Personal tools

FFCP PHASE1:Mm9::chr4:125773910..125773952,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:125773910..125773952,+
|short_description=p2@Lsm10
|description=CAGE_peak_2_at_Lsm10_5end
|association_with_transcript=6bp_to_ENSMUST00000151831_5end
|EntrezGene=116748
|EntrezGene=116748
|HGNC=
|HGNC=
|UniProt=A8Y5G9
|UniProt=A8Y5G9
|association_with_transcript=6bp_to_ENSMUST00000151831_5end
|description=CAGE_peak_2_at_Lsm10_5end
|id=chr4:125773910..125773952,+
|ontology_enrichment_disease=
|phase1_expression=4.16387002472464,1.74487703819681,1.81999695755814,2.11724947914781,1.00179145989269,3.02182689441402,4.20502753071946,4.26106967357202,1.40788722151667,3.04283884218592,3.93801326918661,3.19088635981346,5.82082481766099,4.63328132820686,4.66353666541928,4.85940641735582,2.79824751251259,4.57420139769445,4.2505474417779,4.66828616977833,3.656861476496,4.66667470644161,7.05239430675126,5.11975752938901,4.5881856213434,4.01962374880514,2.15380998079537,4.52489588640367,5.32065574477847,3.2763916868791,5.32153225572731,6.35030673459631,7.99584223859941,0,3.17736781726402,5.48574329683025,3.26670970019791,8.37063261473815,9.37602413428561,9.42342739152837,19.4116391050235,14.3439551841274,15.0508209439658,3.39921408534059,3.85232338634155,3.67093504323363,12.5182615095686,10.0291571935005,10.5449367712546,13.9989527333484,10.3589952002768,14.3752564364972,4.36234775750115,1.45072428402269,2.01656279485478,8.2323019531503,11.4613375975503,10.8291139378263,6.06949382578793,10.0508286061686,8.87363964908651,12.876092218627,16.0073063300005,21.5975932147536,25.7105254267413,24.8668040231135,11.085204089181,16.9056054341484,6.63613518774257,8.91039192989158,7.36137364729837,3.99911378165325,7.28866185140325,5.51208596467293,8.05101956553185,11.0306254393203,3.30347642998166,2.80912143787413,3.84016333140609,5.93488294785872,8.23388792421687,6.77187381723788,4.4669279840221,3.37657566019008,2.90316670775939,5.59794312399969,5.41012387036591,4.65998614563251,5.60373830665562,5.29000920747499,4.05810284182349,7.74381489283248,2.03991400112325,14.0322829825832,10.3964226791627,12.0967259516281,2.24711072210803,5.45377032249785,9.09251016110041,8.83348936275851,4.3661460130771,12.8326477414318,10.1922095882658,7.11066703153331,4.76280290224671,9.88103475352884,9.60496445528088,3.76806803072898,4.40194402200192,2.9688427812965,4.8575891494518,3.95805121805784,8.07154240396205,6.17962826265753,2.58695155698551,5.90632979249475,7.41584903203122,3.32578520915797,5.30766331169925,3.39710384889559,3.09178125844551,1.93950101254089,3.72783522436244,1.75668478206928,1.67557365450764,1.78819938646014,3.59445373517761,4.79922184794726,3.68503658511888,3.14560342750128,3.20250421973039,5.6544458450789,2.60736480288415,1.02286182932132,3.94797284663164,4.38051410282946,3.05518091550949,2.61254638281195,4.29628689337247,2.31486041475121,4.42409506073193,5.74755261083682,3.96136685571768,2.86339153887859,2.4493139694478,3.84341160854549,2.81105173679186,1.55222022443409,4.52692785158969,2.64748512234947,4.92663147659057,2.19195732427575,4.17070873838397,5.2237824978325,3.90986059175093,3.58261680273288,3.51106593656617,4.88961023517959,3.6941254921427,4.34964122324554,2.81431271977315,3.78130329068131,3.07768156260773,3.54175617145327,3.5481435964097,3.48800917125612,2.95100741539581,1.98501082024188,2.96207729844265,2.29834449710733,2.02672023864639,2.92399974850665,3.51280184465681,5.77087600669599,2.3131894342054,4.21908910755066,2.64335026387038,2.11560453330835,3.19932375802851,3.0190767341857,3.47942145569652,3.83198696784351,6.22658522765637,4.37518940058886,3.32170343081158,6.91735609840846,4.77536896720512,6.16765063327568,4.28920991662064,2.69645822596266,1.29682829924817,3.38540164532424,7.01771233526402,3.42745537829186,2.25415471346161,3.86937522906097,