Personal tools

FFCP PHASE1:Mm9::chr4:135519635..135519648,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:135519635..135519648,+
|short_description=p2@Gale
|description=CAGE_peak_2_at_Gale_5end
|association_with_transcript=0bp_to_ENSMUST00000102541,uc008vhk.1_5end
|EntrezGene=74246
|EntrezGene=74246
|HGNC=
|HGNC=
|UniProt=Q8R059,B1AV55
|UniProt=Q8R059,B1AV55
|association_with_transcript=0bp_to_ENSMUST00000102541,uc008vhk.1_5end
|description=CAGE_peak_2_at_Gale_5end
|id=chr4:135519635..135519648,+
|ontology_enrichment_disease=
|phase1_expression=1.28119077683835,8.72438519098403,7.73498706962211,4.83942738090928,5.50985302940982,3.18970616632591,5.13947809310157,0.129123323441576,0.563154888606667,0.70219357896598,0.34243593645101,0.638177271962691,0.342401459862411,0.262261207256992,1.33243904726265,0.607425802169478,0,0.473193248037357,0.411343300817216,1.27316895539409,1.10556277196391,1.09220046320974,1.04479915655574,3.35984087866154,4.12936705920906,8.03924749761028,7.75371593086335,4.95583835177545,4.56056206695297,3.02436155711917,7.53883736228036,1.90509202037889,2.46025915033828,0,4.04392267651784,4.15586613396231,3.67504841272264,1.67412652294763,4.6880120671428,1.57057123192139,1.76469446409304,0,3.39857247121808,0.125896817975577,0.202753862439029,0,0.782391344348039,2.18025156380447,1.5378032791413,0.58328969722285,1.95980990275508,4.31257693094915,0.335565212115473,0.725362142011344,0,1.54355661621568,0.286533439938757,0,4.45096213891115,4.23192783417626,2.53532561402472,1.69422266034566,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,0.599200221036809,3.45796474789399,1.65903379693564,1.62007125998029,1.68259969081106,2.85650984403804,2.42955395046775,1.34739879136449,2.87536413054709,1.83843757322004,1.10115880999389,1.78762273319263,1.99688493233117,2.50583946687368,4.66586982372289,1.56274011167028,1.3959149950069,1.12552522006336,0.61119299110724,2.94628585473668,1.99320353118744,1.67759501242771,1.36307147999731,0.982430281388212,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.842666520790511,1.02258193546835,0.779358013808606,0.35333957451034,1.12674735821344,0,0,0,3.24736561516821,2.02687892380079,2.52762222507392,0.45673551887624,0,0.445326417194474,0.867426633830679,1.21786191324856,0.691846491768175,0.150722640552623,0.117588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,1.29413479957927,0.441683036920787,0.484875253135222,0,2.04946557908083,1.67557365450764,3.32094171771169,1.1981512450592,1.79970819298022,1.65191295194984,0.898743836428936,1.37250180845588,1.7591609295801,0.869121600961382,1.02286182932132,0.83115217823824,1.29793010454206,0.101839363850316,0.124406970610093,0.758168275301024,0.841767423545896,1.17108398666433,1.60931473103431,0.900310649026746,1.05493372485001,0.748401490664606,1.0249097622788,0.562210347358373,0.517406741478031,1.94011193639558,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,2.1066395619397,1.28673953557358,2.84163499395593,1.03562886267751,0.469052119962192,0.900310307305074,0.946978942340841,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,1.05144974282064,1.44066457330998,1.65209391491899,2.64450566663544,0.853153002140936,0.696710015581316,0.902072229254653,2.01683524623343,1.77902435075896,0.951128130562796,0.474529061544512,0.494096864172033,0.754005626400808,1.1937388322469,0.58489226135736,2.69645822596266,1.94524244887225,2.98711909881551,0.758671603812327,1.02823661348756,1.1270773567308,0.203651327845314,1.16371492300575,0.350679099451593,0.252946148497029,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,1.16791574001266,1.17935397067922,0.899448449539415,2.43432145666204,0.241177159752417,0.50925170356284,1.43848068725405,0.486405680325106,2.19649130550465,0,0.744281895337007,0.624075346229121,1.01031551178845,1.07638448113147,0,0,1.32643988239339,0.814824882210129,0.169745085775188,0.938760993154008,0.670025029767263,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.478364305972461,0,0.172684981865896,0.289298117163023,1.50791283939272,0,1.96705709207614,0.551873492609465,0.481651769963376,0.703270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.891194696329576,0,0.809621403349789,1.16902343164525,0.395287777946524,1.92792789853084,0.141940085208269,1.06839362200353,0.651547837414304,0,0,0.242780636154981,2.41858845571801,1.32023555829129,0.885