Personal tools

FFCP PHASE1:Mm9::chr19:5729618..5729700,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:5729618..5729700,-
|short_description=p2@Fam89b
|description=CAGE_peak_2_at_Fam89b_5end
|association_with_transcript=0bp_to_ENSMUST00000099955,ENSMUST00000116558,ENSMUST00000161368,NM_023166,NM_181452_5end
|EntrezGene=17826
|EntrezGene=17826
|HGNC=
|HGNC=
|UniProt=Q9QUI1,Q05DI7,Q7TMI7
|UniProt=Q9QUI1,Q05DI7,Q7TMI7
|association_with_transcript=0bp_to_ENSMUST00000099955,ENSMUST00000116558,ENSMUST00000161368,NM_023166,NM_181452_5end
|description=CAGE_peak_2_at_Fam89b_5end
|id=chr19:5729618..5729700,-
|ontology_enrichment_disease=
|phase1_expression=64.2196876890224,13.2610654902957,16.3799726180233,16.9379958331825,11.520601788766,22.1600638923695,17.5209480446644,44.5475465873438,29.0024767632433,44.9403890538227,6.16384685611818,6.30200056063158,26.5361131393369,43.2730991974037,37.3082933233542,39.8876276757957,65.7588165440458,23.3442002365096,19.6073640056206,27.585327366872,35.292965412694,27.8014663362479,25.8587791247546,19.8390604263824,24.31738379312,16.0784949952206,18.5227658348402,28.6576739472232,24.893067948785,16.3819584343955,15.299405235216,8.89042942843484,14.1464901144451,0,13.2871745085586,12.8000676926039,8.98345167554424,84.1248577781185,78.13353445238,62.299325532882,69.9995470756907,65.5723665560108,68.9424701304238,78.5596144167602,84.5483606370751,93.2417500981342,151.001529459172,97.0211945892987,113.577756473722,94.1040711519532,52.7748809527617,56.0635001023389,14.5970867270231,39.1695556686126,28.9040667262519,79.2359062990717,76.7909619035868,81.4761905798359,102.372129194956,76.7036919944448,97.6100361399516,107.752561197984,88.0401848150028,294.717157409658,314.459503296298,331.083733564883,146.204853932982,168.287617730841,131.582118019458,122.315380128512,134.187325342182,51.9884791614923,58.5301633521776,115.386332860487,114.15195598272,113.983129539643,24.2254938198655,18.6423513604374,26.1131106535614,111.048254268823,90.3897918791807,92.2016665885465,28.1974828991395,32.6402313818374,33.1572197675678,39.7748590389451,43.9928493669228,63.9350099180781,49.4492042465692,69.9792646588834,24.9283460283443,31.8356834483113,27.8788246820178,18.3499085156858,9.09686984426737,16.5769948226014,41.290659518735,127.822741933543,117.942846089702,120.488794908026,44.2248338098777,52.6138557398703,22.9324715735981,21.3320010945999,37.2364590539288,39.5241390141154,35.8922355960496,29.2310732080794,32.6261733395436,37.5558611834007,41.6364784238726,28.6197549613413,34.5923245884088,32.1039224377086,37.5107975762898,48.004637887936,30.1577860635936,44.5366019313328,53.0766331169925,52.2506925330132,45.4933528028411,34.911018225736,14.9113408974498,15.517382241612,18.431310199584,22.9911349687732,36.4237978497998,37.1939693215913,40.9166131175268,17.3757141709594,20.5875271268382,67.2250783803825,17.7300806596122,19.1786592997748,21.1943805450751,16.5486088329113,55.2987745707217,39.8102305952298,41.193809624689,17.2562321826909,38.3855306739976,68.5108271211749,57.2597572781011,38.4297285481073,43.6113959560012,40.6120493302974,47.1319674535436,13.9699820199068,73.724253583032,54.8407632486676,55.6005552358078,59.8404349527279,36.7022368977789,57.4616074761575,40.5390808723649,45.9769156350719,34.4084461783485,39.8889256027809,37.5095819202182,44.1177895500619,39.8694301967864,39.9737776443453,48.2959260593829,38.5657894224912,31.3162239161378,33.2523540993083,34.0707219777516,40.4008084590406,40.1526033788892,38.5793540585874,38.6698221533732,36.2575968814824,30.0783657948739,40.6645448843926,20.3981250107203,66.1676657598799,17.1817767151575,10.5780226665418,43.724091359723,42.4993109504602,33.118937559778,26.4205417256579,25.3510969983152,30.4361001780095,18.0321043386914,32.7750919900782,21.6148279568232,27.65494961372,25.1503672383665,14.3811105384675,18.8040103390984,17.1261494998756,57.4693739887837,33.0178201442116,30.4310886317317,28.3075345704987,31.4203029211554,29.0362294345919,26.6225821293123,21.5510816050219,17.4268587903926,22.8284753255331,28.1629995732791,34.5369368832315,41.4739479688858,41.5994907911979,40.3691641563121,35.2118653238529,36.411496804743,24.7418678207697,26.1037715107807,21.1412288154823,15.814502718009,34.6091081331708,19.0342980599882,20.2063102357689,13.4548060141434