3.49114476901726,2.31448205638051,2.65593455921881,3.09981310757165,4.55296310739987,2.83813477020141,3.26097889795864,5.33904338291501,3.73462090715086,4.94696647246678,3.65148218499305,4.3411888755435,4.32863948028414,4.02774592431135,3.40483976227574,3.29473695825698,2.87536413054709,5.58211421502755,4.36852742360385,5.55673531483646,3.22915344339442,4.3419916922703,3.51031061316549,4.54779388249163,2.77040459951444,3.05541154395339,2.58159273117352,2.51259386162724,3.57065461329021,3.12213836572478,2.20689201748667,2.21464689648775,4.62418829106713,3.27726629431476,3.28101465545202,5.06271705035291,12.0633027151418,13.5976420954677,3.44234991113325,3.86311444826625,2.24770825982909,1.17211686592203,5.08198330667694,2.01976741763498,5.04813151066011,7.02789739733949,4.09304455692318,6.21318874676635,7.35235624471901,4.81230102341015,7.69140333182299,5.84511715822624,2.76701444562566,1.92792789853084,3.26462195979018,5.87616492101942,2.93196526836437,5.44401405809367,3.98235415019888,3.15614827001476,4.83717691143602,2.07465587731488,3.54362271456927,3.07435147943927,3.6179961043551,3.99887102425256,1.78248689192361,2.52829406348653,1.05418608574999,3.09406629744561,6.46835250932197,3.6012218806262,5.17434735131018,7.07312215604255,3.90148514013002,3.92411398724555,4.44282355625727,5.17590413494819,5.16277757740163,6.56679419677843,5.29268155331909,3.62749756471256,3.87514624070173,2.77439454669517,1.19372344003136,1.96969079694074,4.37221254944776,2.03967832211561,5.98048082792484,4.54051109519089,2.59272338317596,2.82552685507037,3.00727300986255,3.43167259809784,3.22959016988325,3.77868921273877,2.3493995546752,3.81868247206045,3.95419991976419,4.06638934253697,2.80813886136683,3.97267762427491,1.52853794622324,3.64133735239016,3.2234847732881,3.40282724579238,3.36998930558661,3.72803587852155,4.50954350947352,3.73791365109947,3.80554528051325,3.88902376688095,3.61647505737647,3.8859908862879,3.0512882047896,3.25510962109875,4.8235298435827,4.83168241652012,2.59227005632079,3.79213344753814,3.44632865993279,3.80030541509861,2.85825810551149,2.8644271306797,2.38417625737518,2.64429988943931,2.95379054349154,2.42319479875554,2.74344503957999,2.82313318383153,3.11865218367208,2.21287235772758,2.80504565235765,2.94749498699775,9.54539599508478,4.03712354742641,5.37230772365051,4.82973985080476,4.69206188627955,5.12824547948342,4.28736758158132,5.01572104035363,5.0827665835536,5.06357760157895,5.15605962095457,3.43706364687375,4.7955776383945,3.7769694869485,8.10027000278167,1.35096360967266,2.71885445390523,3.62432218226274,3.21740777510948,5.98537310101547,4.26834014385335,1.94485373654635,4.61148957781561,2.75765262675021,3.55594764482584,4.12070114477788,3.85103051510178,3.79045817645696,4.05566879824384,4.14977951049368,3.55837728385553,2.81710670581425,4.25022470271538,2.38146845641537,4.40360438590451,2.31491064556446,1.64834360321323,4.56316652416632,2.40008476669791,4.08194354166476,3.33810665926249,3.19762116591123,3.10560955370591,3.29996970777538,3.47563148458268,2.10455769150274,4.07412341537585,3.92799590160417,3.2031454893527,2.85662998889134,5.32000356120596,2.94379998253335,3.85813221962283,4.24677982494508,4.67863216890817,1.28922632428979,1.72159498861959,3.75005412503176,3.47801753430632
