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FFCP PHASE1:Mm9::chr3:105604241..105604295,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:105604241..105604295,-
|short_description=p1@Rap1a
|description=CAGE_peak_1_at_Rap1a_5end
|association_with_transcript=0bp_to_ENSMUST00000090678,NM_145541,uc008qve.1_5end
|EntrezGene=109905
|EntrezGene=109905
|HGNC=
|HGNC=
|UniProt=P62835,Q52L50
|UniProt=P62835,Q52L50
|association_with_transcript=0bp_to_ENSMUST00000090678,NM_145541,uc008qve.1_5end
|description=CAGE_peak_1_at_Rap1a_5end
|id=chr3:105604241..105604295,-
|ontology_enrichment_disease=
|phase1_expression=41.6387002472464,78.8684421264956,73.7098767811048,75.9185170380143,69.6245064625423,53.385608467981,47.4233660408917,56.9433856377351,118.684892773855,121.479489161115,58.7277631013482,56.6382328866888,57.3522445269539,59.9703960594322,78.2807940266807,83.2173348972185,116.127271769272,60.7264668314608,67.186072466812,57.7169926445321,38.0143506975282,57.5887516965135,48.8443605689809,59.0372040107671,48.8641768673072,76.9470831914127,83.1370652587014,65.934197201882,81.9000937856972,76.1130991874991,70.2885718777316,13.9706748161119,15.9916844771988,15.8481681015439,30.0405684541326,38.5664377231702,26.9503550266327,184.572449154976,217.99256112214,215.691782517205,192.351696586142,198.766236122908,248.095790398919,33.8662440354303,34.5695335458545,29.1839335937074,19.559783608701,20.2763395433815,24.8245386489953,28.1923353657711,34.8566189847153,17.2503077237966,67.2808250291523,73.9869384851571,66.8826660293503,48.364773974758,47.5645510298336,51.0515371354668,17.601532094785,12.1667925232568,12.0427966666174,16.6033820713875,19.5644855144451,23.8473425079571,13.8441290759376,15.6305625288142,12.583204641773,13.4476406862544,25.403955015577,20.9259204414121,24.1873705554089,35.9920240348793,32.9094126017904,23.885705846916,18.2106394934649,17.4651569455904,37.4393995397922,48.1381264581158,42.5490097119794,21.761237475482,18.5719916512892,21.8783615633839,35.4562408731754,35.4540444319958,40.3387374130779,43.3104020646292,39.5793272621506,34.4838974776806,53.084061526562,57.5855288013706,42.0303508617433,65.3922146505854,59.1575060325743,71.2408212961919,67.5767474145576,80.6448396775204,59.2675452955993,58.968891612008,45.2027648008992,48.0541821334063,52.9571258360319,19.2489716121477,17.8363667794652,0,29.6592726185363,25.589346412985,36.3977600410644,73.5344185390746,121.441867430524,75.2601645058662,46.3205822465583,51.1502003564397,60.1906447838313,67.9759108892328,64.9089663389091,94.3756100885863,46.4726539340623,67.094101610839,87.5764446430376,75.8686526253349,84.8031430887911,88.2472960706104,54.0536107532554,37.7687228144896,39.3759808809296,61.3096932500619,55.1149572727233,61.789981292321,53.6236358248333,46.7346794943047,34.312545211397,34.8062555352634,39.1104720432622,47.3073596061111,39.687516510876,48.185655131124,53.5675053852664,76.1370660133769,37.6556910066175,70.4980217219688,23.5518001762494,35.8647282916218,33.6716182736003,35.7170418270645,39.5292060069215,37.537320043461,42.6342846746766,52.5167842600202,19.8322553498215,30.0678667466833,24.9850596312807,28.2762494831572,33.6437171562973,44.9245294813595,46.9183271010111,40.8020246977911,89.8832879760941,56.1018437510079,59.95849837247,33.9686266958223,45.0290035163705,45.3756394881757,41.667073462997,45.2557733019029,50.4453459141727,50.9249339003393,43.4602910267383,59.5503246072564,60.8871444679878,75.0245310841465,72.3944469244492,77.6321933228515,87.8200461164203,78.1081357185364,50.4695876553905,44.4547925478509,76.3267388692573,59.2369269326339,32.2065258308203,44.5894409972042,41.366455084392,45.3787930402521,52.2588403035445,55.5458828248673,69.2812429854987,55.9976446061637,71.3791992992765,61.2785933886745,66.2877896205008,55.7268033365617,76.0805935558924,80.6522156680187,14.2250925714811,42.8431922286483,37.1935527721165,41.9521735361347,41.5058322538719,41.3801337352879