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FFCP PHASE1:Mm9::chr4:143002823..143002886,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:143002823..143002886,+
|short_description=p1@Pramef8
|description=CAGE_peak_1_at_Pramef8_5end
|association_with_transcript=0bp_to_ENSMUST00000132915_5end
|EntrezGene=242736
|EntrezGene=242736
|HGNC=
|HGNC=
|UniProt=A6PW90
|UniProt=A6PW90
|association_with_transcript=0bp_to_ENSMUST00000132915_5end
|description=CAGE_peak_1_at_Pramef8_5end
|id=chr4:143002823..143002886,+
|ontology_enrichment_disease=
|phase1_expression=12.8119077683835,4.18770489167233,5.0049916332849,3.0246421130683,2.00358291978539,4.02910252588535,3.50418960893289,19.3684985162364,7.32101355188667,4.68129052643987,9.41698825240277,10.6096971463797,18.1472773727078,16.2601948499335,2.6648780945253,4.85940641735582,0.699561878128147,11.1989068702174,10.1464680868247,8.91218268775863,12.7564935226605,13.3049874609186,10.7091913546964,7.1996590257033,7.79991555628378,7.46501553349526,5.59990595006797,6.03319451520489,8.55105387553682,3.78045194639896,4.8780712344167,5.71527606113668,4.92051830067656,0,4.33277429626912,4.15586613396231,2.85837098767317,15.0671387065287,10.1573594788094,13.088093599345,14.7057872007754,18.442228093878,11.6522484727477,9.19046771221714,9.0225468785368,5.68994931701213,3.9119567217402,2.39827672018491,4.61340983742391,4.08302788055995,3.21968769738334,1.43752564364972,9.56360854529097,10.1550699881588,13.779845764841,13.6347501099052,6.30373567865265,7.21940929188419,9.5088736604011,11.1088105647127,5.07065122804943,4.74382344896785,0.889294796111139,4.94944844504769,1.97773272513395,4.9733608046227,3.89480143673926,2.68952813725088,7.8804105354443,7.56033254657468,10.5162480675691,3.99911378165325,6.62605622854841,8.57435594504678,7.28425579738596,4.5960939330501,8.8092704799511,7.02280359468532,8.44835932909339,7.25374582516066,9.33173964744578,15.6274011167028,8.93385596804419,4.50210088025344,6.87592114995646,5.89257170947335,6.83384067835694,7.45597783301202,7.1182621733193,5.44115232768856,11.0148505706638,4.30211938490693,2.03991400112325,4.85732872474035,3.24888208723835,0.448026887097336,6.17955448579708,8.35108580632483,7.01422212427746,6.71345191569646,12.6759077799012,10.2661181931454,2.54805239706646,0,9.74209684550464,8.61423542615335,7.58286667522175,6.16592950482924,14.7594593678888,8.90652834388949,7.98032503124225,10.9607572192371,8.53277339847416,10.5505848386836,9.99504010653491,7.53999547978053,10.1349936771093,5.78397427679647,7.07688441559899,8.7354098971601,6.40440403535141,5.33362778448744,11.1835056730873,9.36898550436951,14.2423760633149,7.40825460104915,5.39168060276641,3.59941638596045,6.4805815807263,7.48953197024113,8.6925114535539,10.9319286338192,9.38651329038293,6.64860189058859,8.10373373782284,11.6813709408785,10.4894544765826,7.46441823660558,5.55990068554084,7.57590681191306,9.62891277924007,10.8053989083732,10.2635413989049,12.3577950625286,9.79725587779121,12.4270308676304,13.118241438362,10.0894314588216,9.26942369611222,7.56424320671277,7.5658983390498,8.11024209982027,11.1218899690239,11.8405736617537,12.1411460480687,7.96137067273973,0.702213187313235,2.31613116403244,5.96743348730745,8.69928244649108,7.50483391939508,7.56260658136262,5.68187365404505,9.24791889212798,7.71335564436891,9.76642