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FFCP PHASE1:Mm9::chr3:107434599..107434623,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:107434599..107434623,-
|short_description=p1@Fam40a
|description=CAGE_peak_1_at_Fam40a_5end
|association_with_transcript=4bp_to_ENSMUST00000064759,ENSMUST00000106707,NM_153563,uc008qxg.2,uc008qxh.2_5end
|EntrezGene=229707
|EntrezGene=229707
|HGNC=
|HGNC=
|UniProt=Q8C079,Q3UGC1
|UniProt=Q8C079,Q3UGC1
|association_with_transcript=4bp_to_ENSMUST00000064759,ENSMUST00000106707,NM_153563,uc008qxg.2,uc008qxh.2_5end
|description=CAGE_peak_1_at_Fam40a_5end
|id=chr3:107434599..107434623,-
|ontology_enrichment_disease=
|phase1_expression=39.8770629290937,35.2465161715755,42.3149292632269,39.0178832585811,36.064492556137,29.5467518564926,21.4923629347884,32.6682008307188,41.5326730347417,51.0260667381946,17.977886663678,18.267824409932,25.6801094896809,28.3242103837552,10.3264026162855,11.7435655086099,11.8925519281785,31.861678701182,28.5198021899937,30.1316652776601,21.6009956983717,17.5744983625567,14.1047886135025,21.2789922315231,17.2056960800378,31.0085260622111,33.1686737042488,29.9505013433386,21.2826229791139,26.7151937545527,22.3947815761858,15.2407361630311,12.916360539276,15.8481681015439,28.3074587356249,24.6027275130569,26.9503550266327,65.2909343949576,45.3174499823804,32.4584721263755,56.4702228509774,60.7910481613017,50.0075663622088,24.8016731411887,22.4043017995127,21.2914232507551,30.5132624295735,28.9973457985994,41.0813161713462,38.3026901176338,25.8974880006921,63.2511283205875,25.1673909086605,34.8173828165445,26.5514101322547,25.4686841675588,23.2092086350393,25.2679325215947,123.008408202635,115.320033481303,122.963292280199,29.1406297579454,28.4574334755565,30.1466405289269,25.7105254267413,29.1296847127901,37.1504137042822,24.974189845901,80.2557599267617,91.3990202505546,85.1816093473097,64.5571224752596,60.5179802207421,81.4563814779444,87.3152240976133,101.114066527102,34.1359231098105,39.0723254540674,34.715076515911,123.973110466382,111.797900482145,116.684595004714,36.8521558681823,39.9561453122493,46.4506673241503,66.8806889025226,64.2096280403954,98.2325079499334,19.6130840732947,22.6714680320357,21.7398366526258,10.3250865237766,13.599426674155,13.4925797909454,27.9403859502498,11.6486990645307,20.0835520788405,14.827438064291,13.2490862347463,13.7802434059033,32.8165168079666,19.2489716121477,35.6727335589304,42.6640021891999,19.0512116089868,21.7889484308585,16.1767822404731,15.4148237620731,19.9382170408322,22.4147629987885,28.2781082628801,25.5751001782199,23.522780720118,18.0867168663147,20.5780237487483,21.9916534826932,40.0455847729686,26.0278842455841,16.8076004870476,27.662131341007,20.5382612168166,19.3950101254089,14.9113408974498,31.9131068742586,35.8153868651008,28.6111901833622,13.0598485711453,13.7977628128484,15.2484272487678,39.2451475240635,24.2475319493872,75.8952286761701,37.5460531615317,44.4944895754775,34.0772393077679,28.2299797737898,23.830411140974,24.010545327748,23.2504937758981,19.3606507415556,44.1108301643566,38.8534556492569,43.7550975426999,36.470565916243,45.3123084347843,47.0177353445399,44.1335122676323,32.337921342377,45.053710522964,40.4687011559133,42.5801720476756,29.5914238777226,25.0242524303038,30.9944428204728,24.4880742325453,26.4715574868596,10.5331978096985,14.6688307055388,17.6181369625267,31.0688658803253,23.4526059981096,26.1089989118472,29.5930919481513,23.2181793461937,26.9967447552912,26.0438018120457,28.4369805483596,26.6224980597146,29.78533283434,24.7892870759434,24.8881245305777,25.0001978497318,21.0768110679409,22.4124719329821,45.0020489927232,77.075554672084,35.3548097792664,29.3540128996534,30.5002198265385,22.2947204986021,24.7425525738419,21.176770085451,24.016828735246,20.7345932462689,25.6245693234036,22.5637567971895,21.8661631656234,22.48208134065,19.3014446247929,23.3693046250098,20.533114738096,27.4814957091027,26.3638382324784,25.9344123624084,25.9227792048085,28