,60.7703121764113,55.2061953443712,67.038456788267,61.9453762887439,75.8918725343101,50.8877572434087,64.6679093922438,75.5536697613109,75.6668252779116,82.4825886353266,85.8089120503385,55.5253545280065,60.8007100406383,71.1114060157131,96.3246983733275,74.0560485860322,70.8325517970053,81.8355564548642,72.1177602358087,92.1467125804031,89.9748036111365,34.6769283539987,39.1115943460862,44.3034673873241,47.1727399059889,59.96724016417,51.417426431379,65.7600393280782,101.674667948493,87.4785524112661,90.0919442914802,100.284348606032,110.345703412307,111.813722283508,54.284862218138,52.2149456465961,58.5199484892653,56.2910962461654,56.0321559057394,72.3196106273894,46.2296545962225,78.0135165061512,61.5241027861701,57.0040566673092,59.6722811719853,77.6648593345794,80.2075226696619,76.1475867821959,61.9360373562588,57.2821481506171,61.6648933596577,53.33933852602,48.4015690560196,25.4633813244175,46.9114442938299,45.3667838174472,50.4431525691859,38.844901784797,44.7438864307832,53.752447730431,24.8053590019849,56.5680672216827,63.5733601193824,68.344341141771,65.5955176227887,58.7828369760618,61.1427929734993,52.5991270565753,35.405718998394,29.8901416091975,14.6175312674513,32.579229324802,36.0000674293815,29.7875925395458,39.491764944509,14.0053876592716,45.2916396562961,59.9484760544611,104.530460678052,35.9452031412427,52.6374031028652,50.7231698645791,44.2871396251636,41.3635067357554,69.6639199545343,63.7863038916153,92.9537591540319,43.5476291402399,67.2256134352053,107.181652035669,87.6209999691771,121.938766319077,39.4349957585744,52.3418431690481,51.5485902290501,98.3310736555567,25.623215480072,51.8464641173464,58.4308893845945,53.3175154836895,55.6824537552753,76.1983557074237,72.4044272153943,85.5941930287777,71.1586203371943,52.1925022993018,14.6560164057889,39.4723681556104,33.2571565818766,42.3903590590024,34.3565130450765,42.0700752472038,42.7180348670544,44.9205127711628,38.3785200598102,28.9900944991207,35.4276907697175,83.1109247252109,40.1395926274525,46.0145088098426,52.4880124830292,51.3806616565672,57.4189115317856,60.2179202095044,66.7556662829089,63.9117628171774,68.3575055695349,70.6791557809252,64.9069485726751,71.1005509722035,66.0354497325865,47.159919791964,24.4184548711471,18.1221990351141,38.445577147374,78.2417855830371,65.5011839324625,48.5351804308252,37.5144663388365,69.7185224609155,44.6153955667483,46.4928488872249,37.2382083735608,31.9646919159259,28.773465830367,33.2373314851468,35.1011700120539,34.2244114450408,24.9228324941313,36.2432218226274,34.4573993979467,29.5278406316763,34.6589219680892,50.5661971502052,55.5474880964153,43.5709115026533,45.5605791993311,50.684624080768,50.7052351155068,50.5394423527595,47.9075876792553,55.0788916847343,49.9109234814473,52.3725746671831,54.6211309767882,49.0582502021566,50.4096817860121,57.8727661391115,51.9228235012166,46.662057682604,45.2587413148748,47.9184676630211,47.9256741794115,44.9120427393895,51.7601592284318,55.8456412085065,49.5734806485214,54.9815696905092,52.5561920583485,44.3302394609613,55.0466484096168,52.4043846237998,46.2431078781749,54.2278944150881,44.5614271366437,21.2338991247254,47.7220481228633,47.7013739987222,51.0739846623812,56.2508118754765,80.9218746315271
|phase1_expression=41.6387002472464,78.8684421264956,73.7098767811048,75.9185170380143,69.6245064625423,53.385608467981,47.4233660408917,56.9433856377351,118.684892773855,121.479489161115,58.7277631013482,56.6382328866888,57.3522445269539,59.9703960594322,78.2807940266807,83.2173348972185,116.127271769272,60.7264668314608,67.186072466812,57.7169926445321,38.0143506975282,57.5887516965135,48.8443605689809,59.0372040107671,48.8641768673072,76.9470831914127,83.1370652587014,65.934197201882,81.9000937856972,76.1130991874991,70.2885718777316,13.9706748161119,15.9916844771988,15.8481681015439,30.0405684541326,38.5664377231702,26.9503550266327,184.572449154976,217.99256112214,215.691782517205,192.351696586142,198