,19.7801843758981,52.4699060073157,55.3314922369815,48.7265279561657,37.5136639563166,33.3260152569673,45.0591832518484,56.4163428899853,59.7108962444864,48.5516243847068,57.1378899293839,53.7362570375732,42.9321884555234,47.4883700131213,48.7467327419694,146.267545421094,150.661874417783,35.4070276573706,44.1498794087572,29.0596567877903,22.7390671988874,63.9346286969034,52.0090110041008,58.0535123725912,51.1474755028596,53.8558494331997,65.9553882349044,59.0416486318344,49.2553163572568,51.0061484110367,59.6201950139076,54.5497133566202,17.9939937196212,42.8659057328971,59.6519772285305,54.567131383448,58.3994235322776,63.7176664031822,40.5443662378819,37.4881210636291,27.3477365646052,43.4093782534736,33.817866273832,34.6293912845416,33.4451031119305,41.7101932710124,42.980999079271,45.3300016872495,47.442349894166,33.0226417581174,43.3947236615458,54.3306471887569,50.7978773024874,43.6256974759993,42.8085162244969,35.5425884500581,60.8929898229199,16.6616912725234,27.9618333540243,65.0558774262138,31.8230468177056,38.9129268337132,34.0164896594799,31.3949264728249,26.5908257586999,20.1121777274597,39.3101640262281,43.9138163650481,49.120074575247,29.6311243791539,43.889850482093,40.1881029499814,39.5786239647284,36.5453624486789,30.2295137019101,38.8341926390431,34.3681422485441,51.5627669537251,41.0705323596234,27.9733832728465,29.0632731460112,26.6402327770337,24.1407180028829,28.2674818580649,28.0078857922912,23.4603101658145,45.3577698553456,28.1846469342095,38.1267192412146,42.1919150665599,41.2236519289381,42.8810613946067,32.777488345211,40.7229618100766,45.3111259256946,37.6445046488302,19.0851455452545,21.8902804755978,34.4452121484714,42.1668447803541,32.1485295925909,24.1652730738699,27.7491378284596,35.3652811510651,25.6016307477534,27.7656311088205,22.8184176882814,25.2244530028049,28.7354627639995,28.2627854145282,28.9597643337392,28.5179641323028,36.2768613784338,6.88156455459601,5.9211145362254,9.90519236548063,39.7970563706312,38.8502724183947,45.9710576910835,33.8702038944924,51.1603546116071,22.0253218620656,25.7782132444019,21.7700295106971,19.9349691518678,13.7016503954128,11.3309084608455,16.2005400055633,17.1122057225204,11.7817026335893,19.1571315348173,54.3845701341086,68.2332533515763,54.9762210528312,43.7592090722929,56.1763275842993,49.2700602646038,39.5599175486875,33.7897493871787,42.3613356661196,39.4207650351524,40.8101672823286,46.0248272982026,48.1317348395196,44.9456569882182,46.4652943850911,55.7263618801196,39.1689021693612,41.6683916201603,38.7360746755108,40.7741008772281,37.0298792576249,43.126620896719,39.1035351513606,37.4993754911408,36.5144396011483,34.8612184513707,36.7685225474273,32.6206442182925,37.7535436491496,31.4239672128334,40.0986361259709,42.2584229391167,35.1938697125933,37.4947155670038,40.1245750840774,63.4518867962383,42.3416211286189,49.4203424311086,55.2823279678957,65.7362428976156,59.3581659188279
|phase1_expression=64.2196876890224,13.2610654902957,16.3799726180233,16.9379958331825,11.520601788766,22.1600638923695,17.5209480446644,44.5475465873438,29.0024767632433,44.9403890538227,6.16384685611818,6.30200056063158,26.5361131393369,43.2730991974037,37.3082933233542,39.8876276757957,65.7588165440458,23.3442002365096,19.6073640056206,27.585327366872,35.292965412694,27.8014663362479,25.8587791247546,19.8390604263824,24.31738379312,16.0784949952206,18.5227658348402,28.6576739472232,24.893067948785,16.3819584343955,15.299405235216,8.89042942843484,14.1464901144451,0,13.2871745085586,12.8000676926039,8.98345167554424,84.1248577781185,78.13353445238,62.299325532882,69.9995470756907,65.5723665560108,68.9424701304238,78.5596144167602,84.5483606370751,93.2417500981342,151.001529459172,97.0211945892987,113.577756473722,94.1040711519532,52.7748809527617,56.0635001023389,14.5970867270231,39.1695556686126,28.9040667262519,79.2359062990717,76.7909619035868,81.4761905798359,102.372129194956,76.7036919944448,97.6100361399516,107.752561197984,88.0401848150028,294.717157409658,314.459503296298,331.083733564883,146.204853932982,168.287617730841,131.582118019458,122.315380128512,134.187325342182,51.9884791614923,58.5301633521776,115.386332860487,114.15195598272,113.983129539643,24.2254938198655,18.6423513604374,26.1131106535614,111.048254268823,90.3897918791807,92.2016665885465,28.1974