.7148372261893,27.9291581521381,28.1244637760177,27.3181840376791,21.1082511610831,18.3688511574409,21.3477093584715,15.7119892356189,12.0128476115588,11.7935397067922,9.44420872016386,16.4316698324687,16.4000468631643,16.2960545140109,12.6586300478357,11.5116011010275,14.5517548989683,24.4405951096503,13.0249331683976,17.78614736753,19.4485736019276,11.8402292924462,16.8855232477179,18.8448253969937,29.3711688244251,34.5485750057095,31.2330957826346,26.9893785531777,26.4659886758069,25.2326259339175,35.1240566144038,28.847231371433,34.3270268955601,32.5287728061274,25.8904037250866,25.5573773161525,22.8545512558788,16.5870412333199,16.86107619838,21.1458637398186,23.4546234359023,34.6789274373631,30.3578268273806,30.0000950039316,32.0638077549554,32.1818383804582,28.8924670779512,40.2841753760334,37.0401636826456,34.9793918309359,35.6676428793929,37.2425845540903,34.1939353756235,49.0156844653689,39.2012006034605,21.2910127812403,28.1343653794263,27.2021222120472,28.7048013972212,9.2921596837974,29.1336763385978,25.9998258989686,18.2946927363221,23.9194533233426,16.2940628410282,22.4832615056352,23.6296924160379,19.6073558111597,12.3254335594968,23.1920938864997,16.5016869197099,20.7668159509811,41.0539294391387,42.170930913178,35.5799478152443,33.1626236911052,32.2847559859748,32.2516080380157,39.5804433848979,22.7631556821799,30.5038182043901,21.8323114074412,29.6795255294664,29.5479900853507,29.010516890443,30.4399477207998,25.7701212599746,25.6503136234269,31.8931519458077,16.7453463181896,29.9260958546673,21.2973706475168,13.7508973613424,13.5327285443815,19.6749228957609,24.4768939191152,23.0919896334036,29.2983944465378,22.9120948323627,29.5774153998362,26.0248917922366,24.3012016849053,25.5087721137652,23.5831568845872,22.1177528071106,24.1348090717981,24.8668144884828,26.0526096316504,23.6108938973032,15.7834022831573,27.3615279260481,27.135192434964,33.4456043951762,27.381882577279,20.4436911843842,25.5838780247744,26.5616945081658,19.9232754408851,18.6019773036025,19.5860404255349,26.2289230121388,26.1515527724312,20.9530352616248,17.1495486330689,18.7978030450856,23.245718509408,23.5583081059139,21.4149814403137,22.2126189885925,27.7392776224199,23.1900225814733,24.7543017078971,27.3241630258536,32.258025002113,28.1145675682862,18.8688060367955,16.9559188991909,16.1169231709515,22.2168033137019,20.0820248732765,30.5863212526333,38.5863082342319,21.0660283694853,44.6153955667483,36.8260189205741,42.9671635079547,37.8077001156113,30.8287133896789,33.9927253825365,42.5264175146038,37.3766598676103,41.2359592175626,47.1161883694156,38.4013186061454,42.6956614539103,48.31761042842,25.0399918580343,33.7477191831052,36.7687016900028,27.3363475195987,27.196627555534,35.6220322646915,34.1141235881127,31.9383917861702,26.4076877940507,28.654301285784,31.3723246783859,28.0859443192949,31.9116773159659,33.4905701980632,32.6016582583662,36.6756451714943,25.0238164228475,33.2583174813853,26.0889435054226,27.4201618439419,30.2320546595243,30.5855486349824,29.1074251147367,27.8050518766614,30.2530168153519,33.6794202337737,29.7405403978601,32.1500899116512,31.816947807307,29.0554040650479,31.2972419195651,32.9870304777752,50.961357899341,30.8789723147939,32.6604002153413,30.0322681348084,24.4856475222662,24.1142549045238
|phase1_expression=39.8770629290937,35.2465161715755,42.3149292632269,39.0178832585811,36.064492556137,29.5467518564926,21.4923629347884,32.6682008307188,41.5326730347417,51.0260667381946,17.977886663678,18.267824409932,25.6801094896809,28.3242103837552,10.3264026162855,11.7435655086099,11.8925519281785,31.861678701182,28.5198021899937,30.1316652776601,21.6009956983717,17.5744983625567,14.1047886135025,21.2789922315231,17.2056960800378,31.0085260622111,33.1686737042488,29.9505013433386,21.2826229791139,26.7151937545527,22.3947815761858,15.2407361630311,12.916360539276,15.8481681015439,28.3074587356249,24.6027275130569,26.9503550266327,65.2909343949576,45.3174499823804,32.4584721263755,56.4