262,2.58319646955462,6.08242051766801,7.62822051197401,5.07797100891405,3.77493639932559,2.65742532908607,4.32045009386798,48.3497014561113,15.0016659314722,23.9316530194047,34.0392556201823,26.1378975674523,27.020664250252,25.9622170963133,31.4578692881849,33.4198949328369,27.6630708157649,30.2478555410522,35.8645001122289,30.4991537999844,38.4525008177362,15.8711268530648,11.0992976687032,2.69141569828427,2.01461539636894,26.6601639764423,31.3429734003474,53.4802742860414,25.0811003522507,41.1289125308998,2.82375921308533,1.38097570952153,2.29158205375759,1.71853182343688,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,1.81256963593682,2.07104124700728,0.62272408550506,1.59609949360412,0.853668028770671,2.18796045361465,5.44994222832754,4.22840069435032,4.66718128383392,9.47761263298913,4.81378814387723,3.79045817645696,8.11133759648767,5.65879024158229,6.27398100048212,6.14641463086745,5.05432126809397,10.0021675169445,5.2147946675185,7.13764115715709,7.82963211526283,8.24313952752625,8.22886205724997,6.56660482789549,5.48403236878838,8.57543858130738,7.90518795488777,6.93839784711747,6.40247905054704,7.89209134313529,9.64209208305619,7.85599180320834,4.86403574309114,5.1222330835293,7.36615877705441,6.66228417099654,4.05103883060397,2.24829520144151,14.0358965067245,13.9666185131394,8.99055160723564,11.4707537942148,16.6944841646703
|phase1_expression=2.08193501236232,64.5604504132818,56.874904923692,78.6406949397758,71.6280893823276,18.6345991822198,32.4721570427781,49.1959862312406,7.88416844049334,10.2988391581677,3.76679530096111,1.91453181588807,64.5426751840646,56.7358411699293,36.6420737997229,45.354459895321,44.0723983220732,61.041928996819,51.1436837349406,47.1072513495814,12.5013636522073,27.4043025314443,33.9559725880616,51.3575677166835,55.5170460182551,45.9385571292016,45.2300095967028,46.1108437947803,82.0901172051535,61.2433215316632,44.5678326417162,1.27006134691926,1.84519436275371,15.8481681015439,12.4206196493048,15.1273527276228,14.0876855821035,48.5496691654813,33.5974198145234,45.0230419817467,38.8232782100469,41.6657745824652,39.8118489485546,16.7442767907518,14.192770370732,10.6457116253775,7.04152209913235,4.36050312760893,3.29529274101708,7.38833616482277,12.4587915246573,1.43752564364972,35.9054776963556,39.8949178106239,38.6507869013834,16.2073444702647,16.3324060765091,23.7209162447623,0,0,0,3.04960078862219,8.00365316500025,9.89889689009539,24.7216590641744,5.6838409195688,5.09320187881288,3.45796474789399,0.311068836925433,0.405017814995072,0.420649922702764,0.856952953211411,1.54607978666129,0,0.479227355091182,0,0,2.17068474744819,2.61131106535614,0.395658863190582,0.274462930807229,0.52091337055676,2.51264699101243,3.93933827022176,2.75036845998258,1.47314292736834,2.13557521198654,0.931997229126503,23.5508461266202,31.0599112038888,93.0465008732386,49.9045848649204,11.5595126730318,31.3027851149934,51.3323369783659,43.9066349355389,32.1617722101712,10.0553890321054,12.9893002301434,6.00677276667578,1.97180787687353,3.84979432242953,0,14.2213340630666,7.36069539438128,8.61423542615335,3.53867111510348,34.9402671940324,81.0475575815647,20.9303416081403,2.4287945747259,2.74018930480927,3.68984795609694,14.1679282119465,15.8744754633201,13.4463252722753,43.2591193535154,34.7038456607788,17.6922110389975,7.27950824763341,14.575540218386,19.8798853785441,33.550517019262,4.39171195517321,1.8850203613211,81.2353435563321,9.82484020948546,10.7982491578813,13.2153036155987,2.24685959107234,3.20250421973039,1.13088916901578,2.08589184230732,3.06858548796397,2.49345653471472,1.62241263067758,11.1004906596845,19.5318943857846,12.3834151632501,10.9429765060966,1.04096354370163,1.60931473103431,1.62055916824814,2.10986744970001,4.69451844144162,3.58718416797579,3.37326208415024,8.2785078636485,0.431135985865684,0.567318240503458,1.05570674498369,2.6303487891309,2.50242524303038,4.179025998266,7.20237477427802,0.995171334092466,6.31991868581911,11.5806558201622,12.7873574728017,0.828503090142008,2.11073453982987,2.34080679899319,3.78791576936336,6.88674811115913,4.01094493507183,6.51095045301142,9.12129564758705,13.5447797145917,6.41783414662574,11.984224877774,13.3763535750662,13.4503988431306,25.4678133737619,20.936201326618,3.15434922846191,3.19004298375782,131.176256844568,62.67478429926,1.06644125267617,3.71578674976702,7.34544529535932,10.4875432804138,17.7902435075896,35.1917408308234,55.0453711391634,50.0684822360993,43.2296559136464,52.723465090905,43.6719555146829,81.7925661875342,75.4321794062683,59.9415232495645,1.32767530667157,1.94222471436539,1.1270773567308,4.2766778847516,10.0855293327165,7.29412526859313,8.41045943752622,11.0707610984702,13.0308944108341,11.9695249004147,59.8834306716041,5.33904338291501,7.66580080941492,10.3436571697033,9.53442570525964,13.0235666266305,12.4766667372896,42.2913322052692,33.5619919424323,36.5166679540148,51.7565543498476,46.5176184585629,40.5648975048929,51.2735122232637,45.9257378616095,32.3237159313456,48.9595953941502,1.51593129416388,2.28150967018836,2.37643120085263,5.39787571063555,9.04533790185805,24.9945822930314,20.6841666729267,16.3940549870439,25.6899039992579,13.5536553358864,29.1676700194014,34.709681355045,30.810249477862,120.633027151418,169.154667667619,26.0635064700089,33.6642830491774,5.29816946959713,3.16471553798949,