Personal tools

FFCP PHASE1:Mm9::chr1:167391466..167391477,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Brp44_5end
|description=CAGE_peak_3_at_Brp44_5end
|id=chr1:167391466..167391477,+
|id=chr1:167391466..167391477,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=0.960893082628764,5.58360652222978,7.73498706962211,6.35174843744343,6.51164448930251,4.19698179779725,6.77476657727024,4.77756296733832,0.563154888606667,1.87251621057595,2.22583358693156,1.19658238493005,5.47842335779858,3.4968160967599,2.6648780945253,1.82227740650843,2.09868563438444,2.83915948822414,3.42786084014347,2.12194825899015,2.72138528483423,4.46809280403984,3.91799683708403,7.1996590257033,6.8822784320151,14.9300310669905,11.1998119001359,8.61884930743556,12.1614988452079,8.56902441183765,6.65191531965914,0,0,0,4.91047753577167,6.15068187826422,5.71674197534634,8.78916424547506,9.37602413428561,10.470474879476,18.2351761289614,10.2456822743767,15.5363312969969,5.28766635497425,3.95370031756107,2.75320128242522,1.56478268869608,1.52617609466313,1.09843091367236,1.36100929351998,0.979904951377538,1.43752564364972,2.51673909086605,2.90144856804538,4.36921938885203,6.68874533693462,2.29226751951005,5.67239301505187,1.01158230429799,2.64495489636016,0.633831403506179,3.72728985276045,1.77858959222228,1.3498495759221,2.96659908770092,2.1314403448383,2.99600110518405,1.15265491596466,0.414758449233911,0.405017814995072,0.210324961351382,2.28520787523043,2.87129103237098,0.489963196859816,0.287536413054709,0,1.10115880999389,1.78762273319263,2.4577045320999,0.527545150920775,0.548925861614458,0.52091337055676,3.07101298901519,2.25105044012672,1.83357897332172,2.06240009831567,1.42371680799103,1.1183966749518,1.4387976733305,0.68014404096107,1.15945795480671,23.2314446784974,14.9593693415705,17.2705021324101,19.4932925234301,14.7848872742121,11.0951091904084,6.13549161281008,9.87186817490901,8.12681021373782,1.26759077799012,8.98285341900225,0,0,4.5463118612355,4.05375784760158,2.02209778005913,10.0481814152773,2.33044095282455,3.26572705942614,1.38788261412909,1.52232739156071,2.30615497256059,3.01445281105245,2.23418543557839,5.02666365318702,2.71914464507811,4.33798070759735,8.84610551949874,4.04417124868523,7.50861162765338,3.39412677194655,3.72783522436244,0.585561594023094,0.83778682725382,2.81002760729451,3.23500836165985,10.7982491578813,4.19331749341113,1.9472783122627,1.37250180845588,1.13088916901578,1.21677024134594,1.79000820131231,3.32460871295296,2.27137768294861,0.81471491080253,4.72746488318353,9.09801930361229,6.52369753248069,1.17108398666433,0.919608417733892,0.720248519221397,1.65775299619287,1.29269348387523,1.66547836370305,1.78033276663485,7.24369438069244,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,1.02891068203972,0.59710280045548,3.51106593656617,5.40430604940902,3.12579849335152,2.48550927042602,4.45599513964083,7.38254451990161,3.55117103377815,7.28027657465394,8.17615698303105,10.9290954032692,12.0723030629829,13.8950757416932,14.1521470925593,20.685100473966,22.7803354823855,34.0645970701024,30.0783657948739,34.0884303651344,0.841159794256509,0.411618449517138,5.28670052774077,2.64450566663544,0.213288250535234,0.696710015581316,0.77320476793256,1.00841762311671,1.11189021922435,1.90225626112559,1.42358718463353,3.78807595865225,4.27269854960458,3.58121649674071,2.9244613067868,2.69645822596266,4.97117514711797,5.97423819763102,1.51734320762465,0.342745537829186,1.1270773567308,2.24016460629846,2.13347735884388,4.48869247298039,4.23684798732524,6.34723636312289,6.12295038581362,11.8461277364928,17.4907049981418,0.83422552858047,1.37591296579242,0.899448449539415,2.23146133527353,2.65294875727659,4.83789118384698,2.87696137450811,7.7824908852017,13.1789478330279,7.18841032636773,11.9085103253921,14.0416952901552,17.6805214562978,16.1457672169721,22.1924019827149,1.66277