828991395,32.6402313818374,33.1572197675678,39.7748590389451,43.9928493669228,63.9350099180781,49.4492042465692,69.9792646588834,24.9283460283443,31.8356834483113,27.8788246820178,18.3499085156858,9.09686984426737,16.5769948226014,41.290659518735,127.822741933543,117.942846089702,120.488794908026,44.2248338098777,52.6138557398703,22.9324715735981,21.3320010945999,37.2364590539288,39.5241390141154,35.8922355960496,29.2310732080794,32.6261733395436,37.5558611834007,41.6364784238726,28.6197549613413,34.5923245884088,32.1039224377086,37.5107975762898,48.004637887936,30.1577860635936,44.5366019313328,53.0766331169925,52.2506925330132,45.4933528028411,34.911018225736,14.9113408974498,15.517382241612,18.431310199584,22.9911349687732,36.4237978497998,37.1939693215913,40.9166131175268,17.3757141709594,20.5875271268382,67.2250783803825,17.7300806596122,19.1786592997748,21.1943805450751,16.5486088329113,55.2987745707217,39.8102305952298,41.193809624689,17.2562321826909,38.3855306739976,68.5108271211749,57.2597572781011,38.4297285481073,43.6113959560012,40.6120493302974,47.1319674535436,13.9699820199068,73.724253583032,54.8407632486676,55.6005552358078,59.8404349527279,36.7022368977789,57.4616074761575,40.5390808723649,45.9769156350719,34.4084461783485,39.8889256027809,37.5095819202182,44.1177895500619,39.8694301967864,39.9737776443453,48.2959260593829,38.5657894224912,31.3162239161378,33.2523540993083,34.0707219777516,40.4008084590406,40.1526033788892,38.5793540585874,38.6698221533732,36.2575968814824,30.0783657948739,40.6645448843926,20.3981250107203,66.1676657598799,17.1817767151575,10.5780226665418,43.724091359723,42.4993109504602,33.118937559778,26.4205417256579,25.3510969983152,30.4361001780095,18.0321043386914,32.7750919900782,21.6148279568232,27.65494961372,25.1503672383665,14.3811105384675,18.8040103390984,17.1261494998756,57.4693739887837,33.0178201442116,30.4310886317317,28.3075345704987,31.4203029211554,29.0362294345919,26.6225821293123,21.5510816050219,17.4268587903926,22.8284753255331,28.1629995732791,34.5369368832315,41.4739479688858,41.5994907911979,40.3691641563121,35.2118653238529,36.411496804743,24.7418678207697,26.1037715107807,21.1412288154823,15.814502718009,34.6091081331708,19.0342980599882,20.2063102357689,13.4548060141434,19.7801843758981,52.4699060073157,55.3314922369815,48.7265279561657,37.5136639563166,33.3260152569673,45.0591832518484,56.4163428899853,59.7108962444864,48.5516243847068,57.1378899293839,53.7362570375732,42.9321884555234,47.4883700131213,48.7467327419694,146.267545421094,150.661874417783,35.4070276573706,44.1498794087572,29.0596567877903,22.7390671988874,63.9346286969034,52.0090110041008,58.0535123725912,51.1474755028596,53.8558494331997,65.9553882349044,59.0416486318344,49.2553163572568,51.0061484110367,59.6201950139076,54.5497133566202,17.9939937196212,42.8659057328971,59.6519772285305,54.567131383448,58.3994235322776,63.7176664031822,40.5443662378819,37.4881210636291,27.3477365646052,43.4093782534736,33.817866273832,34.6293912845416,33.4451031119305,41.7101932710124,42.980999079271,45.3300016872495,47.442349894166,33.0226417581174,43.3947236615458,54.3306471887569,50.7978773024874,43.6256974759993,42.8085162244969,35.5425884500581,60.8929898229199,16.6616912725234,27.9618333540243,65.0558774262138,31.8230468177056,38.9129268337132,34.0164896594799,31.3949264728249,26.5908257586999,20.1121777274597,39.3101640262281,43.9138163650481,49.120074575247,29.6311243791539,43.889850482093,40.1881029499814,39.5786239647284,36.5453624486789,30.2295137019101,38.8341926390431,34.3681422485441,51.5627669537251,41.0705323596234,27.9733832728465,29.0632731460112,26.6402327770337,24.1407180028829,28.2674818580649,28.0078857922912,23.4603101658145,45.3577698553456,28.1846469342095,38.1267192412146,42.1919150665599,41.2236519289381,42.8810613946067,32.777488345211,40.7229618100766,45.3111259256946,37.6445046488302,19.0851455452545,21.8902804755978,34.4452121484714,42.1668447803541,32.1485295925909,24.1652730738699,27.7491378284596,35.3652811510651,25.6016307477534,27.7656311088205,22.8184176882814,25.2244530028049,28.7354627639995,28.2627854145282,28.9597643337392,28.5179641323028,36.2768613784338,6.88156455459601,5.9211145362254,9.90519236548063,39.7970563706312,38.8502724183947,45.9710576910835,33.8702038944924,51