.766236122908,248.095790398919,33.8662440354303,34.5695335458545,29.1839335937074,19.559783608701,20.2763395433815,24.8245386489953,28.1923353657711,34.8566189847153,17.2503077237966,67.2808250291523,73.9869384851571,66.8826660293503,48.364773974758,47.5645510298336,51.0515371354668,17.601532094785,12.1667925232568,12.0427966666174,16.6033820713875,19.5644855144451,23.8473425079571,13.8441290759376,15.6305625288142,12.583204641773,13.4476406862544,25.403955015577,20.9259204414121,24.1873705554089,35.9920240348793,32.9094126017904,23.885705846916,18.2106394934649,17.4651569455904,37.4393995397922,48.1381264581158,42.5490097119794,21.761237475482,18.5719916512892,21.8783615633839,35.4562408731754,35.4540444319958,40.3387374130779,43.3104020646292,39.5793272621506,34.4838974776806,53.084061526562,57.5855288013706,42.0303508617433,65.3922146505854,59.1575060325743,71.2408212961919,67.5767474145576,80.6448396775204,59.2675452955993,58.968891612008,45.2027648008992,48.0541821334063,52.9571258360319,19.2489716121477,17.8363667794652,0,29.6592726185363,25.589346412985,36.3977600410644,73.5344185390746,121.441867430524,75.2601645058662,46.3205822465583,51.1502003564397,60.1906447838313,67.9759108892328,64.9089663389091,94.3756100885863,46.4726539340623,67.094101610839,87.5764446430376,75.8686526253349,84.8031430887911,88.2472960706104,54.0536107532554,37.7687228144896,39.3759808809296,61.3096932500619,55.1149572727233,61.789981292321,53.6236358248333,46.7346794943047,34.312545211397,34.8062555352634,39.1104720432622,47.3073596061111,39.687516510876,48.185655131124,53.5675053852664,76.1370660133769,37.6556910066175,70.4980217219688,23.5518001762494,35.8647282916218,33.6716182736003,35.7170418270645,39.5292060069215,37.537320043461,42.6342846746766,52.5167842600202,19.8322553498215,30.0678667466833,24.9850596312807,28.2762494831572,33.6437171562973,44.9245294813595,46.9183271010111,40.8020246977911,89.8832879760941,56.1018437510079,59.95849837247,33.9686266958223,45.0290035163705,45.3756394881757,41.667073462997,45.2557733019029,50.4453459141727,50.9249339003393,43.4602910267383,59.5503246072564,60.8871444679878,75.0245310841465,72.3944469244492,77.6321933228515,87.8200461164203,78.1081357185364,50.4695876553905,44.4547925478509,76.3267388692573,59.2369269326339,32.2065258308203,44.5894409972042,41.366455084392,45.3787930402521,52.2588403035445,55.5458828248673,69.2812429854987,55.9976446061637,71.3791992992765,61.2785933886745,66.2877896205008,55.7268033365617,76.0805935558924,80.6522156680187,14.2250925714811,42.8431922286483,37.1935527721165,41.9521735361347,41.5058322538719,41.3801337352879,60.7703121764113,55.2061953443712,67.038456788267,61.9453762887439,75.8918725343101,50.8877572434087,64.6679093922438,75.5536697613109,75.6668252779116,82.4825886353266,85.8089120503385,55.5253545280065,60.8007100406383,71.1114060157131,96.3246983733275,74.0560485860322,70.8325517970053,81.8355564548642,72.1177602358087,92.1467125804031,89.9748036111365,34.6769283539987,39.1115943460862,44.3034673873241,47.1727399059889,59.96724016417,51.417426431379,65.7600393280782,101.674667948493,87.4785524112661,90.0919442914802,100.284348606032,110.345703412307,111.813722283508,54.284862218138,52.2149456465961,58.5199484892653,56.2910962461654,56.0321559057394,72.3196106273894,46.2296545962225,78.0135165061512,61.5241027861701,57.0040566673092,59.6722811719853,77.6648593345794,80.2075226696619,76.1475867821959,61.9360373562588,57.2821481506171,61.6648933596577,53.33933852602,48.4015690560196,25.4633813244175,46.9114442938299,45.3667838174472,50.4431525691859,38.844901784797,44.7438864307832,53.752447730431,24.8053590019849,56.5680672216827,63.5733601193824,68.344341141771,65.5955176227887,58.7828369760618,61.1427929734993,52.5991270565753,35.405718998394,29.8901416091975,14.6175312674513,32.579229324802,36.0000674293815,29.7875925395458,39.491764944509,14.0053876592716,45.2916396562961,59.9484760544611,