Personal tools

FFCP PHASE1:Mm9::chr18:84758883..84758919,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Zfp407_5end
|description=CAGE_peak_1_at_Zfp407_5end
|id=chr18:84758883..84758919,-
|id=chr18:84758883..84758919,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=4.00372117761985,12.563114675017,10.9199817453489,12.7034968748869,11.520601788766,5.70789524500425,6.07392865548367,8.13476937681931,9.714421828465,7.95819389494778,8.90333434772626,11.1681022593471,13.353656934634,11.1023911072127,4.66353666541928,9.71881283471165,6.99561878128147,17.3504190947031,15.4939309974485,11.0341309467488,6.80346321208558,7.74469419366905,4.96279599363977,5.27974995218242,5.04700418347774,7.46501553349526,6.8921919385452,6.46413698057667,3.80046838912748,4.03248207615889,4.6563407237614,3.81018404075779,4.92051830067656,0,5.19932915552294,3.65716219788683,5.71674197534634,25.5304294749514,10.9386948233332,27.2232346866375,28.2351114254887,18.442228093878,25.7320487106511,4.90997590104751,4.76471576731718,7.15832333430558,0.782391344348039,1.09012578190223,0.878744730937887,0.58328969722285,1.53985063787899,0,14.4293041209653,7.97898356212479,10.0828139742739,4.3734104126111,5.15760191889762,5.67239301505187,2.63011399117477,2.64495489636016,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,2.8419204597844,0.299600110518405,0.384218305321555,4.14758449233911,3.91517221161903,4.6271491497304,1.14260393761521,1.10434270475807,3.30725157880376,5.36734637702124,4.5960939330501,1.10115880999389,5.74593021383345,4.14737639791857,2.50583946687368,3.56801810049398,2.6045668527838,0.558365998002762,5.06486349028512,4.12555268997387,4.12480019663135,5.97961059356232,5.77838282058432,6.73963120665338,6.57472572929034,16.232411367294,5.16254326188832,1.3599426674155,3.2382191498269,6.49776417447669,4.92829575807069,7.3031098468511,4.4311883870295,2.07828803682295,1.7666978725517,5.0703631119605,5.13305909657271,0,0,4.11332977921307,4.05375784760158,4.04419556011827,7.53613606145796,38.8406825470758,10.5393918736026,8.50078101154066,4.87144765299426,7.84092690670599,6.63179618431539,12.6995803706561,6.03199638382442,8.89901883843746,9.83275627055399,11.4999371753484,13.7501822455298,12.5879665522424,15.0311328471919,9.31958806090611,10.5401086924157,9.84399522023239,8.43008282188352,10.4239158320151,4.19931911695385,7.11593271609162,6.74057877321702,7.32000964509802,7.413606774659,6.43149984711423,10.7400492078739,5.61027720310812,7.30085683804909,7.12875546952214,10.5745925018579,4.0435641349388,9.6803253707778,12.1012011955314,5.9774547152703,10.4436035287103,14.9197769657358,12.654788842147,18.4483757210184,14.6174690313177,12.1590584247337,9.91612767491074,12.6701073712439,13.3722854364601,7.89104636739269,15.2925987074079,10.447564995665,14.610531684964,10.9468846750171,4.91549231119264,5.91900186363845,7.10408748488982,12.2204205795946,12.4298811789981,11.884096056427,10.6535131013345,14.1670246858131,13.2669717083145,15.3472403535269,11.8040296615832,13.778310399326,13.000228143165,12.9692296622485,11.6739085746032,11.1111990443253,11.6361561104257,11.8101648509127,7.99101804543684,7.20332286654991,12.5559137533843,8.72686869989696,13.4371597837197,14.3986736553472,9.92279452180119,10.8909103296605,6.89371935919098,6.84812254005213,8.0669940462567,6.25856027951241,8.04272668160862,8.15721535368718,11.5028811400281,8.08937467788799,10.59076444386,12.5459002150251,3.79335801906163,14.3953125888258,10.1436962105772,13.8482902934814,10.861339281387,14.6583863570766,9.54871710576285,10.3327103585722,9.73392112616524,8.14421281883883,9.19003143970162,10.0107063429656,9.82794975566015,12.367416181167,9.12870546248263,13.0235666266305,9.93040821947537,8.0554918486227,9.40384315295205,6.31491250332587,12.9391385