702228509774,60.7910481613017,50.0075663622088,24.8016731411887,22.4043017995127,21.2914232507551,30.5132624295735,28.9973457985994,41.0813161713462,38.3026901176338,25.8974880006921,63.2511283205875,25.1673909086605,34.8173828165445,26.5514101322547,25.4686841675588,23.2092086350393,25.2679325215947,123.008408202635,115.320033481303,122.963292280199,29.1406297579454,28.4574334755565,30.1466405289269,25.7105254267413,29.1296847127901,37.1504137042822,24.974189845901,80.2557599267617,91.3990202505546,85.1816093473097,64.5571224752596,60.5179802207421,81.4563814779444,87.3152240976133,101.114066527102,34.1359231098105,39.0723254540674,34.715076515911,123.973110466382,111.797900482145,116.684595004714,36.8521558681823,39.9561453122493,46.4506673241503,66.8806889025226,64.2096280403954,98.2325079499334,19.6130840732947,22.6714680320357,21.7398366526258,10.3250865237766,13.599426674155,13.4925797909454,27.9403859502498,11.6486990645307,20.0835520788405,14.827438064291,13.2490862347463,13.7802434059033,32.8165168079666,19.2489716121477,35.6727335589304,42.6640021891999,19.0512116089868,21.7889484308585,16.1767822404731,15.4148237620731,19.9382170408322,22.4147629987885,28.2781082628801,25.5751001782199,23.522780720118,18.0867168663147,20.5780237487483,21.9916534826932,40.0455847729686,26.0278842455841,16.8076004870476,27.662131341007,20.5382612168166,19.3950101254089,14.9113408974498,31.9131068742586,35.8153868651008,28.6111901833622,13.0598485711453,13.7977628128484,15.2484272487678,39.2451475240635,24.2475319493872,75.8952286761701,37.5460531615317,44.4944895754775,34.0772393077679,28.2299797737898,23.830411140974,24.010545327748,23.2504937758981,19.3606507415556,44.1108301643566,38.8534556492569,43.7550975426999,36.470565916243,45.3123084347843,47.0177353445399,44.1335122676323,32.337921342377,45.053710522964,40.4687011559133,42.5801720476756,29.5914238777226,25.0242524303038,30.9944428204728,24.4880742325453,26.4715574868596,10.5331978096985,14.6688307055388,17.6181369625267,31.0688658803253,23.4526059981096,26.1089989118472,29.5930919481513,23.2181793461937,26.9967447552912,26.0438018120457,28.4369805483596,26.6224980597146,29.78533283434,24.7892870759434,24.8881245305777,25.0001978497318,21.0768110679409,22.4124719329821,45.0020489927232,77.075554672084,35.3548097792664,29.3540128996534,30.5002198265385,22.2947204986021,24.7425525738419,21.176770085451,24.016828735246,20.7345932462689,25.6245693234036,22.5637567971895,21.8661631656234,22.48208134065,19.3014446247929,23.3693046250098,20.533114738096,27.4814957091027,26.3638382324784,25.9344123624084,25.9227792048085,28.7148372261893,27.9291581521381,28.1244637760177,27.3181840376791,21.1082511610831,18.3688511574409,21.3477093584715,15.7119892356189,12.0128476115588,11.7935397067922,9.44420872016386,16.4316698324687,16.4000468631643,16.2960545140109,12.6586300478357,11.5116011010275,14.5517548989683,24.4405951096503,13.0249331683976,17.78614736753,19.4485736019276,11.8402292924462,16.8855232477179,18.8448253969937,29.3711688244251,34.5485750057095,31.2330957826346,26.9893785531777,26.4659886758069,25.2326259339175,35.1240566144038,28.847231371433,34.3270268955601,32.5287728061274,25.8904037250866,25.5573773161525,22.8545512558788,16.5870412333199,16.86107619838,21.1458637398186,23.4546234359023,34.6789274373631,30.3578268273806,30.0000950039316,32.0638077549554,32.1818383804582,28.8924670779512,40.2841753760334,37.0401636826456,34.9793918309359,35.6676428793929,37.2425845540903,34.1939353756235,49.0156844653689,39.2012006034605,21.2910127812403,28.1343653794263,27.2021222120472,28.7048013972212,9.2921596837974,29.1336763385978,25.9998258989686,18.2946927363221,23.9194533233426,16.2940628410282,22.4832615056352,23.6296924160379,19.6073558111597,12.3254335594968,23.1920938864997,16.5016869197099,20.7668159509811,41.0539294391387,42.170930913178,35.5799478152443,33.1626236911052,32.2847559859748,32.2516080380157,39.5804433848979,22.7631556821799,30.5038182043