104.530460678052,35.9452031412427,52.6374031028652,50.7231698645791,44.2871396251636,41.3635067357554,69.6639199545343,63.7863038916153,92.9537591540319,43.5476291402399,67.2256134352053,107.181652035669,87.6209999691771,121.938766319077,39.4349957585744,52.3418431690481,51.5485902290501,98.3310736555567,25.623215480072,51.8464641173464,58.4308893845945,53.3175154836895,55.6824537552753,76.1983557074237,72.4044272153943,85.5941930287777,71.1586203371943,52.1925022993018,14.6560164057889,39.4723681556104,33.2571565818766,42.3903590590024,34.3565130450765,42.0700752472038,42.7180348670544,44.9205127711628,38.3785200598102,28.9900944991207,35.4276907697175,83.1109247252109,40.1395926274525,46.0145088098426,52.4880124830292,51.3806616565672,57.4189115317856,60.2179202095044,66.7556662829089,63.9117628171774,68.3575055695349,70.6791557809252,64.9069485726751,71.1005509722035,66.0354497325865,47.159919791964,24.4184548711471,18.1221990351141,38.445577147374,78.2417855830371,65.5011839324625,48.5351804308252,37.5144663388365,69.7185224609155,44.6153955667483,46.4928488872249,37.2382083735608,31.9646919159259,28.773465830367,33.2373314851468,35.1011700120539,34.2244114450408,24.9228324941313,36.2432218226274,34.4573993979467,29.5278406316763,34.6589219680892,50.5661971502052,55.5474880964153,43.5709115026533,45.5605791993311,50.684624080768,50.7052351155068,50.5394423527595,47.9075876792553,55.0788916847343,49.9109234814473,52.3725746671831,54.6211309767882,49.0582502021566,50.4096817860121,57.8727661391115,51.9228235012166,46.662057682604,45.2587413148748,47.9184676630211,47.9256741794115,44.9120427393895,51.7601592284318,55.8456412085065,49.5734806485214,54.9815696905092,52.5561920583485,44.3302394609613,55.0466484096168,52.4043846237998,46.2431078781749,54.2278944150881,44.5614271366437,21.2338991247254,47.7220481228633,47.7013739987222,51.0739846623812,56.2508118754765,80.9218746315271
|short_description=p1@Rap1a
}}
}}

Revision as of 11:23, 18 April 2012

Short description:p1@Rap1a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rap1a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000090678, NM_145541, uc008qve.1_5end
EntrezGene:Rap1a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rap1a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I578.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I673.71
CD326+ enterocyte, pool1.CNhs13542.11848-124I375.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I469.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I753.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.42
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E956.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7118.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2121.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E658.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F156.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E457.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E859.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A178.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A383.22
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5116.13
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A260.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A467.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A657.72
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H257.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I948.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D159.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D248.86
GP2+ M cell, pool1.CNhs13228.11845-124H976.95
GP2+ M cell, pool2.CNhs13231.11846-124I183.14
GP2+ M cell, pool3.CNhs13240.11847-124I265.93
Ileum epithelium, pool1.CNhs13199.10252-104B981.90
Ileum epithelium, pool2.CNhs13232.10253-104C176.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C870.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F530.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.57