.1603546116071,22.0253218620656,25.7782132444019,21.7700295106971,19.9349691518678,13.7016503954128,11.3309084608455,16.2005400055633,17.1122057225204,11.7817026335893,19.1571315348173,54.3845701341086,68.2332533515763,54.9762210528312,43.7592090722929,56.1763275842993,49.2700602646038,39.5599175486875,33.7897493871787,42.3613356661196,39.4207650351524,40.8101672823286,46.0248272982026,48.1317348395196,44.9456569882182,46.4652943850911,55.7263618801196,39.1689021693612,41.6683916201603,38.7360746755108,40.7741008772281,37.0298792576249,43.126620896719,39.1035351513606,37.4993754911408,36.5144396011483,34.8612184513707,36.7685225474273,32.6206442182925,37.7535436491496,31.4239672128334,40.0986361259709,42.2584229391167,35.1938697125933,37.4947155670038,40.1245750840774,63.4518867962383,42.3416211286189,49.4203424311086,55.2823279678957,65.7362428976156,59.3581659188279
|short_description=p2@Fam89b
}}
}}

Revision as of 05:11, 18 April 2012

Short description:p2@Fam89b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fam89b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000099955, ENSMUST00000116558, ENSMUST00000161368, NM_023166, NM_181452_5end
EntrezGene:Fam89b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fam89b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G764.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.94
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I722.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.52
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E944.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E729.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E843.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A137.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A339.89
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A565.76
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A627.59
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.86
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.32
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I228.66
Ileum epithelium, pool1.CNhs13199.10252-104B924.89
Ileum epithelium, pool2.CNhs13232.10253-104C116.38
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F612.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G884.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H178.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H362.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G970.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H265.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H468.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D878.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D984.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B393.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7151.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C297.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8113.58
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C394.10
Mouse Astrocytes, donor2.CNhs12078.11552-120C452.77
Mouse Astrocytes, donor3.CNhs12107.11633-122C456.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A128.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C179.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E176.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C581.48
Mouse Granule cells, donor1.CNhs12131.11713-123C3102.37
Mouse Granule cells, donor2.CNhs12357.11731-123E376.70
Mouse Granule cells, donor3.CNhs12108.11636-122C797.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6107.75
Mouse Meningeal cells, donor3.CNhs12109.11639-122D188.04
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7294.72
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7314.46
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2331.08
Mouse Microglia, donor1.CNhs12629.11718-123C8146.20
Mouse Microglia, donor2.CNhs12634.11736-123E8168.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5131.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5122.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9134.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D558.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2115.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2114.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6113.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D726.11