901,21.8323114074412,29.6795255294664,29.5479900853507,29.010516890443,30.4399477207998,25.7701212599746,25.6503136234269,31.8931519458077,16.7453463181896,29.9260958546673,21.2973706475168,13.7508973613424,13.5327285443815,19.6749228957609,24.4768939191152,23.0919896334036,29.2983944465378,22.9120948323627,29.5774153998362,26.0248917922366,24.3012016849053,25.5087721137652,23.5831568845872,22.1177528071106,24.1348090717981,24.8668144884828,26.0526096316504,23.6108938973032,15.7834022831573,27.3615279260481,27.135192434964,33.4456043951762,27.381882577279,20.4436911843842,25.5838780247744,26.5616945081658,19.9232754408851,18.6019773036025,19.5860404255349,26.2289230121388,26.1515527724312,20.9530352616248,17.1495486330689,18.7978030450856,23.245718509408,23.5583081059139,21.4149814403137,22.2126189885925,27.7392776224199,23.1900225814733,24.7543017078971,27.3241630258536,32.258025002113,28.1145675682862,18.8688060367955,16.9559188991909,16.1169231709515,22.2168033137019,20.0820248732765,30.5863212526333,38.5863082342319,21.0660283694853,44.6153955667483,36.8260189205741,42.9671635079547,37.8077001156113,30.8287133896789,33.9927253825365,42.5264175146038,37.3766598676103,41.2359592175626,47.1161883694156,38.4013186061454,42.6956614539103,48.31761042842,25.0399918580343,33.7477191831052,36.7687016900028,27.3363475195987,27.196627555534,35.6220322646915,34.1141235881127,31.9383917861702,26.4076877940507,28.654301285784,31.3723246783859,28.0859443192949,31.9116773159659,33.4905701980632,32.6016582583662,36.6756451714943,25.0238164228475,33.2583174813853,26.0889435054226,27.4201618439419,30.2320546595243,30.5855486349824,29.1074251147367,27.8050518766614,30.2530168153519,33.6794202337737,29.7405403978601,32.1500899116512,31.816947807307,29.0554040650479,31.2972419195651,32.9870304777752,50.961357899341,30.8789723147939,32.6604002153413,30.0322681348084,24.4856475222662,24.1142549045238
|short_description=p1@Fam40a
}}
}}

Revision as of 11:28, 18 April 2012

Short description:p1@Fam40a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam40a_5end
Coexpression cluster:NA
Association with transcript: 4bp_to_ENSMUST00000064759, ENSMUST00000106707, NM_153563, uc008qxg.2, uc008qxh.2_5end
EntrezGene:Fam40a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam40a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I535.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I642.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I339.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I436.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.49
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F251.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A231.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I914.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.21
GP2+ M cell, pool1.CNhs13228.11845-124H931.01
GP2+ M cell, pool2.CNhs13231.11846-124I133.17
GP2+ M cell, pool3.CNhs13240.11847-124I229.95
Ileum epithelium, pool1.CNhs13199.10252-104B921.28
Ileum epithelium, pool2.CNhs13232.10253-104C126.72
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.60
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F726.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G865.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H145.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H332.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G956.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H260.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D922.40
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B730.51
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C229.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B841.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C338.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.90
Mouse Astrocytes, donor3.CNhs12107.11633-122C463.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A225.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I934.82
