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FFCP PHASE1:Mm9::chr12:73509728..73509746,-: Difference between revisions

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|description=CAGE_peak_4_at_Rtn1_5end
|description=CAGE_peak_4_at_Rtn1_5end
|id=chr12:73509728..73509746,-
|id=chr12:73509728..73509746,-
|ontology_enrichment_celltype=CL:0000221!1.53e-15!44;CL:0000133!1.53e-15!44;CL:0002319!2.98e-15!43;CL:0000055!7.31e-13!50;CL:0000117!9.09e-13!23;CL:0000337!9.09e-13!23;CL:0000540!1.23e-12!33;CL:0000047!1.23e-12!33;CL:0000031!1.23e-12!33;CL:0000404!1.23e-12!33;CL:0000393!6.24e-11!39;CL:0000211!6.24e-11!39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,5.27246838562732,4.27745777963423,1.25987779462826,4.31257693094915,0,0,0,1.54355661621568,2.29226751951005,2.06268836910977,11.5320382689971,13.7537654610729,6.97214543856797,1.0165335962074,0,0,0,0,5.69240209984969,8.4528027170742,1.76272340924412,2.56511282830212,2.10324961351382,13.139945282575,12.589506834242,3.1847607795888,3.06705507258356,3.67687514644008,13.2139057199266,15.5778552463929,18.4327839907492,12.3973110466382,12.9912453915422,7.29278718779464,15.0758819460746,12.9435400307286,17.1134037510027,15.3206864446307,13.5253096759148,10.6247684120421,0.227178579999552,1.20914496170857,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.890652834388949,1.04091196059682,1.21786191324856,1.15307748628029,1.20578112442098,0.823120949949934,0.502666365318702,0,0.433798070759735,0,0,0,0,0,14.0534782565543,12.7762491156208,0,0,0,0,23.2175491077475,32.0250421973039,12.4397808591736,26.7689453096106,20.4572365864264,14.5451631191692,19.4689515681309,0.203678727700633,0,0.252722758433675,2.10441855886474,0.130120442962704,0.919608417733892,1.80062129805349,1.65775299619287,2.58538696775046,2.562274405697,4.12287588062807,7.76110112217047,0.215567992932842,0,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0.817357396570186,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0.219550115291051,0,26.2862435705159,8.33527360272204,0,0,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0.608580364165509,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0.739012760666419,0.757965647081939,1.14075483509418,0.339490171550376,0.469380496577004,0.670025029767263,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,1.75400245523236,0.491589944147214,0.345369963731791,0.578596234326046,0,0,1.47529281905711,0.551873492609465,15.2523060488402,10.7834751664827,0,0.252470927204373,1.26203287766503,0.780877488593277,2.36965737506079,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.75353514746787,2.37172666767914,12.2102100240287,1.56134093729095,0.178065603667255,0.651547837414304,1.64970122972535,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,1.03135543248187,5.44703369206061,0.540183282093931,0.646793418913773,1.07168517515796,0.886701168211368,1.24858172321449,1.97458824722545,2.74018454203139,0.704015124191131,2.1183207086382,0,0.32977250588296,0,0,0,0,0.291480836629851,15.9465759729038,0.170870880797853,0,0.185194527369712,0,0.546776910884101,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,0.655087691238533,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0.724752362478018,0.576060012515731,0,0.810900861160657,0.308132871494482,0,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.680191150845634,0.665957860122194,0.717710852875806,0.167884616364078,0.386379188064381,0.563047426353546,0.183151624267265,0,0,15.2482997506608,15.1907328047368,18.9055519435001,16.497905504994,13.0165678756422,26.4387864086395,17.550585006027,20.2644541450899,23.5634052671786,26.9235362110946,0.207574695168353,0.798049746802062,1.19513524027894,1.45864030240976,2.72497111416377,2.38996560985018,2.22246727801615,2.06035057238894,2.24643446714271,0.505394423527595,1.77435509923168,2.07488975524684,1.77918864192777,1.98477972455095,2.23998328926892,1.42888107384922,2.0859178670074,1.35036454324594,0.824171801606613,1.76638704161277,3.42869252385415,1.4198064492747,2.38436189947321,2.32554266611726,1.50575008664529,1.86152137361688,1.09756783723664,1.57841826862706,1.22223702461276,1.12228454331548,0.949080144993393,1.0835493061312,2.04615521584845,2.47898945897546,1.92906610981141,6.74488560432454,2.10538447600868,1.71896843238639,1.53030665655075,1.32354851471709,0.927471342481686
