Personal tools

FFCP PHASE1:Mm9::chr13:55313146..55313222,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Nsd1_5end
|description=CAGE_peak_1_at_Nsd1_5end
|id=chr13:55313146..55313222,+
|id=chr13:55313146..55313222,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=8.32774004944929,15.7038933437712,12.2849794635175,25.1045295384669,21.5385163876929,15.1091344720701,9.1108929832255,8.13476937681931,1.83025338797167,2.34064526321993,2.56826952338257,2.31339261086476,15.4080656938085,10.8401298999557,10.3264026162855,12.3509913107794,10.4934281719222,15.930839350591,22.4867671113412,18.2487550273153,8.92954546586233,0.198581902401771,0,7.35965144849671,7.11168771308227,10.3361753540704,12.9228598847722,12.4973314957816,10.8313349090133,15.6258680451157,5.98672378769323,4.44521471421742,5.53558308826113,0,11.554064790051,9.64160943079256,11.637653306955,18.4153917524239,15.626706890476,15.1821885752402,24.1174910092716,21.8574555186703,22.3334762394331,3.52511090331616,3.75094645512204,7.52541683862894,0.782391344348039,3.48840250208714,3.07560655828261,2.13872888981712,5.31948402176378,2.87505128729943,18.456086666351,18.1340535502836,13.1076581665561,6.17422646486273,9.74213695791773,5.67239301505187,12.7459370341547,6.34789175126439,6.33831403506179,3.38844532069132,1.77858959222228,3.5995988691256,0.988866362566974,2.1314403448383,1.49800055259202,0.384218305321555,15.2423730093462,8.23536223823313,12.4091727197315,4.85606673486466,7.28866185140325,12.1265891222804,13.9934387686625,10.1114066527102,8.8092704799511,11.8749224419225,10.752457327937,9.75958529203434,12.6252948171325,16.1483144872596,6.42120897703176,5.6276261003168,11.4598685832608,9.1334861496837,11.3897344639282,11.5567656411686,9.69295274664756,11.7891633766585,14.2033599463822,10.3250865237766,2.719885334831,9.71465744948071,5.84798775702902,5.37632264516803,7.44355426698285,1.70430322578058,0.259786004602869,2.12003744706204,7.32385782838739,0,0,0,4.5463118612355,6.84071636782766,9.60496445528088,8.33542321949138,24.081223179187,9.20341262201914,9.71517829890361,4.87144765299426,10.8389283710347,13.1128697280782,12.2292255421133,11.1843266283411,9.88779870937496,7.51916655983541,7.96149496754887,12.6178142958979,11.0420759230197,11.6370060752453,0,11.7112318804619,13.6140359428746,15.5828803677241,6.94927722134338,5.99902730993408,6.86179226194549,7.33974133083631,7.32000964509802,13.9476330845279,4.86708096538374,6.13717097592793,8.3115217823824,10.058958310201,10.9986512958342,8.8328949133166,4.0435641349388,8.62811609134543,7.80722657776222,7.81667155073808,11.1638520479317,10.8507468841715,10.9538763633638,10.3772113430728,12.087522468205,6.98499100995342,10.3472636607764,13.2374256117473,11.0849208223288,8.32943783224784,8.89751197521913,12.537077994798,12.1411460480687,7.36426787228425,7.72434506044558,6.94839349209731,7.38825098428541,10.3562886267751,8.20841209933837,7.38254451990161,12.7842157216014,11.0187969778546,11.415766353666,10.4640275137684,11.5357562601836,10.9759421825139,11.8483091937706,9.68588038066662,11.1874957173281,11.2573990317506,5.92785311285837,6.84452735677896,7.78072809687271,11.8340304236177,22.1380584599145,9.25576983322405,8.53153002140936,11.8440702648824,13.0156135935314,13.3111126251406,11.1189021922435,9.51128130562796,14.7104009078799,11.0348299665087,11.0587491872119,7.95825888164603,14.0374142725766,12.5834717211591,15.9942156907274,12.7450414882795,4.74169752382704,11.6533482861923,9.01661885384643,8.75700709734851,9.69762435838129,9.67874314486396,10.3075555512539,9.00421902675573,6.75094529717912,6.78684401569903,9.48648406678877,10.3443965543978,10.0245087507734,9.44420872016386,9.33156558387113,8.20002343158217,8.14802725700543,8.0554918486227,6.48540907100142,7.68771956926628,14.3768206527355,8.93138274404408,10.6092808858951,7.07220858251913,7.71408878144222,10.6137574699941,12.9327233116623,10.8010104709176,12.87423313892,8.14776411720903,7.74477819352057,15.9130944569725,6.66522194480839,16.3912264200551,12.6108115