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4111.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F490.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D892.20
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.20
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F643.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E163.94
Mouse Schwann, donor1.CNhs12507.11728-123D949.45
Mouse Schwann, donor2.CNhs12573.11746-123F969.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F731.84
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F616.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A741.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7127.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3117.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8120.49
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G644.22
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H152.61
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G239.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B629.23
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D737.56
adrenal gland, embryo E14.CNhs11038.406-44C541.64
adrenal gland, embryo E16.CNhs11004.1254-43D628.62
adrenal gland, embryo E17.CNhs11043.1263-45I134.59
adrenal gland, embryo E18.CNhs11026.1262-18F532.10
adrenal gland, neonate N00.CNhs11191.1311-23C137.51
adrenal gland, neonate N25.CNhs11223.1377-27I348.00
amnion, adult pregnant day17.5.CNhs10488.583-22A830.16
aorta, adult.CNhs10498.46-23H144.54
bone (os femoris), adult.CNhs10483.56-12G253.08
bone (os femoris), neonate N02.CNhs11227.1985-43F552.25
bone (os femoris), neonate N16.CNhs11225.1525-43A645.49
bone (os femoris), neonate N20.CNhs11195.1350-25C334.91
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I218.43
colon, adult.CNhs10468.36-18H722.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C736.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D440.92
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D820.59
corpus striatum, neonate N00.CNhs11226.630-43F167.23
cortex, adult.CNhs10473.12-14D517.73
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B216.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B155.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A239.81
epididymis, adult.CNhs10490.58-23B241.19
eyeball, adult.CNhs10484.31-12G417.26
eyeball, embryo E12.CNhs11016.345-16C638.39
eyeball, embryo E14.CNhs10521.399-16E268.51
eyeball, embryo E15.CNhs10593.426-16C957.26
eyeball, embryo E17.CNhs11023.1261-18D438.43
eyeball, neonate N00.CNhs11207.633-15C643.61
eyeball, neonate N01.CNhs11140.1532-43E740.61
eyeball, neonate N02.CNhs11205.1551-44G847.13
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E273.72
forelimb, embryo E12.CNhs10600.359-14H254.84
forelimb, embryo E13.CNhs10589.384-1E255.60
forelimb, embryo E14.CNhs10577.413-26A859.84
forelimb, embryo E15.CNhs11007.437-20E736.70
forelimb, embryo E17.CNhs10598.1517-43C457.46
forelimb, embryo E18.CNhs11008.1520-43B540.54
gonad, embryo E13.CNhs11044.1564-45I645.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C834.41
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D239.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D537.51
heart, embryo E11.CNhs10586.331-24E944.12
heart, embryo E12.CNhs11015.353-12F539.87
heart, embryo E13.CNhs11013.376-3I939.97
heart, embryo E14.CNhs10597.403-26D448.30
heart, embryo E15.CNhs11017.431-16C838.57
heart, embryo E16.CNhs11021.457-17C631.32
heart, embryo E17.CNhs11025.479-18E533.25
heart, embryo E18.CNhs11030.1283-20G334.07
heart, neonate N00.CNhs11213.639-21E340.40
heart, neonate N03.CNhs11221.1349-25I240.15
heart, neonate N10.CNhs11118.749-24G138.58
heart, neonate N16.CNhs11209.782-15G138.67
heart, neonate N20.CNhs11127.821-26I636.26
heart, neonate N25.CNhs11196.1351-25D330.08
heart, neonate N30.CNhs11202.1390-42D240.66
hippocampus, adult.CNhs10478.13-16E820.40
hippocampus, neonate N00.CNhs11228.627-43G166.17
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I543.72
intestine, embryo E13.CNhs11010.381-16D542.50
intestine, embryo E15.CNhs10602.976-16D833.12
intestine, embryo E16.CNhs10585.463-22H426.42
intestine, embryo E17.CNhs10582.482-18D325.35
intestine, embryo E18.CNhs10526.1289-20F730.44
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E932.78