871149944,0.947457058852424,0.325929952884052,0.678980343100753,0.234690248288502,1.84256883185997,2.85652369063216,3.70753930929818,2.52216230569906,1.7717175171902,1.59454768657487,2.13022309130459,3.7990696010497,2.60368305446721,0,0.54390568381871,9.83528546038072,9.93372286697037,2.0871576698413,3.7507739709505,0.491804836130026,19.9452032491455,1.26203287766503,1.95219372148319,1.29254038639679,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,1.18586333383957,1.60660658210904,0.709700426041343,0,1.14020871547503,0.494910368917606,5.30980553359851,2.42780636154981,2.41858845571801,3.39489143560617,1.47650946440386,1.84461088766356,3.35956781118687,3.99887102425256,4.27796854061666,3.47640433729398,5.27093042874994,3.09406629744561,3.40439605753788,0.720244376125241,1.16422815404479,0,0.886701168211368,0.891844088010353,0.987294123612726,1.8267896946876,0.938686832254841,2.1183207086382,1.7642271844397,4.45192882941996,2.9063596805263,2.5934557719107,2.38744688006273,4.26766339337159,2.33184669303881,1.48340241608408,2.56306321196779,1.23832120777933,1.29636169158798,2.63715839806567,1.50363650493128,2.28778173206523,5.09935289981566,3.77868921273877,3.73139929271944,4.77335309007557,0.316335993581135,1.62655573701479,1.83609079397062,1.67270636811575,2.18362563746178,1.48350781023303,3.05817786183743,3.40282724579238,4.01806417204558,8.07741107013003,0.56369293868419,0.448549638131936,0.496375471371293,1.16670713006429,1.6790777052105,1.01373675294467,1.29092962510329,1.69265700297135,1.15345278868282,0.241584120826006,3.16833006883652,4.10814456816632,2.02725215290164,2.05421914329655,3.37794139742267,1.61124026100733,1.39076948346885,3.60586348559907,3.98761723371358,4.13962444787405,3.73413352609499,3.7305688500631,4.28814675254911,6.15755786498109,4.09069157635491,15.1909357022192,2.66383144048878,4.03712354742641,4.53288464183012,1.73870634628971,2.25218970541418,0.73260649706906,2.35805216986972,3.51100472824754,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,3.10656187051092,0.93408612825759,0.399024873401031,0.853668028770671,1.45864030240976,0.838452650511929,2.5738091183002,2.00022055021454,1.64828045791115,1.28367683836726,1.51618327058278,2.78827229879264,1.50901073108861,1.591905626988,2.04880487695582,1.95280594449085,1.42888107384922,1.50649623728312,1.54327376370964,6.1812885120496,2.06078488188156,1.71434626192708,3.37204031702741,2.38436189947321,3.34296758254356,3.01150017329058,3.89227196301712,2.74391959309159,2.63069711437843,2.44447404922551,1.68342681497322,2.60997039873183,2.46261205938909,4.50154147486658,2.78886314134739,1.73615949883027,1.74867404556562,2.57324769289949,1.93383948643468,2.67803664896381,4.19123696327079,7.65163857547391
|phase1_expression=0.960893082628764,5.58360652222978,7.73498706962211,6.35174843744343,6.51164448930251,4.19698179779725,6.77476657727024,4.77756296733832,0.563154888606667,1.87251621057595,2.22583358693156,1.19658238493005,5.47842335779858,3.4968160967599,2.6648780945253,1.82227740650843,2.09868563438444,2.83915948822414,3.42786084014347,2.12194825899015,2.72138528483423,4.46809280403984,3.91799683708403,7.1996590257033,6.8822784320151,14.9300310669905,11.1998119001359,8.61884930743556,12.1614988452079,8.56902441183765,6.65191531965914,0,0,0,4.91047753577167,6.15068187826422,5.71674197534634,8.78916424547506,9.37602413428561,10.470474879476,18.2351761289614,10.2456822743767,15.5363312969969,5.28766635497425,3.95370031756107,2.75320128242522,1.56478268869608,1.52617609466313,1.09843091367236,1.36100929351998,0.979904951377538,1.43752564364972,2.51673909086605,2.90144856804538,4.36921938885203,6.68874533693462,2.29226751951005,5.67239301505187,1.01158230429799,2.64495489636016,0.633831403506179,3.72728985276045,1.77858959222228,1.3498495759221,2.96659908770092,2.1314403448383,2.99600110518405,1.15265491596466