284953,12.4020226203314,16.9022054776936,13.9283817508377,13.6421135674058,14.6095549167327,10.5553898757491,8.70249094109935,9.34352118736169,9.10591262805617,4.65596710964597,9.02529986759964,0,7.57412781613119,7.88770548540642,7.41833614163613,6.46270193198397,4.30143836314594,6.46116154838943,8.49229592366497,8.09621403349789,3.79932615284705,10.2774822266096,9.63963949265421,9.65192579416227,4.45164009168138,9.77321756121457,9.89820737835213,6.63725691699814,7.76898035695941,9.67435382287203,7.35559811048003,9.7449624650655,12.2974059177571,14.4719844174204,14.1778154496227,12.1209108650805,14.2216541071117,9.48767477174989,4.12542172992747,10.2131881726136,8.64293251350289,5.56242340265844,9.43082954139006,12.945837055886,8.74007206250146,11.6829804627506,6.69822888052118,12.9069439435041,12.0744280392378,8.82113592219848,10.3878339353132,10.9795810153216,14.7766666073982,8.23669173621642,11.6540038818993,16.0314460146418,6.86073617438886,13.3279287022325,8.04908785056568,9.25972636848558,9.79515976424393,9.29520748502971,9.15112692826091,7.47905091972963,5.87796099759364,5.94259887359022,2.86401185404534,11.2299277721303,11.3858901591035,10.5845234005365,16.0997987931141,13.9752040797554,10.7891477107857,10.2490285099417,12.8260411572175,10.4988128366352,9.32008969630389,3.94585057078933,10.1671251309906,7.77654905148359,10.5003641705786,9.94530640778529,8.78571852552046,10.0927225235348,14.5828911025224,11.0102311646996,5.07326653734613,5.76060012515731,7.90027801570446,7.50083296573608,7.18976700153791,9.35429925440124,10.5625750443814,14.9011016085949,10.4570041082373,11.8151621739662,11.9140410938814,9.60205763852998,13.7123611786103,12.6695244961678,16.4522249204963,10.7526750007043,11.5632495643758,11.9872414821995,8.07424709485281,12.4234616109418,11.0118068598349,7.69498149349846,9.34073283763052,14.5770497773765,16.0503073291316,6.7770221114048,6.90487854760765,5.72895513439397,9.45192502890282,6.16574267793578,2.2661816921691,4.72515750162264,3.15224842256954,5.43770890781046,4.65984280576638,12.2469070149328,13.167820822234,9.90254913373978,9.48116196566347,7.1268475293514,10.2952364732008,9.11211583986622,9.68364769022803,10.5903339165299,13.1402550117175,8.36481689637791,11.3175804831646,13.1098110457835,13.8294329194518,16.3116731833942,12.859929664643,15.0649623728312,15.046919196169,10.3021475200827,12.0703114510206,6.51451579532289,10.6485483695602,12.8755542571553,11.3370204973216,13.5517507798076,14.2152541258017,11.7073902638574,10.5227884575137,9.64209208305619,12.3451299764702,14.2362021749009,12.1160513321943,10.2307760792422,15.1838104362247,13.696369379661,8.24374907195222,10.9947855969342,12.6773921888496,7.07766828654721,8.38247392654159,7.41977073985349
|phase1_expression=8.32774004944929,15.7038933437712,12.2849794635175,25.1045295384669,21.5385163876929,15.1091344720701,9.1108929832255,8.13476937681931,1.83025338797167,2.34064526321993,2.56826952338257,2.31339261086476,15.4080656938085,10.8401298999557,10.3264026162855,12.3509913107794,10.4934281719222,15.930839350591,22.4867671113412,18.2487550273153,8.92954546586233,0.198581902401771,0,7.35965144849671,7.11168771308227,10.3361753540704,12.9228598847722,12.4973314957816,10.8313349090133,15.6258680451157,5.98672378769323,4.44521471421742,5.53558308826113,0,11.554064790051,9.64160943079256,11.637653306955,18.4153917524239,15.626706890476,15.1821885752402,24.1174910092716,21.8574555186703,22.3334762394331,3.52511090331616,3.75094645512204,7.52541683862894,0.782391344348039,3.48840250208714,3.07560655828261,2.13872888981712,5.31948402176378,2.87505128729943,18.456086666351,18.1340535502836,13.1076581665561,6.17422646486273,9.74213695791773,5.67239301505187,12.7459370341547,6.34789175126439,6.33831403506179,3.38844532069132,1.77858959222228,3.5995988691256,0.988866362566974,2.1314403448383,1.49800055259202,0.384218305321555,15.2423730093462,8.23536223823313,12.4091727197315,4.85606673486466,7.28866185140325,12.1265891222804,13.9934387686625,10.1114066527102