874619,8.55924179637558,9.36113019343682,9.09283960609602,8.96987067609561,6.75420929908714,11.0851914099963,8.33762211790133,15.3187077855504,11.2031756611624,16.1936271319066,16.7506257441816,12.8543566078447,10.3420833364633,15.4482441224067,14.8381342064679,16.2643864030637,14.7476983244164,15.1962784041988,16.6346417368738,6.03165135757089,4.35124547054968,14.2611639175521,11.5893433447988,5.77982123956051,6.32943107597897,4.59017847054691,8.58401152494868,6.62567260774139,9.37052986311932,7.97066571611356,7.16906393857656,7.79795359288379,7.92614286208731,7.2865926301481,6.42962887404886,5.53402889125133,10.9249247583414,11.3552068166615,5.52003371368491,7.65568708961808,10.7230579932148,14.6019652173959,8.98288353773431,6.65111825322452,5.84675747243284,3.2483208216885,9.83792473420568,8.5281336745513,13.4507479906677,9.26893183800275,12.3254335594968,6.32511651449993,9.28219889233682,8.85142974959849,11.1637878299412,2.19909762430683,9.00215547132688,7.44828981297549,6.0645397984704,9.87294123612726,3.95804433848979,10.560226862867,6.56679419677843,6.83638033970382,14.3451040059088,14.6932628293274,17.7319999288778,13.0115854963419,12.9671310798598,9.03590593552537,8.90041449650446,7.86006051670122,7.84270098260245,14.4451731348375,11.6788443342908,17.6335553760122,13.4979122191848,11.0485979496006,9.93655311497972,10.6413979829406,1.90934123603023,8.85740782027179,12.4024874947378,11.9885928312199,10.4544148007234,11.7915784422936,10.3845546716312,9.75310777558964,6.80565449158477,8.94343315713371,10.5627683224777,3.38215763210514,11.5127740453864,7.61109056102649,8.16694991045,11.1077448190849,10.3063236549375,11.8530811032212,13.4110516389269,11.2199498535511,12.0792060413003,9.21696020025169,13.9044893076398,6.08175645870493,8.52500944468066,9.87398254631242,11.2786818270513,17.4839592207513,16.8273629327956,15.6550898805052,20.1932899896295,18.061013177235,17.7454085840839,18.8093709827722,21.3590288441531,22.7909959254059,10.6563280299149,5.32766288097755,6.72853924571068,4.02923079273788,8.69353173144857,10.1348536743638,12.2711588259068,12.2189976075068,11.5361583928134,9.60078132449013,5.52390283808612,7.44764167471216,4.1244763762485,7.53590771747707,3.7769694869485,9.45031500324528,8.55610286126019,10.4222754066367,6.73088405277366,7.26511433089237,16.3600198094423,9.56108192223151,10.4535888339366,5.65955539095552,4.77993121970037,11.3345831178824,10.7138229764225,9.94849549734627,11.3713745293709,9.88569269571935,11.6948331659367,13.4843770756631,14.7898102055248,15.7947539627936,10.9547548995107,10.8931266388164,12.5390993301408,9.47797571847605,12.3647092912894,10.6289468239479,10.8260241757196,14.7830437767339,7.55801366488108,12.3283288344083,9.7306799075428,9.3293266165114,11.3119975918272,13.1729990430486,7.85599180320834,10.5585166130515,11.4265199555654,8.18462086339379,11.3103894065755,11.3814900478873,6.24526444844865,8.88940112092552,10.09893954027,8.7992632751668,7.0589254118245,9.97031693167812
|phase1_expression=4.00372117761985,12.563114675017,10.9199817453489,12.7034968748869,11.520601788766,5.70789524500425,6.07392865548367,8.13476937681931,9.714421828465,7.95819389494778,8.90333434772626,11.1681022593471,13.353656934634,11.1023911072127,4.66353666541928,9.71881283471165,6.99561878128147,17.3504190947031,15.4939309974485,11.0341309467488,6.80346321208558,7.74469419366905,4.96279599363977,5.27974995218242,5.04700418347774,7.46501553349526,6.8921919385452,6.46413698057667,3.80046838912748,4.03248207615889,4.6563407237614,3.81018404075779,4.92051830067656,0,5.19932915552294,3.65716219788683,5.71674197534634,25.5304294749514,10.9386948233332,27.2232346866375,28.2351114254887,18.442228093878,25.7320487106511,4.90997590104751,4.76471576731718,7.15832333430558,0.782