,0.414758449233911,0.405017814995072,0.210324961351382,2.28520787523043,2.87129103237098,0.489963196859816,0.287536413054709,0,1.10115880999389,1.78762273319263,2.4577045320999,0.527545150920775,0.548925861614458,0.52091337055676,3.07101298901519,2.25105044012672,1.83357897332172,2.06240009831567,1.42371680799103,1.1183966749518,1.4387976733305,0.68014404096107,1.15945795480671,23.2314446784974,14.9593693415705,17.2705021324101,19.4932925234301,14.7848872742121,11.0951091904084,6.13549161281008,9.87186817490901,8.12681021373782,1.26759077799012,8.98285341900225,0,0,4.5463118612355,4.05375784760158,2.02209778005913,10.0481814152773,2.33044095282455,3.26572705942614,1.38788261412909,1.52232739156071,2.30615497256059,3.01445281105245,2.23418543557839,5.02666365318702,2.71914464507811,4.33798070759735,8.84610551949874,4.04417124868523,7.50861162765338,3.39412677194655,3.72783522436244,0.585561594023094,0.83778682725382,2.81002760729451,3.23500836165985,10.7982491578813,4.19331749341113,1.9472783122627,1.37250180845588,1.13088916901578,1.21677024134594,1.79000820131231,3.32460871295296,2.27137768294861,0.81471491080253,4.72746488318353,9.09801930361229,6.52369753248069,1.17108398666433,0.919608417733892,0.720248519221397,1.65775299619287,1.29269348387523,1.66547836370305,1.78033276663485,7.24369438069244,0.646703978798527,0.189106080167819,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,1.02891068203972,0.59710280045548,3.51106593656617,5.40430604940902,3.12579849335152,2.48550927042602,4.45599513964083,7.38254451990161,3.55117103377815,7.28027657465394,8.17615698303105,10.9290954032692,12.0723030629829,13.8950757416932,14.1521470925593,20.685100473966,22.7803354823855,34.0645970701024,30.0783657948739,34.0884303651344,0.841159794256509,0.411618449517138,5.28670052774077,2.64450566663544,0.213288250535234,0.696710015581316,0.77320476793256,1.00841762311671,1.11189021922435,1.90225626112559,1.42358718463353,3.78807595865225,4.27269854960458,3.58121649674071,2.9244613067868,2.69645822596266,4.97117514711797,5.97423819763102,1.51734320762465,0.342745537829186,1.1270773567308,2.24016460629846,2.13347735884388,4.48869247298039,4.23684798732524,6.34723636312289,6.12295038581362,11.8461277364928,17.4907049981418,0.83422552858047,1.37591296579242,0.899448449539415,2.23146133527353,2.65294875727659,4.83789118384698,2.87696137450811,7.7824908852017,13.1789478330279,7.18841032636773,11.9085103253921,14.0416952901552,17.6805214562978,16.1457672169721,22.1924019827149,1.66277871149944,0.947457058852424,0.325929952884052,0.678980343100753,0.234690248288502,1.84256883185997,2.85652369063216,3.70753930929818,2.52216230569906,1.7717175171902,1.59454768657487,2.13022309130459,3.7990696010497,2.60368305446721,0,0.54390568381871,9.83528546038072,9.93372286697037,2.0871576698413,3.7507739709505,0.491804836130026,19.9452032491455,1.26203287766503,1.95219372148319,1.29254038639679,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,1.18586333383957,1.60660658210904,0.709700426041343,0,1.14020871547503,0.494910368917606,5.30980553359851,2.42780636154981,2.41858845571801,3.39489143560617,1.47650946440386,1.84461088766356,3.35956781118687,3.99887102425256,4.27796854061666,3.47640433729398,5.27093042874994,3.09406629744561,3.40439605753788,0.720244376125241,1.16422815404479,0,0.886701168211368,0.891844088010353,0.987294123612726,1.8267896946876,0.938686832254841,2.1183207086382,1.7642271844397,4.45192882941996,2.9063596805263,2.5934557719107,2.38744688006273,4.26766339337159,2.33184669303881,1.48340241608408,2.56306321196779,1.23832120777933,1.29636169158798,2.63715839806567,1.50363650493128,2.28778173206523,5.09935289981566,3.77868921273877,3.73139929271944,4.77335309007557,0.316335993581135,1.62655573701479,1.83609079397062,1.67270636811575,2.18362563746178,1.48350781023303,3.05817786183743,3.40282724579