,8.8092704799511,11.8749224419225,10.752457327937,9.75958529203434,12.6252948171325,16.1483144872596,6.42120897703176,5.6276261003168,11.4598685832608,9.1334861496837,11.3897344639282,11.5567656411686,9.69295274664756,11.7891633766585,14.2033599463822,10.3250865237766,2.719885334831,9.71465744948071,5.84798775702902,5.37632264516803,7.44355426698285,1.70430322578058,0.259786004602869,2.12003744706204,7.32385782838739,0,0,0,4.5463118612355,6.84071636782766,9.60496445528088,8.33542321949138,24.081223179187,9.20341262201914,9.71517829890361,4.87144765299426,10.8389283710347,13.1128697280782,12.2292255421133,11.1843266283411,9.88779870937496,7.51916655983541,7.96149496754887,12.6178142958979,11.0420759230197,11.6370060752453,0,11.7112318804619,13.6140359428746,15.5828803677241,6.94927722134338,5.99902730993408,6.86179226194549,7.33974133083631,7.32000964509802,13.9476330845279,4.86708096538374,6.13717097592793,8.3115217823824,10.058958310201,10.9986512958342,8.8328949133166,4.0435641349388,8.62811609134543,7.80722657776222,7.81667155073808,11.1638520479317,10.8507468841715,10.9538763633638,10.3772113430728,12.087522468205,6.98499100995342,10.3472636607764,13.2374256117473,11.0849208223288,8.32943783224784,8.89751197521913,12.537077994798,12.1411460480687,7.36426787228425,7.72434506044558,6.94839349209731,7.38825098428541,10.3562886267751,8.20841209933837,7.38254451990161,12.7842157216014,11.0187969778546,11.415766353666,10.4640275137684,11.5357562601836,10.9759421825139,11.8483091937706,9.68588038066662,11.1874957173281,11.2573990317506,5.92785311285837,6.84452735677896,7.78072809687271,11.8340304236177,22.1380584599145,9.25576983322405,8.53153002140936,11.8440702648824,13.0156135935314,13.3111126251406,11.1189021922435,9.51128130562796,14.7104009078799,11.0348299665087,11.0587491872119,7.95825888164603,14.0374142725766,12.5834717211591,15.9942156907274,12.7450414882795,4.74169752382704,11.6533482861923,9.01661885384643,8.75700709734851,9.69762435838129,9.67874314486396,10.3075555512539,9.00421902675573,6.75094529717912,6.78684401569903,9.48648406678877,10.3443965543978,10.0245087507734,9.44420872016386,9.33156558387113,8.20002343158217,8.14802725700543,8.0554918486227,6.48540907100142,7.68771956926628,14.3768206527355,8.93138274404408,10.6092808858951,7.07220858251913,7.71408878144222,10.6137574699941,12.9327233116623,10.8010104709176,12.87423313892,8.14776411720903,7.74477819352057,15.9130944569725,6.66522194480839,16.3912264200551,12.6108115284953,12.4020226203314,16.9022054776936,13.9283817508377,13.6421135674058,14.6095549167327,10.5553898757491,8.70249094109935,9.34352118736169,9.10591262805617,4.65596710964597,9.02529986759964,0,7.57412781613119,7.88770548540642,7.41833614163613,6.46270193198397,4.30143836314594,6.46116154838943,8.49229592366497,8.09621403349789,3.79932615284705,10.2774822266096,9.63963949265421,9.65192579416227,4.45164009168138,9.77321756121457,9.89820737835213,6.63725691699814,7.76898035695941,9.67435382287203,7.35559811048003,9.7449624650655,12.2974059177571,14.4719844174204,14.1778154496227,12.1209108650805,14.2216541071117,9.48767477174989,4.12542172992747,10.2131881726136,8.64293251350289,5.56242340265844,9.43082954139006,12.945837055886,8.74007206250146,11.6829804627506,6.69822888052118,12.9069439435041,12.0744280392378,8.82113592219848,10.3878339353132,10.9795810153216,14.7766666073982,8.23669173621642,11.6540038818993,16.0314460146418,6.86073617438886,13.3279287022325,8.04908785056568,9.25972636848558,9.79515976424393,9.29520748502971,9.15112692826091,7.47905091972963,5.87796099759364,5.94259887359022,2.86401185404534,11.2299277721303,11.3858901591035,10.5845234005365,16.0997987931141,13.9752040797554,10.7891477107857,10.2490285099417,12.8260411572175,10.4988128366352,9.32008969630389,3.94585057078933,10.1671251309906,7.77654905148359,10.5003641705786,9.94530640778529,8.78571852552046,10.0927225235348,14.5828911025224,11.0102311646996,5.07326653734613,5.76060012515731,7.90027801570446,7.50083296573608,7.18976700