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8184.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1217.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3215.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9192.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2198.77
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4248.10
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D833.87
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D934.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C417.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A267.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I973.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A166.88
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C148.36
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E147.56
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C551.05
Mouse Granule cells, donor1.CNhs12131.11713-123C317.60
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D119.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D215.63
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D525.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.93
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F135.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.21
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F348.14
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D421.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.88
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E435.46
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E535.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.58
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.48
Mouse Schwann, donor1.CNhs12507.11728-123D953.08
Mouse Schwann, donor2.CNhs12573.11746-123F957.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G342.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F765.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C459.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C871.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F467.58
Mouse hepatocyte, donor8.CNhs13091.11824-124F680.64
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A759.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I758.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E345.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I848.05
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G652.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.40
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B673.53
accessory axillary lymph node, adult.CNhs10475.1063-29H9121.44
adrenal gland, adult.CNhs10508.49-24D775.26
adrenal gland, embryo E14.CNhs11038.406-44C546.32
adrenal gland, embryo E16.CNhs11004.1254-43D651.15
adrenal gland, embryo E17.CNhs11043.1263-45I160.19
adrenal gland, embryo E18.CNhs11026.1262-18F567.98
adrenal gland, neonate N00.CNhs11191.1311-23C164.91
adrenal gland, neonate N25.CNhs11223.1377-27I394.38
amnion, adult pregnant day17.5.CNhs10488.583-22A846.47
aorta, adult.CNhs10498.46-23H167.09
bone (os femoris), adult.CNhs10483.56-12G287.58
bone (os femoris), neonate N02.CNhs11227.1985-43F575.87
bone (os femoris), neonate N16.CNhs11225.1525-43A684.80
bone (os femoris), neonate N20.CNhs11195.1350-25C388.25
cecum, adult.CNhs10467.37-13H454.05
cerebellum, adult.CNhs10494.15-8B237.77
cerebellum, neonate N30.CNhs11135.1395-42I239.38
colon, adult.CNhs10468.36-18H761.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C755.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D161.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D453.62
corpora quadrigemina, adult.CNhs10501.16-22A446.73
corpus striatum, adult.CNhs10487.19-21D834.31
corpus striatum, neonate N00.CNhs11226.630-43F134.81
cortex, adult.CNhs10473.12-14D539.11
cortex, neonate N30.CNhs11107.1392-42F247.31
diencephalon, adult.CNhs10482.20-12F239.69
