DOID:4: Difference between revisions
From FANTOM5_SSTAR
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|union_of=un01;;un03; | |union_of=un01;;un03; | ||
|created_by=cr01;;cr03;;cf10 | |created_by=cr01;;cr03;;cf10 | ||
|obo_creation_date=cd01 | |obo_creation_date=cd01;;cb03;;cb005 | ||
|subset=sb001;sb010 | |subset=sb001;sb010 | ||
|adjacent_to=ad11;;ad34 | |adjacent_to=ad11;;ad34 | ||
Revision as of 13:28, 7 February 2012
| Name: | disease | ||
|---|---|---|---|
| Namespace: | name1;;name2;;name3 | ||
| Definition: | "A disease is a disposition (i) to undergo pathological processes that (ii) exists in an organism because of one or more disorders in that organism." [url:http\://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf];;def2;; | ||
| Xrefs: |
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| Synonyms: |
syn1 syn3 syn2 | ||
| Comments: | comm01;;comm02; | ||
| Alt_id: |
alt1 alt2 alt3 alt4 | ||
| Subset: | sb001;sb010 | ||
| Created by: | cr01;;cr03;;cf10 | ||
| Creation date: | cd01;;cb03;;cb005 | ||
| Has quality: | description desu;;hq10 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
NA
Children
| is a: | DOID:0014667 (disease of metabolism),DOID:0050117 (disease by infectious agent),FF:10727-110A7 (lymphangiectasia cell line:DS-1),DOID:14566 (disease of cellular proliferation),DOID:225 (syndrome),DOID:630 (genetic disease),DOID:7 (disease of anatomical entity) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
... further results Mouse (Mus musculus)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4 (disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