567951713,6.70683503499048,8.05680862333469,6.08871444679878,8.53670813211295,7.45833047821873,8.77199924551994,8.34290438105992,8.32079796314305,7.99101804543684,10.496270462687,10.5734010554815,6.61126416658861,10.6644125267617,7.19933682767359,7.34544529535932,5.04208811558356,6.22658522765637,5.70676878337677,5.21981967698963,6.58795818896044,10.304743560811,8.55512829776949,8.38345574612217,8.98819408654222,7.13255564586491,7.76650965692032,11.1904061562318,8.45438993311993,10.1436962105772,6.51684249105006,6.40043207653165,8.55657002661886,8.72664212314751,5.46157547524528,9.41992367048249,8.14421281883883,7.41131567717872,3.50374722003798,3.14494392181125,2.9232074610031,1.62288097110802,2.17059443777175,4.83789118384698,4.02774592431135,5.0261920300261,3.56929837144506,2.87536413054709,4.09355042435354,9.04909252032226,7.57736633841335,4.66433275156972,7.23665282045051,8.31389355749721,7.76914788258988,6.51859905768104,6.78980343100753,7.74477819352057,7.53778158488171,5.95109102215034,5.26860849216057,8.82756806994669,10.85176979279,7.65382889555938,8.35702905050264,9.67035898449015,9.54683786637976,10.5553898757491,12.5098307278303,9.34352118736169,5.24279817978992,10.2752377592187,10.7834751664827,7.21313759657372,12.1186045058099,10.0962630213202,7.80877488593277,6.89354872744957,7.16906393857656,10.2487390077901,10.4738316391868,6.47697122679831,9.35218745316198,9.88219444866309,10.6036034419196,8.65834519770439,10.3278050127008,10.4247653986289,9.07335676348945,2.65490276679926,7.28341908464944,7.86041248108353,6.03536255218874,5.31543407185391,4.91896236710284,7.23599220871019,8.72480950746013,10.3384239731569,4.74055136903724,6.32511651449993,4.12542172992747,14.2984634416591,8.64293251350289,12.5477923269272,10.9311887866112,9.75371285032505,11.4156043265325,10.5311373185357,20.0946866415636,8.91752490642099,12.4980921809654,4.6310963591542,4.61681508236144,7.75029248140347,8.56443533979813,7.5204576721976,5.9090723908222,7.86998258900597,10.5692422145991,7.86006051670122,11.144890870014,7.03739204004904,5.27431679613135,4.78429797023588,4.57556346413045,4.41943917984024,6.85762116385924,4.28419918793714,2.86401185404534,6.95939185878498,5.89626454667861,9.28845931067491,8.15444354456428,7.64268973111622,9.17077555416781,8.01738520535759,9.94672579539312,8.42497326396654,15.5334828271731,52.9871362363139,14.054555328134,11.0857188606255,10.8892665472667,12.3993430538622,14.1923145412254,11.3836521486381,10.0257376329842,10.5907937869968,25.1247485659046,27.0748205882394,10.7443781013581,7.29810775044591,7.80603274452687,7.7952493786677,5.37080087002444,10.1327490938445,10.3368086587173,8.12292399460175,10.3995443446592,8.99240318528998,9.37683521772617,8.96612502805722,10.1022433722346,12.8564592399726,7.9355634265324,5.99362074109975,4.93426211352116,4.86865387455827,6.56844619709447,7.88266396894964,7.50921659495787,7.07415650960917,3.51100472824754,9.60078132449013,6.90487854760765,5.15605962095457,8.59265911718438,7.53590771747707,9.82012066606611,6.75022500231806,5.85417564191487,6.79713613476307,8.80192529978094,7.88783841639743,6.3843979744165,6.14640980714883,6.32077464377565,5.03071590307158,4.96377472815038,4.22268782823069,5.97501665992793,5.13470735346904,5.05394423527595,7.09742039692671,5.47016390019621,6.64854703036165,5.05798703998467,6.77738533676237,4.28664322154766,5.09891034157364,4.82273051159263,6.1812885120496,3.82717192349433,5.48590803816665,4.96932257246145,4.5302876089991,5.95920308192547,5.74067220533517,7.10762706290083,4.57319932181931,5.78753365163254,6.92600980613895,4.48913817326191,5.33857581558784,4.92522411877817,4.09231043169689,6.19747364743864,6.94463799532109,8.24374907195222,7.71974307869848,6.23126056740065,6.69509162240952,7.72069966918304,8.11537424671475