905678642318,1.22974059177571,1.29214146584111,1.09060118843252,0.712994756769443,0.948110273807448,2.10837217149998,0,1.02131881726136,0.720244376125241,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,1.31639216481697,0.304464949114599,2.58138878870081,0.42366414172764,0.441056796109924,0.32977250588296,0.645857706783622,0.422190474497091,0.716234064018819,0.328281799490123,2.04036585640896,1.29797711407357,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0.27338845544205,0,1.18984900995699,0,1.38199973804424,0.954670618015114,1.10717597753397,0.406638934253697,0.540026704109006,0.418176592028937,1.74690050996942,1.21377911746339,1.1571483801547,1.83229159388821,2.07383957266869,0.621339313086926,0.56369293868419,0.747582730219894,0.992750942742586,0.583353565032143,1.03327858782185,1.68956125490778,0.469428954583016,1.0416350787516,1.15345278868282,1.20792060413003,0.576060012515731,2.52808896502543,0.810900861160657,0.821687657318618,1.29920822977795,1.61124026100733,0.596044064343795,0.961563596159751,1.03382669022204,1.31256384932592,0.762068066549998,0.604957110821043,0.682205165178267,0.962118416403295,0.818138315270983,0.680191150845634,0.443971906748129,0.897138566094757,2.51826924546118,0,0.563047426353546,0.73260649706906,0.214368379079066,1.00314420807073,2.25900737046827,1.38097570952153,1.14579102687879,1.20297227640581,2.74033007908257,1.5107877947794,1.35004500046361,0.900642406448441,2.26571204492102,1.55328093525546,1.14166082342594,0.399024873401031,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,1.26348605881899,1.2673964994512,0.943131706930381,1.31098110457835,1.21647789569252,0.976402972245426,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,1.03039244094078,1.71434626192708,1.59728225543404,1.1921809497366,1.59881058295561,1.59985946706062,1.09998990259179,1.28049581010941,0.789209134313529,1.08643291076689,0,0.711810108745045,1.28055827088233,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,1.28922632428979,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=1.28119077683835,8.72438519098403,7.73498706962211,4.83942738090928,5.50985302940982,3.18970616632591,5.13947809310157,0.129123323441576,0.563154888606667,0.70219357896598,0.34243593645101,0.638177271962691,0.342401459862411,0.262261207256992,1.33243904726265,0.607425802169478,0,0.473193248037357,0.411343300817216,1.27316895539409,1.10556277196391,1.09220046320974,1.04479915655574,3.35984087866154,4.12936705920906,8.03924749761028,7.75371593086335,4.95583835177545,4.56056206695297,3.02436155711917,7.53883736228036,1.90509202037889,2.46025915033828,0,4.04392267651784,4.15586613396231,3.67504841272264,1.67412652294763,4.6880120671428,1.57057123192139,1.76469446409304,0,3.39857247121808,0.125896817975577,0.202753862439029,0,0.782391344348039,2.18025156380447,1.5378032791413,0.58328969722285,1.95980990275508,4.31257693094915,0.335565212115473,0.725362142011344,0,1.54355661621568,0.286533439938757,0,4.45096213891115,4.23192783417626,2.53532561402472,1.69422266034566,0.889294796111139,1.3498495759221,1.97773272513395,2.8419204597844,0.599200221036809,3.45796474789399,1.65903379693564,1.62007125998029,1.68259969081106,2.85650984403804,2.42955395046775,1.34739879136449,2.87536413054709,1.83843757322004,1.10115880999389,1.78762273319263,1.99688493233117,2.50583946687368,4.66586982372289,1.56274011167028,1.3959149950069,1.12552522006336,0.61119299110724,2.94628585473668,1.99320353118744,1.67759501242771,1.36307147999731,0.982430281388212,0.289864488701678,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.842666520790511,1.02258193546835,0.779358013808606,0.35333957451034,1.12674735821344,0,0,0,3.24736561516821,2.02687892380079,2.52762222507392,0.45673551887624,0,0.445326417194474,0.867426633830679,1.21786191324856,0.691846491768175,0.150722640552623,0.117588707135705,0.376999773989026,0.741584903203122,0.578397427679647,0.884610551949874,1.29413479957927,0.441683036920787,0.484875253135222,0,2.04946557908083,1.67557365450764,3.32094171771169,1.1981512450592,1.79970819298022,1.65191295194984,0.898743836428936,1.37250180845588,1.7591609295801,0.869121600961382,1.02286182932132,0.83115217823824,1.29793010454206,0.101839363850316,0.124406970610093,0.758168275301024,0.841767423545896,1.17108398666433,1.60931473103431,0.900310649026746,1.05493372485001,0.748401490664606,1.