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A126.55
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.47
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E123.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C3123.01
Mouse Granule cells, donor2.CNhs12357.11731-123E3115.32
Mouse Granule cells, donor3.CNhs12108.11636-122C7122.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C629.14
Mouse Meningeal cells, donor3.CNhs12109.11639-122D128.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D229.13
Mouse Microglia, donor1.CNhs12629.11718-123C837.15
Mouse Microglia, donor2.CNhs12634.11736-123E824.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D580.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F591.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D985.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F164.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D560.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D281.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F287.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6101.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4123.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4111.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8116.68
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.85
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D666.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E198.23
Mouse Schwann, donor1.CNhs12507.11728-123D919.61
Mouse Schwann, donor2.CNhs12573.11746-123F922.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I714.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E313.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I835.67
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.18
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.41
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D722.41
adrenal gland, embryo E14.CNhs11038.406-44C528.28
adrenal gland, embryo E16.CNhs11004.1254-43D625.58
adrenal gland, embryo E17.CNhs11043.1263-45I123.52
adrenal gland, embryo E18.CNhs11026.1262-18F518.09
adrenal gland, neonate N00.CNhs11191.1311-23C120.58
adrenal gland, neonate N25.CNhs11223.1377-27I321.99
amnion, adult pregnant day17.5.CNhs10488.583-22A840.05
aorta, adult.CNhs10498.46-23H126.03
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F527.66
bone (os femoris), neonate N16.CNhs11225.1525-43A620.54
bone (os femoris), neonate N20.CNhs11195.1350-25C319.40
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B231.91
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H728.61
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.25
corpora quadrigemina, adult.CNhs10501.16-22A439.25
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F175.90
cortex, adult.CNhs10473.12-14D537.55
cortex, neonate N30.CNhs11107.1392-42F244.49
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B228.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B123.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.01
epididymis, adult.CNhs10490.58-23B223.25
eyeball, adult.CNhs10484.31-12G419.36
eyeball, embryo E12.CNhs11016.345-16C644.11
eyeball, embryo E14.CNhs10521.399-16E238.85
eyeball, embryo E15.CNhs10593.426-16C943.76
eyeball, embryo E17.CNhs11023.1261-18D436.47
eyeball, neonate N00.CNhs11207.633-15C645.31
eyeball, neonate N01.CNhs11140.1532-43E747.02
eyeball, neonate N02.CNhs11205.1551-44G844.13
eyeball, neonate N16.CNhs11188.777-19A232.34
forelimb, embryo E11.CNhs10596.335-25E245.05
forelimb, embryo E12.CNhs10600.359-14H240.47
forelimb, embryo E13.CNhs10589.384-1E242.58
forelimb, embryo E14.CNhs10577.413-26A829.59
forelimb, embryo E15.CNhs11007.437-20E725.02
forelimb, embryo E17.CNhs10598.1517-43C430.99
forelimb, embryo E18.CNhs11008.1520-43B524.49
gonad, embryo E13.CNhs11044.1564-45I626.47
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.62
heart, embryo E11.CNhs10586.331-24E931.07
heart, embryo E12.CNhs11015.353-12F523.45
heart, embryo E13.CNhs11013.376-3I926.11