diencephalon, neonate N30.CNhs11201.1388-42B248.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B153.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A276.14
epididymis, adult.CNhs10490.58-23B237.66
eyeball, adult.CNhs10484.31-12G470.50
eyeball, embryo E12.CNhs11016.345-16C623.55
eyeball, embryo E14.CNhs10521.399-16E235.86
eyeball, embryo E15.CNhs10593.426-16C933.67
eyeball, embryo E17.CNhs11023.1261-18D435.72
eyeball, neonate N00.CNhs11207.633-15C639.53
eyeball, neonate N01.CNhs11140.1532-43E737.54
eyeball, neonate N02.CNhs11205.1551-44G842.63
eyeball, neonate N16.CNhs11188.777-19A252.52
forelimb, embryo E11.CNhs10596.335-25E219.83
forelimb, embryo E12.CNhs10600.359-14H230.07
forelimb, embryo E13.CNhs10589.384-1E224.99
forelimb, embryo E14.CNhs10577.413-26A828.28
forelimb, embryo E15.CNhs11007.437-20E733.64
forelimb, embryo E17.CNhs10598.1517-43C444.92
forelimb, embryo E18.CNhs11008.1520-43B546.92
gonad, embryo E13.CNhs11044.1564-45I640.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C889.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D256.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D559.96
heart, embryo E11.CNhs10586.331-24E933.97
heart, embryo E12.CNhs11015.353-12F545.03
heart, embryo E13.CNhs11013.376-3I945.38
heart, embryo E14.CNhs10597.403-26D441.67
heart, embryo E15.CNhs11017.431-16C845.26
heart, embryo E16.CNhs11021.457-17C650.45
heart, embryo E17.CNhs11025.479-18E550.92
heart, embryo E18.CNhs11030.1283-20G343.46
heart, neonate N00.CNhs11213.639-21E359.55
heart, neonate N03.CNhs11221.1349-25I260.89
heart, neonate N10.CNhs11118.749-24G175.02
heart, neonate N16.CNhs11209.782-15G172.39
heart, neonate N20.CNhs11127.821-26I677.63
heart, neonate N25.CNhs11196.1351-25D387.82
heart, neonate N30.CNhs11202.1390-42D278.11
hippocampus, adult.CNhs10478.13-16E850.47
hippocampus, neonate N00.CNhs11228.627-43G144.45
intestinal mucosa, adult.CNhs10506.860-29I376.33
intestine, adult.CNhs10496.178-9A359.24
intestine, embryo E12.CNhs11019.1251-16I532.21
intestine, embryo E13.CNhs11010.381-16D544.59
intestine, embryo E15.CNhs10602.976-16D841.37
intestine, embryo E16.CNhs10585.463-22H445.38
intestine, embryo E17.CNhs10582.482-18D352.26
intestine, embryo E18.CNhs10526.1289-20F755.55
intestine, neonate N00.CNhs11126.644-26D169.28
intestine, neonate N01.CNhs11192.1322-23E956.00
intestine, neonate N06.CNhs11102.688-20B871.38
intestine, neonate N07.CNhs11095.720-20F261.28
intestine, neonate N10.CNhs11098.755-23A566.29
intestine, neonate N20.CNhs11187.827-18D155.73
intestine, neonate N25.CNhs11121.1352-25E376.08
intestine, neonate N30.CNhs11131.1384-42G180.65
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F842.84
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I241.95
kidney, embryo E18.CNhs11001.1288-20C741.51
kidney, neonate N00.CNhs11214.646-21G741.38
kidney, neonate N10.CNhs11206.758-6D560.77
kidney, neonate N20.CNhs11113.832-19I155.21
kidney, neonate N25.CNhs11122.1353-25F367.04
kidney, neonate N30.CNhs11203.1385-42H161.95
liver, adult pregnant day01.CNhs10466.508-5B275.89
liver, embryo E12.CNhs10601.355-15F850.89
liver, embryo E13.CNhs10524.378-3H664.67
liver, embryo E14.CNhs10594.409-16E175.55
liver, embryo E15.CNhs10520.433-16D775.67
liver, embryo E16.CNhs10523.462-17F582.48
liver, embryo E17.CNhs10510.481-18A385.81
liver, embryo E18.CNhs10579.499-43G455.53
liver, neonate N00.CNhs11117.641-24F460.80
liver, neonate N03.CNhs11123.1345-25G271.11
liver, neonate N06.CNhs11101.684-20A896.32
liver, neonate N07.CNhs11103.716-20H274.06
liver, neonate N10.CNhs11115.751-24B970.83
liver, neonate N20.CNhs11220.823-25A381.84
liver, neonate N25.CNhs11198.1368-26H172.12
liver, neonate N30.CNhs11106.1382-42D192.15
lung, adult.CNhs10474.28-22B189.97
lung, embryo E12.CNhs10522.354-16G234.68
lung, embryo E14.CNhs10604.404-26F839.11
lung, embryo E15.CNhs11020.432-17C544.30
lung, embryo E16.CNhs10998.458-17B647.17
lung, embryo E17.CNhs10605.480-44A659.97
lung, embryo E18.CNhs10583.1287-20I651.42