|phase1_expression=4.16387002472464,1.74487703819681,1.81999695755814,2.11724947914781,1.00179145989269,3.02182689441402,4.20502753071946,4.26106967357202,1.40788722151667,3.04283884218592,3.93801326918661,3.19088635981346,5.82082481766099,4.63328132820686,4.66353666541928,4.85940641735582,2.79824751251259,4.57420139769445,4.2505474417779,4.66828616977833,3.656861476496,4.66667470644161,7.05239430675126,5.11975752938901,4.5881856213434,4.01962374880514,2.15380998079537,4.52489588640367,5.32065574477847,3.2763916868791,5.32153225572731,6.35030673459631,7.99584223859941,0,3.17736781726402,5.48574329683025,3.26670970019791,8.37063261473815,9.37602413428561,9.42342739152837,19.4116391050235,14.3439551841274,15.0508209439658,3.39921408534059,3.85232338634155,3.67093504323363,12.5182615095686,10.0291571935005,10.5449367712546,13.9989527333484,10.3589952002768,14.3752564364972,4.36234775750115,1.45072428402269,2.01656279485478,8.2323019531503,11.4613375975503,10.8291139378263,6.06949382578793,10.0508286061686,8.87363964908651,12.876092218627,16.0073063300005,21.5975932147536,25.7105254267413,24.8668040231135,11.085204089181,16.9056054341484,6.63613518774257,8.91039192989158,7.36137364729837,3.99911378165325,7.28866185140325,5.51208596467293,8.05101956553185,11.0306254393203,3.30347642998166,2.80912143787413,3.84016333140609,5.93488294785872,8.23388792421687,6.77187381723788,4.4669279840221,3.37657566019008,2.90316670775939,5.59794312399969,5.41012387036591,4.65998614563251,5.60373830665562,5.29000920747499,4.05810284182349,7.74381489283248,2.03991400112325,14.0322829825832,10.3964226791627,12.0967259516281,2.24711072210803,5.45377032249785,9.09251016110041,8.83348936275851,4.3661460130771,12.8326477414318,10.1922095882658,7.11066703153331,4.76280290224671,9.88103475352884,9.60496445528088,3.76806803072898,4.40194402200192,2.9688427812965,4.8575891494518,3.95805121805784,8.07154240396205,6.17962826265753,2.58695155698551,5.90632979249475,7.41584903203122,3.32578520915797,5.30766331169925,3.39710384889559,3.09178125844551,1.93950101254089,3.72783522436244,1.75668478206928,1.67557365450764,1.78819938646014,3.59445373517761,4.79922184794726,3.68503658511888,3.14560342750128,3.20250421973039,5.6544458450789,2.60736480288415,1.02286182932132,3.94797284663164,4.38051410282946,3.05518091550949,2.61254638281195,4.29628689337247,2.31486041475121,4.42409506073193,5.74755261083682,3.96136685571768,2.86339153887859,2.4493139694478,3.84341160854549,2.81105173679186,1.55222022443409,4.52692785158969,2.64748512234947,4.92663147659057,2.19195732427575,4.17070873838397,5.2237824978325,3.90986059175093,3.58261680273288,3.51106593656617,4.88961023517959,3.6941254921427,4.34964122324554,2.81431271977315,3.78130329068131,3.07768156260773,3.54175617145327,3.5481435964097,3.48800917125612,2.95100741539581,1.98501082024188,2.96207729844265,2.29834449710733,2.02672023864639,2.92399974850665,3.51280184465681,5.77087600669599,2.3131894342054,4.21908910755066,2.64335026387038,2.11560453330835,3.19932375802851,3.0190767341857,3.47942145569652,3.83198696784351,6.22658522765637,4.37518940058886,3.32170343081158,6.91735609840846,4.77536896720512,6.16765063327568,4.28920991662064,2.69645822596266,1.29682829924817,3.38540164532424,7.01771233526402,3.42745537829186,2.25415471346161,3.86937522906097,3.49114476901726,2.31448205638051,2.65593455921881,3.09981310757165,4.55296310739987,2.83813477020141,3.26097889795864,5.33904338291501,3.73462090715086,4.94696647246678,3.65148218499305,4.3411888755435,4.32863948028414,4.02774592431135,3.40483976227574,3.29473695825698,2.87536413054709,5.58211421502755,4.36852742360385,5.55673531483646,3.22915344339442,4.3419916922703,3.51031061316549,4.54779388249163,2.77040459951444,3.05541154395339,2.58159273117352,2.51259386162724,3.57065461329021,3.12213836572478,2.20689201748667,2.21464689648775,4.62418829106713,3.27726629431476,3.28101465545202,5.06271705035291,12.0633027151418,13.5976420954677,3.44234991113325,3.86311444826625,2.24770825982909,1.17211686592203,5.08198330667694,2.01976741763498,5.04813151066011,7.02789739733949,4.09304455692318,6.21318874676635,7.35235624471901,4.81230102341015,7.69140333182299,5.84511715822624,2.76701444562566,1.92792789853084,3.26462195979018,5.87616492101942,2.93196526836437,5.44401405809367,3.98235415019888,3.15614827001476,4.83717691143602,2.07465587731488,3.54362271456