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C823.22
heart, embryo E16.CNhs11021.457-17C627.00
heart, embryo E17.CNhs11025.479-18E526.04
heart, embryo E18.CNhs11030.1283-20G328.44
heart, neonate N00.CNhs11213.639-21E326.62
heart, neonate N03.CNhs11221.1349-25I229.79
heart, neonate N10.CNhs11118.749-24G124.79
heart, neonate N16.CNhs11209.782-15G124.89
heart, neonate N20.CNhs11127.821-26I625.00
heart, neonate N25.CNhs11196.1351-25D321.08
heart, neonate N30.CNhs11202.1390-42D222.41
hippocampus, adult.CNhs10478.13-16E845.00
hippocampus, neonate N00.CNhs11228.627-43G177.08
intestinal mucosa, adult.CNhs10506.860-29I335.35
intestine, adult.CNhs10496.178-9A329.35
intestine, embryo E12.CNhs11019.1251-16I530.50
intestine, embryo E13.CNhs11010.381-16D522.29
intestine, embryo E15.CNhs10602.976-16D824.74
intestine, embryo E16.CNhs10585.463-22H421.18
intestine, embryo E17.CNhs10582.482-18D324.02
intestine, embryo E18.CNhs10526.1289-20F720.73
intestine, neonate N00.CNhs11126.644-26D125.62
intestine, neonate N01.CNhs11192.1322-23E922.56
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F222.48
intestine, neonate N10.CNhs11098.755-23A519.30
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E320.53
intestine, neonate N30.CNhs11131.1384-42G127.48
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F825.93
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I228.71
kidney, embryo E18.CNhs11001.1288-20C727.93
kidney, neonate N00.CNhs11214.646-21G728.12
kidney, neonate N10.CNhs11206.758-6D527.32
kidney, neonate N20.CNhs11113.832-19I121.11
kidney, neonate N25.CNhs11122.1353-25F318.37
kidney, neonate N30.CNhs11203.1385-42H121.35
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F812.01
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D716.43
liver, embryo E16.CNhs10523.462-17F516.40
liver, embryo E17.CNhs10510.481-18A316.30
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F411.51
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H213.02
liver, neonate N10.CNhs11115.751-24B917.79
liver, neonate N20.CNhs11220.823-25A319.45
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B118.84
lung, embryo E12.CNhs10522.354-16G229.37
lung, embryo E14.CNhs10604.404-26F834.55
lung, embryo E15.CNhs11020.432-17C531.23
lung, embryo E16.CNhs10998.458-17B626.99
lung, embryo E17.CNhs10605.480-44A626.47
lung, embryo E18.CNhs10583.1287-20I625.23
lung, neonate N00.CNhs11224.640-42C635.12
lung, neonate N06.CNhs11212.683-20E528.85
lung, neonate N07.CNhs11111.715-19A334.33
lung, neonate N10.CNhs11219.750-23E632.53
lung, neonate N20.CNhs11109.822-18A425.89
lung, neonate N25.CNhs11119.1359-25C725.56
lung, neonate N30.CNhs11133.1394-42H222.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B621.15
mammary gland, adult pregnant day19.CNhs10476.588-5H223.45
medulla oblongata, adult.CNhs10477.17-12C234.68
medulla oblongata, neonate N30.CNhs11200.1396-42A330.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.89
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E340.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D737.04
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.98
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D437.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D649.02
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I721.29
ovary, embryo E18.CNhs11040.505-44H728.13
ovary, neonate N00.CNhs11217.1299-22I427.20
oviduct, adult pregnant day01.CNhs10500.988-6G628.70
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F429.13
pancreas, embryo E15.CNhs11042.1556-45F226.00
pancreas, embryo E16.CNhs11003.460-26E518.29
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D723.63
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E641.05
pituitary gland, embryo E13.CNhs11009.370-44C742.17
pituitary gland, embryo E14.CNhs11037.398-44A535.58
pituitary gland, embryo E15.CNhs10592.427-16B933.16
pituitary gland, embryo E16.CNhs11036.449-43F632.28
pituitary gland, embryo E17.CNhs11039.1265-44F532.25