lung, neonate N00.CNhs11224.640-42C665.76
lung, neonate N06.CNhs11212.683-20E5101.67
lung, neonate N07.CNhs11111.715-19A387.48
lung, neonate N10.CNhs11219.750-23E690.09
lung, neonate N20.CNhs11109.822-18A4100.28
lung, neonate N25.CNhs11119.1359-25C7110.35
lung, neonate N30.CNhs11133.1394-42H2111.81
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A154.28
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A152.21
mammary gland, adult lactating day02.CNhs10480.595-22B658.52
mammary gland, adult pregnant day19.CNhs10476.588-5H256.29
medulla oblongata, adult.CNhs10477.17-12C256.03
medulla oblongata, neonate N30.CNhs11200.1396-42A372.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C746.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C278.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E161.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E257.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E359.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D777.66
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D880.21
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D976.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D461.94
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D557.28
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D661.66
olfactory brain, adult.CNhs10489.18-22I953.34
ovary, adult.CNhs10507.91-2I748.40
ovary, embryo E18.CNhs11040.505-44H725.46
ovary, neonate N00.CNhs11217.1299-22I446.91
oviduct, adult pregnant day01.CNhs10500.988-6G645.37
pancreas, adult.CNhs10486.34-16E450.44
pancreas, embryo E14.CNhs11012.405-44F438.84
pancreas, embryo E15.CNhs11042.1556-45F244.74
pancreas, embryo E16.CNhs11003.460-26E553.75
pancreas, embryo E17.CNhs10599.1558-45G324.81
pancreas, embryo E18.CNhs10580.1535-43I756.57
pancreas, neonate N00.CNhs11105.645-26G963.57
pancreas, neonate N01.CNhs11138.1531-43D768.34
pancreas, neonate N02.CNhs11139.1539-43D865.60
pancreas, neonate N16.CNhs11136.787-43B658.78
pancreas, neonate N25.CNhs11094.1555-45E261.14
pancreas, neonate N30.CNhs11182.1548-44H552.60
pituitary gland, adult.CNhs10493.21-1G835.41
pituitary gland, embryo E12.CNhs11018.346-16E629.89
pituitary gland, embryo E13.CNhs11009.370-44C714.62
pituitary gland, embryo E14.CNhs11037.398-44A532.58
pituitary gland, embryo E15.CNhs10592.427-16B936.00
pituitary gland, embryo E16.CNhs11036.449-43F629.79
pituitary gland, embryo E17.CNhs11039.1265-44F539.49
pituitary gland, neonate N00.CNhs11190.1308-22E914.01
placenta, adult pregnant day10.CNhs10472.539-13I745.29
placenta, adult pregnant day17.CNhs10464.577-18G359.95
prostate, adult.CNhs10470.859-1F8104.53
skin, adult.CNhs10492.30-1C335.95
skin, neonate N00.CNhs11124.650-25G452.64
skin, neonate N03.CNhs11215.662-22H350.72
skin, neonate N06.CNhs11097.693-20I544.29
skin, neonate N10.CNhs11108.762-6C441.36
small intestine, neonate N16.CNhs11114.790-21I169.66
spinal cord, adult.CNhs10505.24-13C963.79
spleen, adult.CNhs10465.25-2G292.95
spleen, embryo E16.CNhs11035.461-43C143.55
spleen, embryo E18.CNhs11011.1271-21F267.23
spleen, neonate N10.CNhs11116.752-24D1107.18
spleen, neonate N20.CNhs11112.824-19H187.62
spleen, neonate N25.CNhs11099.1354-25G3121.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C639.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C952.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.55
stomach, adult.CNhs10503.33-1H698.33
stomach, embryo E12.CNhs10588.356-43E325.62
stomach, embryo E15.CNhs10603.1252-16G851.85
stomach, embryo E16.CNhs11022.459-17D458.43
stomach, embryo E17.CNhs11006.1035-18D553.32
stomach, embryo E18.CNhs10999.1286-20C655.68
stomach, neonate N03.CNhs11193.1340-24B876.20
stomach, neonate N07.CNhs11210.718-18A972.40
stomach, neonate N25.CNhs11104.1355-25E485.59
stomach, neonate N30.CNhs11134.1386-42I171.16
submandibular gland, adult.CNhs10469.59-29C152.19
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F539.47
testis, embryo E15.CNhs11034.443-27C533.26