4.09837363441689,11.1087207969924,5.99465616890888,5.46614242015294,10.7711698866399,10.0366895140072,9.35754431146055,8.49229592366497,10.1202675418724,9.35218745316198,7.51046778098395,4.17717711348349,17.8844507362418,6.05423052468668,8.95878276444668,26.5601897985782,7.96470830039777,5.58395463156457,4.83717691143602,8.11001842950362,5.90603785761546,12.912276213645,24.8091161441492,16.7225515559653,12.83390562185,9.7971394960103,6.32511651449993,8.25084345985495,17.3624198934432,1.08036656418786,2.45781499187234,3.42939256050548,3.90148514013002,2.31879462882692,3.45552943264454,9.74287837166718,25.8138878870081,23.3015277950202,14.1138174755176,7.74965388824956,14.5317984026315,7.11692514152239,6.2073618881631,4.92422699235184,56.2558014695612,4.45020724825223,38.6168190603147,5.57244543500701,44.6318810961005,30.5156900347599,34.5836396134194,40.9512930039675,20.0574547392749,24.7714070612875,23.2175955991432,17.184071124272,1.10717597753397,4.87966721104437,5.07625101862466,5.43629569637619,13.538478952263,10.6542833644008,17.8531464366726,9.6849698534091,37.9771871744953,19.2615187056947,1.12738587736838,1.64468200648377,0.827292452285488,2.52786544847262,2.58319646955462,6.08242051766801,7.62822051197401,5.07797100891405,3.77493639932559,2.65742532908607,4.32045009386798,48.3497014561113,15.0016659314722,23.9316530194047,34.0392556201823,26.1378975674523,27.020664250252,25.9622170963133,31.4578692881849,33.4198949328369,27.6630708157649,30.2478555410522,35.8645001122289,30.4991537999844,38.4525008177362,15.8711268530648,11.0992976687032,2.69141569828427,2.01461539636894,26.6601639764423,31.3429734003474,53.4802742860414,25.0811003522507,41.1289125308998,2.82375921308533,1.38097570952153,2.29158205375759,1.71853182343688,2.74033007908257,1.5107877947794,0.675022500231806,1.35096360967266,1.81256963593682,2.07104124700728,0.62272408550506,1.59609949360412,0.853668028770671,2.18796045361465,5.44994222832754,4.22840069435032,4.66718128383392,9.47761263298913,4.81378814387723,3.79045817645696,8.11133759648767,5.65879024158229,6.27398100048212,6.14641463086745,5.05432126809397,10.0021675169445,5.2147946675185,7.13764115715709,7.82963211526283,8.24313952752625,8.22886205724997,6.56660482789549,5.48403236878838,8.57543858130738,7.90518795488777,6.93839784711747,6.40247905054704,7.89209134313529,9.64209208305619,7.85599180320834,4.86403574309114,5.1222330835293,7.36615877705441,6.66228417099654,4.05103883060397,2.24829520144151,14.0358965067245,13.9666185131394,8.99055160723564,11.4707537942148,16.6944841646703
|short_description=p1@Parp9
}}
}}

Revision as of 00:29, 18 April 2012

Short description:p1@Parp9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Parp9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000023622, ENSMUST00000114877, ENSMUST00000122870, ENSMUST00000128878_5end
EntrezGene:Parp9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Parp9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I564.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I656.87
CD326+ enterocyte, pool1.CNhs13542.11848-124I378.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I471.63
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.63
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E949.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E856.74
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A136.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A345.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.07
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A261.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A451.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A647.11
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D151.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D255.52
GP2+ M cell, pool1.CNhs13228.11845-124H945.94
GP2+ M cell, pool2.CNhs13231.11846-124I145.23
GP2+ M cell, pool3.CNhs13240.11847-124I246.11
Ileum epithelium, pool1.CNhs13199.10252-104B982.09
Ileum epithelium, pool2.CNhs13232.10253-104C161.24
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C844.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G848.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H133.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H345.02
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G938.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H241.67
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H439.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.89
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A138.65
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.21
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.33
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.72
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D923.55
Mouse Schwann, donor2.CNhs12573.11746-123F931.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.05
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F749.90
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C831.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.33
Mouse hepatocyte, donor8.CNhs13091.11824-124F643.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A732.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.94
accessory axillary lymph node, adult.CNhs10475.1063-29H981.05