391344348039,1.09012578190223,0.878744730937887,0.58328969722285,1.53985063787899,0,14.4293041209653,7.97898356212479,10.0828139742739,4.3734104126111,5.15760191889762,5.67239301505187,2.63011399117477,2.64495489636016,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,2.8419204597844,0.299600110518405,0.384218305321555,4.14758449233911,3.91517221161903,4.6271491497304,1.14260393761521,1.10434270475807,3.30725157880376,5.36734637702124,4.5960939330501,1.10115880999389,5.74593021383345,4.14737639791857,2.50583946687368,3.56801810049398,2.6045668527838,0.558365998002762,5.06486349028512,4.12555268997387,4.12480019663135,5.97961059356232,5.77838282058432,6.73963120665338,6.57472572929034,16.232411367294,5.16254326188832,1.3599426674155,3.2382191498269,6.49776417447669,4.92829575807069,7.3031098468511,4.4311883870295,2.07828803682295,1.7666978725517,5.0703631119605,5.13305909657271,0,0,4.11332977921307,4.05375784760158,4.04419556011827,7.53613606145796,38.8406825470758,10.5393918736026,8.50078101154066,4.87144765299426,7.84092690670599,6.63179618431539,12.6995803706561,6.03199638382442,8.89901883843746,9.83275627055399,11.4999371753484,13.7501822455298,12.5879665522424,15.0311328471919,9.31958806090611,10.5401086924157,9.84399522023239,8.43008282188352,10.4239158320151,4.19931911695385,7.11593271609162,6.74057877321702,7.32000964509802,7.413606774659,6.43149984711423,10.7400492078739,5.61027720310812,7.30085683804909,7.12875546952214,10.5745925018579,4.0435641349388,9.6803253707778,12.1012011955314,5.9774547152703,10.4436035287103,14.9197769657358,12.654788842147,18.4483757210184,14.6174690313177,12.1590584247337,9.91612767491074,12.6701073712439,13.3722854364601,7.89104636739269,15.2925987074079,10.447564995665,14.610531684964,10.9468846750171,4.91549231119264,5.91900186363845,7.10408748488982,12.2204205795946,12.4298811789981,11.884096056427,10.6535131013345,14.1670246858131,13.2669717083145,15.3472403535269,11.8040296615832,13.778310399326,13.000228143165,12.9692296622485,11.6739085746032,11.1111990443253,11.6361561104257,11.8101648509127,7.99101804543684,7.20332286654991,12.5559137533843,8.72686869989696,13.4371597837197,14.3986736553472,9.92279452180119,10.8909103296605,6.89371935919098,6.84812254005213,8.0669940462567,6.25856027951241,8.04272668160862,8.15721535368718,11.5028811400281,8.08937467788799,10.59076444386,12.5459002150251,3.79335801906163,14.3953125888258,10.1436962105772,13.8482902934814,10.861339281387,14.6583863570766,9.54871710576285,10.3327103585722,9.73392112616524,8.14421281883883,9.19003143970162,10.0107063429656,9.82794975566015,12.367416181167,9.12870546248263,13.0235666266305,9.93040821947537,8.0554918486227,9.40384315295205,6.31491250332587,12.9391385874619,8.55924179637558,9.36113019343682,9.09283960609602,8.96987067609561,6.75420929908714,11.0851914099963,8.33762211790133,15.3187077855504,11.2031756611624,16.1936271319066,16.7506257441816,12.8543566078447,10.3420833364633,15.4482441224067,14.8381342064679,16.2643864030637,14.7476983244164,15.1962784041988,16.6346417368738,6.03165135757089,4.35124547054968,14.2611639175521,11.5893433447988,5.77982123956051,6.32943107597897,4.59017847054691,8.58401152494868,6.62567260774139,9.37052986311932,7.97066571611356,7.16906393857656,7.79795359288379,7.92614286208731,7.2865926301481,6.42962887404886,5.53402889125133,10.9249247583414,11.3552068166615,5.52003371368491,7.65568708961808,10.7230579932148,14.6019652173959,8.98288353773431,6.65111825322452,5.84675747243284,3.2483208216885,9.83792473420568,8.5281336745513,13.4507479906677,9.26893183800275,12.3254335594968,6.32511651449993,9.28219889233682,8.85142974959849,11.1637878299412,2.19909762430683,9.00215547132688,7.44828981297549,6.0645397984704,9.87294123612726,3.95804433848979