927,3.07435147943927,3.6179961043551,3.99887102425256,1.78248689192361,2.52829406348653,1.05418608574999,3.09406629744561,6.46835250932197,3.6012218806262,5.17434735131018,7.07312215604255,3.90148514013002,3.92411398724555,4.44282355625727,5.17590413494819,5.16277757740163,6.56679419677843,5.29268155331909,3.62749756471256,3.87514624070173,2.77439454669517,1.19372344003136,1.96969079694074,4.37221254944776,2.03967832211561,5.98048082792484,4.54051109519089,2.59272338317596,2.82552685507037,3.00727300986255,3.43167259809784,3.22959016988325,3.77868921273877,2.3493995546752,3.81868247206045,3.95419991976419,4.06638934253697,2.80813886136683,3.97267762427491,1.52853794622324,3.64133735239016,3.2234847732881,3.40282724579238,3.36998930558661,3.72803587852155,4.50954350947352,3.73791365109947,3.80554528051325,3.88902376688095,3.61647505737647,3.8859908862879,3.0512882047896,3.25510962109875,4.8235298435827,4.83168241652012,2.59227005632079,3.79213344753814,3.44632865993279,3.80030541509861,2.85825810551149,2.8644271306797,2.38417625737518,2.64429988943931,2.95379054349154,2.42319479875554,2.74344503957999,2.82313318383153,3.11865218367208,2.21287235772758,2.80504565235765,2.94749498699775,9.54539599508478,4.03712354742641,5.37230772365051,4.82973985080476,4.69206188627955,5.12824547948342,4.28736758158132,5.01572104035363,5.0827665835536,5.06357760157895,5.15605962095457,3.43706364687375,4.7955776383945,3.7769694869485,8.10027000278167,1.35096360967266,2.71885445390523,3.62432218226274,3.21740777510948,5.98537310101547,4.26834014385335,1.94485373654635,4.61148957781561,2.75765262675021,3.55594764482584,4.12070114477788,3.85103051510178,3.79045817645696,4.05566879824384,4.14977951049368,3.55837728385553,2.81710670581425,4.25022470271538,2.38146845641537,4.40360438590451,2.31491064556446,1.64834360321323,4.56316652416632,2.40008476669791,4.08194354166476,3.33810665926249,3.19762116591123,3.10560955370591,3.29996970777538,3.47563148458268,2.10455769150274,4.07412341537585,3.92799590160417,3.2031454893527,2.85662998889134,5.32000356120596,2.94379998253335,3.85813221962283,4.24677982494508,4.67863216890817,1.28922632428979,1.72159498861959,3.75005412503176,3.47801753430632
|short_description=p2@Lsm10
}}
}}

Revision as of 14:57, 18 April 2012

Short description:p2@Lsm10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lsm10_5end
Coexpression cluster:NA
Association with transcript: 6bp_to_ENSMUST00000151831_5end
EntrezGene:Lsm10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lsm10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.82
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.63
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.25
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.05
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H19.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G919.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H214.34
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.23
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E816.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D95.60
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F410.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C64.42
eyeball, embryo E14.CNhs10521.399-16E25.75
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I63.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I97.02
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G36.57
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.95
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D42.81
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D94.82
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.38
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E44.83
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:125773910..125773952,%2B&oldid=899158"