238,4.01806417204558,8.07741107013003,0.56369293868419,0.448549638131936,0.496375471371293,1.16670713006429,1.6790777052105,1.01373675294467,1.29092962510329,1.69265700297135,1.15345278868282,0.241584120826006,3.16833006883652,4.10814456816632,2.02725215290164,2.05421914329655,3.37794139742267,1.61124026100733,1.39076948346885,3.60586348559907,3.98761723371358,4.13962444787405,3.73413352609499,3.7305688500631,4.28814675254911,6.15755786498109,4.09069157635491,15.1909357022192,2.66383144048878,4.03712354742641,4.53288464183012,1.73870634628971,2.25218970541418,0.73260649706906,2.35805216986972,3.51100472824754,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,3.10656187051092,0.93408612825759,0.399024873401031,0.853668028770671,1.45864030240976,0.838452650511929,2.5738091183002,2.00022055021454,1.64828045791115,1.28367683836726,1.51618327058278,2.78827229879264,1.50901073108861,1.591905626988,2.04880487695582,1.95280594449085,1.42888107384922,1.50649623728312,1.54327376370964,6.1812885120496,2.06078488188156,1.71434626192708,3.37204031702741,2.38436189947321,3.34296758254356,3.01150017329058,3.89227196301712,2.74391959309159,2.63069711437843,2.44447404922551,1.68342681497322,2.60997039873183,2.46261205938909,4.50154147486658,2.78886314134739,1.73615949883027,1.74867404556562,2.57324769289949,1.93383948643468,2.67803664896381,4.19123696327079,7.65163857547391
|short_description=p3@Brp44
|short_description=p3@Brp44
}}
}}

Revision as of 12:39, 18 April 2012

Short description:p3@Brp44
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Brp44_5end
Coexpression cluster:NA
Association with transcript: 111bp_to_ENSMUST00000128633_5end
EntrezGene:Brp44
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Brp44

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.20
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.50
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I28.62
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.91
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.29
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C414.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.13
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.05
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A67.51
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.19
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B29.10
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C68.18
heart, embryo E17.CNhs11025.479-18E510.93
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E313.90
heart, neonate N03.CNhs11221.1349-25I214.15
heart, neonate N10.CNhs11118.749-24G120.69
heart, neonate N16.CNhs11209.782-15G122.78
heart, neonate N20.CNhs11127.821-26I634.06
heart, neonate N25.CNhs11196.1351-25D330.08
heart, neonate N30.CNhs11202.1390-42D234.09
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I35.29
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A52.92
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D54.24
kidney, neonate N20.CNhs11113.832-19I16.35
kidney, neonate N25.CNhs11122.1353-25F36.12
kidney, neonate N30.CNhs11203.1385-42H111.85
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B914.04
liver, neonate N20.CNhs11220.823-25A317.68
liver, neonate N25.CNhs11198.1368-26H116.15
liver, neonate N30.CNhs11106.1382-42D122.19
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.95
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G22.56
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.73
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C44.14
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G76.16
thymus, neonate N30.CNhs11132.1393-42G24.09
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.53
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B47.65





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:167391466..167391477,%2B&oldid=886231"