,10.560226862867,6.56679419677843,6.83638033970382,14.3451040059088,14.6932628293274,17.7319999288778,13.0115854963419,12.9671310798598,9.03590593552537,8.90041449650446,7.86006051670122,7.84270098260245,14.4451731348375,11.6788443342908,17.6335553760122,13.4979122191848,11.0485979496006,9.93655311497972,10.6413979829406,1.90934123603023,8.85740782027179,12.4024874947378,11.9885928312199,10.4544148007234,11.7915784422936,10.3845546716312,9.75310777558964,6.80565449158477,8.94343315713371,10.5627683224777,3.38215763210514,11.5127740453864,7.61109056102649,8.16694991045,11.1077448190849,10.3063236549375,11.8530811032212,13.4110516389269,11.2199498535511,12.0792060413003,9.21696020025169,13.9044893076398,6.08175645870493,8.52500944468066,9.87398254631242,11.2786818270513,17.4839592207513,16.8273629327956,15.6550898805052,20.1932899896295,18.061013177235,17.7454085840839,18.8093709827722,21.3590288441531,22.7909959254059,10.6563280299149,5.32766288097755,6.72853924571068,4.02923079273788,8.69353173144857,10.1348536743638,12.2711588259068,12.2189976075068,11.5361583928134,9.60078132449013,5.52390283808612,7.44764167471216,4.1244763762485,7.53590771747707,3.7769694869485,9.45031500324528,8.55610286126019,10.4222754066367,6.73088405277366,7.26511433089237,16.3600198094423,9.56108192223151,10.4535888339366,5.65955539095552,4.77993121970037,11.3345831178824,10.7138229764225,9.94849549734627,11.3713745293709,9.88569269571935,11.6948331659367,13.4843770756631,14.7898102055248,15.7947539627936,10.9547548995107,10.8931266388164,12.5390993301408,9.47797571847605,12.3647092912894,10.6289468239479,10.8260241757196,14.7830437767339,7.55801366488108,12.3283288344083,9.7306799075428,9.3293266165114,11.3119975918272,13.1729990430486,7.85599180320834,10.5585166130515,11.4265199555654,8.18462086339379,11.3103894065755,11.3814900478873,6.24526444844865,8.88940112092552,10.09893954027,8.7992632751668,7.0589254118245,9.97031693167812
|short_description=p1@Zfp407
|short_description=p1@Zfp407
}}
}}

Revision as of 10:03, 18 April 2012

Short description:p1@Zfp407
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfp407_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000125763, NM_001033341, uc008fuo.2_5end
EntrezGene:Zfp407
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Zfp407

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.72
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.49
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.03
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H425.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.43
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D96.74
Mouse Schwann, donor2.CNhs12573.11746-123F96.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H938.84
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C112.70
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H19.83
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F513.75
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D56.43
cortex, neonate N30.CNhs11107.1392-42F210.74
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.57
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D414.92
eyeball, neonate N00.CNhs11207.633-15C612.65
eyeball, neonate N01.CNhs11140.1532-43E718.45
eyeball, neonate N02.CNhs11205.1551-44G814.62
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H212.67
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C410.45
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I610.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E912.22
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I911.88
heart, embryo E14.CNhs10597.403-26D410.65
heart, embryo E15.CNhs11017.431-16C814.17
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G311.80