adrenal gland, adult.CNhs10508.49-24D720.93
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F514.17
adrenal gland, neonate N00.CNhs11191.1311-23C115.87
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A843.26
aorta, adult.CNhs10498.46-23H134.70
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C319.88
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H781.24
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.22
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.53
epididymis, adult.CNhs10490.58-23B212.38
eyeball, adult.CNhs10484.31-12G410.94
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C64.69
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G39.12
heart, neonate N00.CNhs11213.639-21E313.54
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G111.98
heart, neonate N16.CNhs11209.782-15G113.38
heart, neonate N20.CNhs11127.821-26I613.45
heart, neonate N25.CNhs11196.1351-25D325.47
heart, neonate N30.CNhs11202.1390-42D220.94
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I3131.18
intestine, adult.CNhs10496.178-9A362.67
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D317.79
intestine, embryo E18.CNhs10526.1289-20F735.19
intestine, neonate N00.CNhs11126.644-26D155.05
intestine, neonate N01.CNhs11192.1322-23E950.07
intestine, neonate N06.CNhs11102.688-20B843.23
intestine, neonate N07.CNhs11095.720-20F252.72
intestine, neonate N10.CNhs11098.755-23A543.67
intestine, neonate N20.CNhs11187.827-18D181.79
intestine, neonate N25.CNhs11121.1352-25E375.43
intestine, neonate N30.CNhs11131.1384-42G159.94
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C710.09
kidney, neonate N00.CNhs11214.646-21G77.29
kidney, neonate N10.CNhs11206.758-6D58.41
kidney, neonate N20.CNhs11113.832-19I111.07
kidney, neonate N25.CNhs11122.1353-25F313.03
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B259.88
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H67.67
liver, embryo E14.CNhs10594.409-16E110.34
liver, embryo E15.CNhs10520.433-16D79.53
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G442.29
liver, neonate N00.CNhs11117.641-24F433.56
liver, neonate N03.CNhs11123.1345-25G236.52
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H246.52
liver, neonate N10.CNhs11115.751-24B940.56
liver, neonate N20.CNhs11220.823-25A351.27
liver, neonate N25.CNhs11198.1368-26H145.93
liver, neonate N30.CNhs11106.1382-42D132.32
lung, adult.CNhs10474.28-22B148.96
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A69.05
lung, embryo E18.CNhs10583.1287-20I624.99
lung, neonate N00.CNhs11224.640-42C620.68
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A325.69
lung, neonate N10.CNhs11219.750-23E613.55
lung, neonate N20.CNhs11109.822-18A429.17
lung, neonate N25.CNhs11119.1359-25C734.71
lung, neonate N30.CNhs11133.1394-42H230.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1120.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1169.15
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H233.66
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I717.88
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G626.56
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.58
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G924.81
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G817.36
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I725.81
placenta, adult pregnant day17.CNhs10464.577-18G323.30
prostate, adult.CNhs10470.859-1F814.11
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G414.53
skin, neonate N03.CNhs11215.662-22H37.12
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I156.26
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G238.62
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F244.63
spleen, neonate N10.CNhs11116.752-24D130.52
spleen, neonate N20.CNhs11112.824-19H134.58
spleen, neonate N25.CNhs11099.1354-25G340.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C924.77
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.22
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G84.88
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C613.54
stomach, neonate N03.CNhs11193.1340-24B810.65
stomach, neonate N07.CNhs11210.718-18A917.85
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I137.98
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B548.35
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I223.93
thymus, embryo E16.CNhs11002.456-26C534.04
thymus, embryo E17.CNhs10581.478-18C126.14
thymus, embryo E18.CNhs10595.1273-19G427.02
thymus, neonate N02.CNhs11181.1541-43F825.96
thymus, neonate N03.CNhs11137.2104-43C731.46
thymus, neonate N06.CNhs11197.681-26C433.42
thymus, neonate N07.CNhs11211.713-19D327.66
thymus, neonate N10.CNhs11194.748-24E430.25
thymus, neonate N20.CNhs11186.820-7A235.86
thymus, neonate N25.CNhs11125.1362-25G730.50
thymus, neonate N30.CNhs11132.1393-42G238.45
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E426.66
uterus, adult pregnant day19.CNhs10497.590-15F531.34
uterus, adult.CNhs10509.92-27E553.48
vagina, adult.CNhs10502.89-27D525.08
vesicular gland, adult.CNhs10491.51-27F841.13
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B314.04
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D111.47
whole body, neonate N10.CNhs10518.761-6B416.69





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:35939058..35939158,%2B&oldid=789710"