pituitary gland, neonate N00.CNhs11190.1308-22E939.58
placenta, adult pregnant day10.CNhs10472.539-13I722.76
placenta, adult pregnant day17.CNhs10464.577-18G330.50
prostate, adult.CNhs10470.859-1F821.83
skin, adult.CNhs10492.30-1C329.68
skin, neonate N00.CNhs11124.650-25G429.55
skin, neonate N03.CNhs11215.662-22H329.01
skin, neonate N06.CNhs11097.693-20I530.44
skin, neonate N10.CNhs11108.762-6C425.77
small intestine, neonate N16.CNhs11114.790-21I125.65
spinal cord, adult.CNhs10505.24-13C931.89
spleen, adult.CNhs10465.25-2G216.75
spleen, embryo E16.CNhs11035.461-43C129.93
spleen, embryo E18.CNhs11011.1271-21F221.30
spleen, neonate N10.CNhs11116.752-24D113.75
spleen, neonate N20.CNhs11112.824-19H113.53
spleen, neonate N25.CNhs11099.1354-25G319.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.30
stomach, adult.CNhs10503.33-1H622.91
stomach, embryo E12.CNhs10588.356-43E329.58
stomach, embryo E15.CNhs10603.1252-16G826.02
stomach, embryo E16.CNhs11022.459-17D424.30
stomach, embryo E17.CNhs11006.1035-18D525.51
stomach, embryo E18.CNhs10999.1286-20C623.58
stomach, neonate N03.CNhs11193.1340-24B822.12
stomach, neonate N07.CNhs11210.718-18A924.13
stomach, neonate N25.CNhs11104.1355-25E424.87
stomach, neonate N30.CNhs11134.1386-42I126.05
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F527.36
testis, embryo E15.CNhs11034.443-27C527.14
testis, embryo E16.CNhs11033.470-26G533.45
testis, embryo E17.CNhs11029.486-18I527.38
testis, embryo E18.CNhs11027.503-18G520.44
testis, neonate N00.CNhs11189.1300-22B725.58
testis, neonate N07.CNhs11222.726-26I426.56
testis, neonate N10.CNhs11204.763-44D919.92
testis, neonate N20.CNhs11110.839-18H318.60
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B526.23
thymus, embryo E14.CNhs11041.402-44I426.15
thymus, embryo E15.CNhs11005.430-45I220.95
thymus, embryo E16.CNhs11002.456-26C517.15
thymus, embryo E17.CNhs10581.478-18C118.80
thymus, embryo E18.CNhs10595.1273-19G423.25
thymus, neonate N02.CNhs11181.1541-43F823.56
thymus, neonate N03.CNhs11137.2104-43C721.41
thymus, neonate N06.CNhs11197.681-26C422.21
thymus, neonate N07.CNhs11211.713-19D327.74
thymus, neonate N10.CNhs11194.748-24E423.19
thymus, neonate N20.CNhs11186.820-7A224.75
thymus, neonate N25.CNhs11125.1362-25G727.32
thymus, neonate N30.CNhs11132.1393-42G232.26
tongue, adult.CNhs10499.32-1B428.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.12
urinary bladder, adult.CNhs10481.879-12E422.22
uterus, adult pregnant day19.CNhs10497.590-15F520.08
uterus, adult.CNhs10509.92-27E530.59
vagina, adult.CNhs10502.89-27D538.59
vesicular gland, adult.CNhs10491.51-27F821.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A342.97
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D737.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A642.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A737.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A841.24
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.12
whole body, embryo E11.CNhs11014.324-5I838.40
whole body, embryo E12.CNhs10587.857-27C942.70
whole body, embryo E13.CNhs10512.372-23H248.32
whole body, embryo E14.5.CNhs10578.420-27D225.04
whole body, embryo E14.CNhs10519.395-14B133.75
whole body, embryo E16.CNhs10514.453-14F236.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.62
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G532.60
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G536.68
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.82
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.30
whole body, embryo E17.5.CNhs10513.490-9F932.99
whole body, embryo E17.CNhs10517.475-3I550.96
whole body, embryo E18.CNhs10516.493-3B330.88
whole body, neonate N00.CNhs10525.657-19C232.66
whole body, neonate N01.CNhs10576.659-23C630.03
whole body, neonate N06.CNhs10515.692-21D124.49
whole body, neonate N10.CNhs10518.761-6B424.11





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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