153791,9.35429925440124,10.5625750443814,14.9011016085949,10.4570041082373,11.8151621739662,11.9140410938814,9.60205763852998,13.7123611786103,12.6695244961678,16.4522249204963,10.7526750007043,11.5632495643758,11.9872414821995,8.07424709485281,12.4234616109418,11.0118068598349,7.69498149349846,9.34073283763052,14.5770497773765,16.0503073291316,6.7770221114048,6.90487854760765,5.72895513439397,9.45192502890282,6.16574267793578,2.2661816921691,4.72515750162264,3.15224842256954,5.43770890781046,4.65984280576638,12.2469070149328,13.167820822234,9.90254913373978,9.48116196566347,7.1268475293514,10.2952364732008,9.11211583986622,9.68364769022803,10.5903339165299,13.1402550117175,8.36481689637791,11.3175804831646,13.1098110457835,13.8294329194518,16.3116731833942,12.859929664643,15.0649623728312,15.046919196169,10.3021475200827,12.0703114510206,6.51451579532289,10.6485483695602,12.8755542571553,11.3370204973216,13.5517507798076,14.2152541258017,11.7073902638574,10.5227884575137,9.64209208305619,12.3451299764702,14.2362021749009,12.1160513321943,10.2307760792422,15.1838104362247,13.696369379661,8.24374907195222,10.9947855969342,12.6773921888496,7.07766828654721,8.38247392654159,7.41977073985349
|short_description=p1@Nsd1
|short_description=p1@Nsd1
}}
}}

Revision as of 02:31, 18 April 2012

Short description:p1@Nsd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nsd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_uc007qqg.1_5end
EntrezGene:Nsd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nsd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.11
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.41
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I112.92
GP2+ M cell, pool3.CNhs13240.11847-124I212.50
Ileum epithelium, pool1.CNhs13199.10252-104B910.83
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.55
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H115.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H221.86
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H422.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.13
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.99
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.63
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.56
Mouse Schwann, donor1.CNhs12507.11728-123D99.69
Mouse Schwann, donor2.CNhs12573.11746-123F911.79
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.34
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C59.72
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F513.11
adrenal gland, neonate N00.CNhs11191.1311-23C112.23
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F512.62
bone (os femoris), neonate N16.CNhs11225.1525-43A611.04
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A47.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F113.95
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G48.63
eyeball, embryo E12.CNhs11016.345-16C67.81
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C911.16
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C610.95
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G812.09
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E210.35
forelimb, embryo E12.CNhs10600.359-14H213.24
forelimb, embryo E13.CNhs10589.384-1E211.08
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E78.90
forelimb, embryo E17.CNhs10598.1517-43C412.54
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.39
heart, embryo E11.CNhs10586.331-24E910.36
heart, embryo E12.CNhs11015.353-12F58.21
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G311.54
heart, neonate N00.CNhs11213.639-21E310.98
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G111.19
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G111.83
intestinal mucosa, adult.CNhs10506.860-29I322.14
intestine, adult.CNhs10496.178-9A39.26
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D511.84
intestine, embryo E15.CNhs10602.976-16D813.02
intestine, embryo E16.CNhs10585.463-22H413.31
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F79.51