intestine, neonate N06.CNhs11102.688-20B821.61
intestine, neonate N07.CNhs11095.720-20F227.65
intestine, neonate N10.CNhs11098.755-23A525.15
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E318.80
intestine, neonate N30.CNhs11131.1384-42G117.13
kidney, embryo E14.CNhs10606.411-4I957.47
kidney, embryo E15.CNhs10997.434-16F833.02
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I228.31
kidney, embryo E18.CNhs11001.1288-20C731.42
kidney, neonate N00.CNhs11214.646-21G729.04
kidney, neonate N10.CNhs11206.758-6D526.62
kidney, neonate N20.CNhs11113.832-19I121.55
kidney, neonate N25.CNhs11122.1353-25F317.43
kidney, neonate N30.CNhs11203.1385-42H122.83
liver, adult pregnant day01.CNhs10466.508-5B228.16
liver, embryo E12.CNhs10601.355-15F834.54
liver, embryo E13.CNhs10524.378-3H641.47
liver, embryo E14.CNhs10594.409-16E141.60
liver, embryo E15.CNhs10520.433-16D740.37
liver, embryo E16.CNhs10523.462-17F535.21
liver, embryo E17.CNhs10510.481-18A336.41
liver, embryo E18.CNhs10579.499-43G424.74
liver, neonate N00.CNhs11117.641-24F426.10
liver, neonate N03.CNhs11123.1345-25G221.14
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H234.61
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A320.21
liver, neonate N25.CNhs11198.1368-26H113.45
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B152.47
lung, embryo E12.CNhs10522.354-16G255.33
lung, embryo E14.CNhs10604.404-26F848.73
lung, embryo E15.CNhs11020.432-17C537.51
lung, embryo E16.CNhs10998.458-17B633.33
lung, embryo E17.CNhs10605.480-44A645.06
lung, embryo E18.CNhs10583.1287-20I656.42
lung, neonate N00.CNhs11224.640-42C659.71
lung, neonate N06.CNhs11212.683-20E548.55
lung, neonate N07.CNhs11111.715-19A357.14
lung, neonate N10.CNhs11219.750-23E653.74
lung, neonate N20.CNhs11109.822-18A442.93
lung, neonate N25.CNhs11119.1359-25C747.49
lung, neonate N30.CNhs11133.1394-42H248.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1146.27
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1150.66
mammary gland, adult lactating day02.CNhs10480.595-22B635.41
mammary gland, adult pregnant day19.CNhs10476.588-5H244.15
medulla oblongata, adult.CNhs10477.17-12C229.06
medulla oblongata, neonate N30.CNhs11200.1396-42A322.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C763.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C252.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E158.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E353.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D765.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D949.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D451.01
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D559.62
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D654.55
olfactory brain, adult.CNhs10489.18-22I917.99
ovary, adult.CNhs10507.91-2I742.87
ovary, embryo E18.CNhs11040.505-44H759.65
ovary, neonate N00.CNhs11217.1299-22I454.57
oviduct, adult pregnant day01.CNhs10500.988-6G658.40
pancreas, adult.CNhs10486.34-16E463.72
pancreas, embryo E14.CNhs11012.405-44F440.54
pancreas, embryo E15.CNhs11042.1556-45F237.49
pancreas, embryo E16.CNhs11003.460-26E527.35
pancreas, embryo E17.CNhs10599.1558-45G343.41
pancreas, embryo E18.CNhs10580.1535-43I733.82
pancreas, neonate N00.CNhs11105.645-26G934.63
pancreas, neonate N01.CNhs11138.1531-43D733.45
pancreas, neonate N02.CNhs11139.1539-43D841.71
pancreas, neonate N16.CNhs11136.787-43B642.98
pancreas, neonate N25.CNhs11094.1555-45E245.33
pancreas, neonate N30.CNhs11182.1548-44H547.44
pituitary gland, adult.CNhs10493.21-1G833.02
pituitary gland, embryo E12.CNhs11018.346-16E643.39
pituitary gland, embryo E13.CNhs11009.370-44C754.33
pituitary gland, embryo E14.CNhs11037.398-44A550.80
pituitary gland, embryo E15.CNhs10592.427-16B943.63
pituitary gland, embryo E16.CNhs11036.449-43F642.81
pituitary gland, embryo E17.CNhs11039.1265-44F535.54
pituitary gland, neonate N00.CNhs11190.1308-22E960.89
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G327.96
prostate, adult.CNhs10470.859-1F865.06
skin, adult.CNhs10492.30-1C331.82
skin, neonate N00.CNhs11124.650-25G438.91
skin, neonate N03.CNhs11215.662-22H334.02
skin, neonate N06.CNhs11097.693-20I531.39
skin, neonate N10.CNhs11108.762-6C426.59
small intestine, neonate N16.CNhs11114.790-21I120.11
spinal cord, adult.CNhs10505.24-13C939.31