0249097622788,0.562210347358373,0.517406741478031,1.94011193639558,0.756424320671277,0.527853372491847,1.31517439456545,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,2.1066395619397,1.28673953557358,2.84163499395593,1.03562886267751,0.469052119962192,0.900310307305074,0.946978942340841,0.590292695242212,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0.146199987425332,0,0.268412837520744,1.05144974282064,1.44066457330998,1.65209391491899,2.64450566663544,0.853153002140936,0.696710015581316,0.902072229254653,2.01683524623343,1.77902435075896,0.951128130562796,0.474529061544512,0.494096864172033,0.754005626400808,1.1937388322469,0.58489226135736,2.69645822596266,1.94524244887225,2.98711909881551,0.758671603812327,1.02823661348756,1.1270773567308,0.203651327845314,1.16371492300575,0.350679099451593,0.252946148497029,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,1.16791574001266,1.17935397067922,0.899448449539415,2.43432145666204,0.241177159752417,0.50925170356284,1.43848068725405,0.486405680325106,2.19649130550465,0,0.744281895337007,0.624075346229121,1.01031551178845,1.07638448113147,0,0,1.32643988239339,0.814824882210129,0.169745085775188,0.938760993154008,0.670025029767263,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.478364305972461,0,0.172684981865896,0.289298117163023,1.50791283939272,0,1.96705709207614,0.551873492609465,0.481651769963376,0.703270119553219,0.163934945376675,0,0.315508219416257,0.780877488593277,0.430846795465598,0,0.891194696329576,0,0.809621403349789,1.16902343164525,0.395287777946524,1.92792789853084,0.141940085208269,1.06839362200353,0.651547837414304,0,0,0.242780636154981,2.41858845571801,1.32023555829129,0.885905678642318,1.22974059177571,1.29214146584111,1.09060118843252,0.712994756769443,0.948110273807448,2.10837217149998,0,1.02131881726136,0.720244376125241,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,1.31639216481697,0.304464949114599,2.58138878870081,0.42366414172764,0.441056796109924,0.32977250588296,0.645857706783622,0.422190474497091,0.716234064018819,0.328281799490123,2.04036585640896,1.29797711407357,0.341741761595705,0.619160603889667,0.370389054739423,0.376736914009382,0.27338845544205,0,1.18984900995699,0,1.38199973804424,0.954670618015114,1.10717597753397,0.406638934253697,0.540026704109006,0.418176592028937,1.74690050996942,1.21377911746339,1.1571483801547,1.83229159388821,2.07383957266869,0.621339313086926,0.56369293868419,0.747582730219894,0.992750942742586,0.583353565032143,1.03327858782185,1.68956125490778,0.469428954583016,1.0416350787516,1.15345278868282,1.20792060413003,0.576060012515731,2.52808896502543,0.810900861160657,0.821687657318618,1.29920822977795,1.61124026100733,0.596044064343795,0.961563596159751,1.03382669022204,1.31256384932592,0.762068066549998,0.604957110821043,0.682205165178267,0.962118416403295,0.818138315270983,0.680191150845634,0.443971906748129,0.897138566094757,2.51826924546118,0,0.563047426353546,0.73260649706906,0.214368379079066,1.00314420807073,2.25900737046827,1.38097570952153,1.14579102687879,1.20297227640581,2.74033007908257,1.5107877947794,1.35004500046361,0.900642406448441,2.26571204492102,1.55328093525546,1.14166082342594,0.399024873401031,1.36586884603307,0.972426868273176,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,0.320919209591815,1.26348605881899,1.2673964994512,0.943131706930381,1.31098110457835,1.21647789569252,0.976402972245426,0.952587382566147,0.927074607558844,0.578727661391115,2.06042950401653,1.03039244094078,1.71434626192708,1.59728225543404,1.1921809497366,1.59881058295561,1.59985946706062,1.09998990259179,1.28049581010941,0.789209134313529,1.08643291076689,0,0.711810108745045,1.28055827088233,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,1.28922632428979,0.765153328275374,0.882365676478062,0.695603506861264
|short_description=p2@Gale
}}
}}

Revision as of 15:15, 18 April 2012

Short description:p2@Gale
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gale_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000102541, uc008vhk.1_5end
EntrezGene:Gale
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gale

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H98.04
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B94.56
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:135519635..135519648,%2B&oldid=901863"