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F27.96
intestine, neonate N10.CNhs11098.755-23A514.04
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E315.99
intestine, neonate N30.CNhs11131.1384-42G112.75
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F811.65
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G79.68
kidney, neonate N10.CNhs11206.758-6D510.31
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B29.49
liver, embryo E12.CNhs10601.355-15F810.34
liver, embryo E13.CNhs10524.378-3H610.02
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A38.15
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F46.49
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B910.61
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G210.80
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A615.91
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E512.61
lung, neonate N07.CNhs11111.715-19A312.40
lung, neonate N10.CNhs11219.750-23E616.90
lung, neonate N20.CNhs11109.822-18A413.93
lung, neonate N25.CNhs11119.1359-25C713.64
lung, neonate N30.CNhs11133.1394-42H214.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.49
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I79.65
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I49.77
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E57.36
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D714.18
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B912.95
pituitary gland, embryo E16.CNhs11036.449-43F68.74
pituitary gland, embryo E17.CNhs11039.1265-44F511.68
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I712.91
placenta, adult pregnant day17.CNhs10464.577-18G312.07
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G410.98
skin, neonate N03.CNhs11215.662-22H314.78
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C411.65
small intestine, neonate N16.CNhs11114.790-21I116.03
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G213.33
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F29.26
spleen, neonate N10.CNhs11116.752-24D19.80
spleen, neonate N20.CNhs11112.824-19H19.30
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.94
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E311.23
stomach, embryo E15.CNhs10603.1252-16G811.39
stomach, embryo E16.CNhs11022.459-17D410.58
stomach, embryo E17.CNhs11006.1035-18D516.10
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B810.79
stomach, neonate N07.CNhs11210.718-18A910.25
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F510.17
testis, embryo E15.CNhs11034.443-27C57.78
testis, embryo E16.CNhs11033.470-26G510.50
testis, embryo E17.CNhs11029.486-18I59.95
testis, embryo E18.CNhs11027.503-18G58.79
testis, neonate N00.CNhs11189.1300-22B710.09
testis, neonate N07.CNhs11222.726-26I414.58
testis, neonate N10.CNhs11204.763-44D911.01
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B57.90
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I27.19
thymus, embryo E16.CNhs11002.456-26C59.35
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G414.90
thymus, neonate N02.CNhs11181.1541-43F810.46
thymus, neonate N03.CNhs11137.2104-43C711.82
thymus, neonate N06.CNhs11197.681-26C411.91
thymus, neonate N07.CNhs11211.713-19D39.60
thymus, neonate N10.CNhs11194.748-24E413.71
thymus, neonate N20.CNhs11186.820-7A212.67
thymus, neonate N25.CNhs11125.1362-25G716.45
thymus, neonate N30.CNhs11132.1393-42G210.75
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.07
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.42
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F816.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I812.25
whole body, embryo E12.CNhs10587.857-27C913.17
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F210.30
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.18
whole body, embryo E17.5.CNhs10513.490-9F913.70
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B310.99
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:55313146..55313222,%2B&oldid=806383"