spleen, adult.CNhs10465.25-2G243.91
spleen, embryo E16.CNhs11035.461-43C149.12
spleen, embryo E18.CNhs11011.1271-21F229.63
spleen, neonate N10.CNhs11116.752-24D143.89
spleen, neonate N20.CNhs11112.824-19H140.19
spleen, neonate N25.CNhs11099.1354-25G339.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C930.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.83
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E351.56
stomach, embryo E15.CNhs10603.1252-16G841.07
stomach, embryo E16.CNhs11022.459-17D427.97
stomach, embryo E17.CNhs11006.1035-18D529.06
stomach, embryo E18.CNhs10999.1286-20C626.64
stomach, neonate N03.CNhs11193.1340-24B824.14
stomach, neonate N07.CNhs11210.718-18A928.27
stomach, neonate N25.CNhs11104.1355-25E428.01
stomach, neonate N30.CNhs11134.1386-42I123.46
submandibular gland, adult.CNhs10469.59-29C145.36
testis, adult.CNhs10504.57-7G528.18
testis, embryo E13.CNhs11031.389-23F538.13
testis, embryo E15.CNhs11034.443-27C542.19
testis, embryo E16.CNhs11033.470-26G541.22
testis, embryo E17.CNhs11029.486-18I542.88
testis, embryo E18.CNhs11027.503-18G532.78
testis, neonate N00.CNhs11189.1300-22B740.72
testis, neonate N07.CNhs11222.726-26I445.31
testis, neonate N10.CNhs11204.763-44D937.64
testis, neonate N20.CNhs11110.839-18H319.09
testis, neonate N30.CNhs11130.1391-42E221.89
thymus, adult.CNhs10471.38-12B534.45
thymus, embryo E14.CNhs11041.402-44I442.17
thymus, embryo E15.CNhs11005.430-45I232.15
thymus, embryo E16.CNhs11002.456-26C524.17
thymus, embryo E17.CNhs10581.478-18C127.75
thymus, embryo E18.CNhs10595.1273-19G435.37
thymus, neonate N02.CNhs11181.1541-43F825.60
thymus, neonate N03.CNhs11137.2104-43C727.77
thymus, neonate N06.CNhs11197.681-26C422.82
thymus, neonate N07.CNhs11211.713-19D325.22
thymus, neonate N10.CNhs11194.748-24E428.74
thymus, neonate N20.CNhs11186.820-7A228.26
thymus, neonate N25.CNhs11125.1362-25G728.96
thymus, neonate N30.CNhs11132.1393-42G228.52
tongue, adult.CNhs10499.32-1B436.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.92
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.91
urinary bladder, adult.CNhs10481.879-12E439.80
uterus, adult pregnant day19.CNhs10497.590-15F538.85
uterus, adult.CNhs10509.92-27E545.97
vagina, adult.CNhs10502.89-27D533.87
vesicular gland, adult.CNhs10491.51-27F851.16
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.78
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.93
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I854.38
whole body, embryo E12.CNhs10587.857-27C968.23
whole body, embryo E13.CNhs10512.372-23H254.98
whole body, embryo E14.5.CNhs10578.420-27D243.76
whole body, embryo E14.CNhs10519.395-14B156.18
whole body, embryo E16.CNhs10514.453-14F249.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G539.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G542.36
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.42
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G540.81
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G546.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G548.13
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G544.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G546.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G555.73
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G539.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G541.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G538.74
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G540.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G537.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G543.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G536.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G537.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G542.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G535.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G537.49
whole body, embryo E17.5.CNhs10513.490-9F940.12
whole body, embryo E17.CNhs10517.475-3I563.45
whole body, embryo E18.CNhs10516.493-3B342.34
whole body, neonate N00.CNhs10525.657-19C249.42
whole body, neonate N01.CNhs10576.659-23C655.28
whole body, neonate N06.CNhs10515.692-21D165.74
whole body, neonate N10.CNhs10518.761-6B459.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:5729618..5729700,-&oldid=826817"