testis, embryo E16.CNhs11033.470-26G542.39
testis, embryo E17.CNhs11029.486-18I534.36
testis, embryo E18.CNhs11027.503-18G542.07
testis, neonate N00.CNhs11189.1300-22B742.72
testis, neonate N07.CNhs11222.726-26I444.92
testis, neonate N10.CNhs11204.763-44D938.38
testis, neonate N20.CNhs11110.839-18H328.99
testis, neonate N30.CNhs11130.1391-42E235.43
thymus, adult.CNhs10471.38-12B583.11
thymus, embryo E14.CNhs11041.402-44I440.14
thymus, embryo E15.CNhs11005.430-45I246.01
thymus, embryo E16.CNhs11002.456-26C552.49
thymus, embryo E17.CNhs10581.478-18C151.38
thymus, embryo E18.CNhs10595.1273-19G457.42
thymus, neonate N02.CNhs11181.1541-43F860.22
thymus, neonate N03.CNhs11137.2104-43C766.76
thymus, neonate N06.CNhs11197.681-26C463.91
thymus, neonate N07.CNhs11211.713-19D368.36
thymus, neonate N10.CNhs11194.748-24E470.68
thymus, neonate N20.CNhs11186.820-7A264.91
thymus, neonate N25.CNhs11125.1362-25G771.10
thymus, neonate N30.CNhs11132.1393-42G266.04
tongue, adult.CNhs10499.32-1B447.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H324.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.12
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G538.45
urinary bladder, adult.CNhs10481.879-12E478.24
uterus, adult pregnant day19.CNhs10497.590-15F565.50
uterus, adult.CNhs10509.92-27E548.54
vagina, adult.CNhs10502.89-27D537.51
vesicular gland, adult.CNhs10491.51-27F869.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.24
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.96
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.92
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A936.24
whole body, embryo E11.CNhs11014.324-5I834.46
whole body, embryo E12.CNhs10587.857-27C929.53
whole body, embryo E13.CNhs10512.372-23H234.66
whole body, embryo E14.5.CNhs10578.420-27D250.57
whole body, embryo E14.CNhs10519.395-14B155.55
whole body, embryo E16.CNhs10514.453-14F243.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G545.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G550.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G550.71
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G550.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G555.08
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G549.91
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G552.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G554.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G549.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G550.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G557.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G551.92
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G546.66
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G545.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G547.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G547.93
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G544.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G551.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G555.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G549.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G554.98
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G552.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G544.33
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G555.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G552.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G546.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G554.23
whole body, embryo E17.5.CNhs10513.490-9F944.56
whole body, embryo E17.CNhs10517.475-3I521.23
whole body, embryo E18.CNhs10516.493-3B347.72
whole body, neonate N00.CNhs10525.657-19C247.70
whole body, neonate N01.CNhs10576.659-23C651.07
whole body, neonate N06.CNhs10515.692-21D156.25
whole body, neonate N10.CNhs10518.761-6B480.92





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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