|phase1_expression=1.44133962394315,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,4.67738095830884,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,3.92445281484804,5.27246838562732,4.27745777963423,1.25987779462826,4.31257693094915,0,0,0,1.54355661621568,2.29226751951005,2.06268836910977,11.5320382689971,13.7537654610729,6.97214543856797,1.0165335962074,0,0,0,0,5.69240209984969,8.4528027170742,1.76272340924412,2.56511282830212,2.10324961351382,13.139945282575,12.589506834242,3.1847607795888,3.06705507258356,3.67687514644008,13.2139057199266,15.5778552463929,18.4327839907492,12.3973110466382,12.9912453915422,7.29278718779464,15.0758819460746,12.9435400307286,17.1134037510027,15.3206864446307,13.5253096759148,10.6247684120421,0.227178579999552,1.20914496170857,0.289864488701678,0,0,0,0,0,1.40444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.517875767294343,0.890652834388949,1.04091196059682,1.21786191324856,1.15307748628029,1.20578112442098,0.823120949949934,0.502666365318702,0,0.433798070759735,0,0,0,0,0,14.0534782565543,12.7762491156208,0,0,0,0,23.2175491077475,32.0250421973039,12.4397808591736,26.7689453096106,20.4572365864264,14.5451631191692,19.4689515681309,0.203678727700633,0,0.252722758433675,2.10441855886474,0.130120442962704,0.919608417733892,1.80062129805349,1.65775299619287,2.58538696775046,2.562274405697,4.12287588062807,7.76110112217047,0.215567992932842,0,0.351902248327898,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0.817357396570186,0.329119699826961,0.164167464079095,0.243206428637567,0.438599962275997,0.219550115291051,0,26.2862435705159,8.33527360272204,0,0,0.213288250535234,0.464473343720877,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0.754005626400808,0,0.58489226135736,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0,0,0.608580364165509,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0.252578877947112,0,0.482443521363367,0.739012760666419,0.757965647081939,1.14075483509418,0.339490171550376,0.469380496577004,0.670025029767263,0.476087281772027,0.390267295715598,0.945810864637146,0.8858587585951,1.75400245523236,0.491589944147214,0.345369963731791,0.578596234326046,0,0,1.47529281905711,0.551873492609465,15.2523060488402,10.7834751664827,0,0.252470927204373,1.26203287766503,0.780877488593277,2.36965737506079,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.75353514746787,2.37172666767914,12.2102100240287,1.56134093729095,0.178065603667255,0.651547837414304,1.64970122972535,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,1.03135543248187,5.44703369206061,0.540183282093931,0.646793418913773,1.07168517515796,0.886701168211368,1.24858172321449,1.97458824722545,2.74018454203139,0.704015124191131,2.1183207086382,0,0.32977250588296,0,0,0,0,0.291480836629851,15.9465759729038,0.170870880797853,0,0.185194527369712,0,0.546776910884101,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.627264888043406,0.655087691238533,0.404593039154462,0.578574190077352,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0,0.724752362478018,0.576060012515731,0,0.810900861160657,0.308132871494482,0,0.179026695667481,0.198681354781265,0.360586348559907,0.295379054349154,0.100966449948148,0,0.100826185136841,0,0,0,0.680191150845634,0.665957860122194,0.717710852875806,0.167884616364078,0.386379188064381,0.563047426353546,0.183151624267265,0,0,15.2482997506608,15.1907328047368,18.9055519435001,16.497905504994,13.0165678756422,26.4387864086395,17.550585006027,20.2644541450899,23.5634052671786,26.9235362110946,0.207574695168353,0.798049746802062,1.19513524027894,1.45864030240976,2.72497111416377,2.38996560985018,2.22246727801615,2.06035057238894,2.24643446714271,0.505394423527595,1.77435509923168,2.07488975524684,1.77918864192777,1.98477972455095,2.23998328926892,1.42888107384922,2.0859178670074,1.35036454324594,0.824171801606613,1.76638704161277,3.42869252385415,1.4198064492747,2.38436189947321,2.32554266611726,1.50575008664529,1.86152137361688,1.09756783723664,1.57841826862706,1.22223702461276,1.12228454331548,0.949080144993393,1.0835493061312,2.04615521584845,2.47898945897546,1.92906610981141,6.74488560432454,2.10538447600868,1.71896843238639,1.53030665655075,1.32354851471709,0.927471342481686
|short_description=p4@Rtn1
|short_description=p4@Rtn1
}}
}}

Revision as of 01:16, 18 April 2012

Short description:p4@Rtn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rtn1_5end
Coexpression cluster:NA
Association with transcript: 179bp_to_NM_153457, uc007nvk.1_5end
EntrezGene:Rtn1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Rtn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.59
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I212.78
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.22
corpus striatum, adult.CNhs10487.19-21D832.03
corpus striatum, neonate N00.CNhs11226.630-43F112.44
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F220.46
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E826.29
hippocampus, neonate N00.CNhs11228.627-43G18.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C215.25
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A115.25
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.91
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.56
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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