heart, neonate N00.CNhs11213.639-21E313.78
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G112.97
heart, neonate N16.CNhs11209.782-15G111.67
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D211.81
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I513.44
intestine, embryo E13.CNhs11010.381-16D514.40
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F28.16
intestine, neonate N10.CNhs11098.755-23A511.50
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E310.59
intestine, neonate N30.CNhs11131.1384-42G112.55
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F814.40
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C710.86
kidney, neonate N00.CNhs11214.646-21G714.66
kidney, neonate N10.CNhs11206.758-6D59.55
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H18.14
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H69.83
liver, embryo E14.CNhs10594.409-16E112.37
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F49.40
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H18.97
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B111.09
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F815.32
lung, embryo E15.CNhs11020.432-17C511.20
lung, embryo E16.CNhs10998.458-17B616.19
lung, embryo E17.CNhs10605.480-44A616.75
lung, embryo E18.CNhs10583.1287-20I612.85
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E515.45
lung, neonate N07.CNhs11111.715-19A314.84
lung, neonate N10.CNhs11219.750-23E616.26
lung, neonate N20.CNhs11109.822-18A414.75
lung, neonate N25.CNhs11119.1359-25C715.20
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.97
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I711.36
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D713.45
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E611.16
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C314.35
skin, neonate N00.CNhs11124.650-25G414.69
skin, neonate N03.CNhs11215.662-22H317.73
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C412.97
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F214.45
spleen, neonate N10.CNhs11116.752-24D111.68
spleen, neonate N20.CNhs11112.824-19H117.63
spleen, neonate N25.CNhs11099.1354-25G313.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G812.40
stomach, embryo E16.CNhs11022.459-17D411.99
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A99.75
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I18.94
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F511.51
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I511.11
testis, embryo E18.CNhs11027.503-18G510.31
testis, neonate N00.CNhs11189.1300-22B711.85
testis, neonate N07.CNhs11222.726-26I413.41
testis, neonate N10.CNhs11204.763-44D911.22
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B513.90
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C59.87
thymus, embryo E17.CNhs10581.478-18C111.28
thymus, embryo E18.CNhs10595.1273-19G417.48
thymus, neonate N02.CNhs11181.1541-43F816.83
thymus, neonate N03.CNhs11137.2104-43C715.66
thymus, neonate N06.CNhs11197.681-26C420.19
thymus, neonate N07.CNhs11211.713-19D318.06
thymus, neonate N10.CNhs11194.748-24E417.75
thymus, neonate N20.CNhs11186.820-7A218.81
thymus, neonate N25.CNhs11125.1362-25G721.36
thymus, neonate N30.CNhs11132.1393-42G222.79
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.03
urinary bladder, adult.CNhs10481.879-12E48.69
uterus, adult pregnant day19.CNhs10497.590-15F510.13
uterus, adult.CNhs10509.92-27E512.27
vagina, adult.CNhs10502.89-27D512.22
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I87.27
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D210.45
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.37
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F911.38
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.