|phase1_expression=12.8119077683835,4.18770489167233,5.0049916332849,3.0246421130683,2.00358291978539,4.02910252588535,3.50418960893289,19.3684985162364,7.32101355188667,4.68129052643987,9.41698825240277,10.6096971463797,18.1472773727078,16.2601948499335,2.6648780945253,4.85940641735582,0.699561878128147,11.1989068702174,10.1464680868247,8.91218268775863,12.7564935226605,13.3049874609186,10.7091913546964,7.1996590257033,7.79991555628378,7.46501553349526,5.59990595006797,6.03319451520489,8.55105387553682,3.78045194639896,4.8780712344167,5.71527606113668,4.92051830067656,0,4.33277429626912,4.15586613396231,2.85837098767317,15.0671387065287,10.1573594788094,13.088093599345,14.7057872007754,18.442228093878,11.6522484727477,9.19046771221714,9.0225468785368,5.68994931701213,3.9119567217402,2.39827672018491,4.61340983742391,4.08302788055995,3.21968769738334,1.43752564364972,9.56360854529097,10.1550699881588,13.779845764841,13.6347501099052,6.30373567865265,7.21940929188419,9.5088736604011,11.1088105647127,5.07065122804943,4.74382344896785,0.889294796111139,4.94944844504769,1.97773272513395,4.9733608046227,3.89480143673926,2.68952813725088,7.8804105354443,7.56033254657468,10.5162480675691,3.99911378165325,6.62605622854841,8.57435594504678,7.28425579738596,4.5960939330501,8.8092704799511,7.02280359468532,8.44835932909339,7.25374582516066,9.33173964744578,15.6274011167028,8.93385596804419,4.50210088025344,6.87592114995646,5.89257170947335,6.83384067835694,7.45597783301202,7.1182621733193,5.44115232768856,11.0148505706638,4.30211938490693,2.03991400112325,4.85732872474035,3.24888208723835,0.448026887097336,6.17955448579708,8.35108580632483,7.01422212427746,6.71345191569646,12.6759077799012,10.2661181931454,2.54805239706646,0,9.74209684550464,8.61423542615335,7.58286667522175,6.16592950482924,14.7594593678888,8.90652834388949,7.98032503124225,10.9607572192371,8.53277339847416,10.5505848386836,9.99504010653491,7.53999547978053,10.1349936771093,5.78397427679647,7.07688441559899,8.7354098971601,6.40440403535141,5.33362778448744,11.1835056730873,9.36898550436951,14.2423760633149,7.40825460104915,5.39168060276641,3.59941638596045,6.4805815807263,7.48953197024113,8.6925114535539,10.9319286338192,9.38651329038293,6.64860189058859,8.10373373782284,11.6813709408785,10.4894544765826,7.46441823660558,5.55990068554084,7.57590681191306,9.62891277924007,10.8053989083732,10.2635413989049,12.3577950625286,9.79725587779121,12.4270308676304,13.118241438362,10.0894314588216,9.26942369611222,7.56424320671277,7.5658983390498,8.11024209982027,11.1218899690239,11.8405736617537,12.1411460480687,7.96137067273973,0.702213187313235,2.31613116403244,5.96743348730745,8.69928244649108,7.50483391939508,7.56260658136262,5.68187365404505,9.24791889212798,7.71335564436891,9.76642567951713,6.70683503499048,8.05680862333469,6.08871444679878,8.53670813211295,7.45833047821873,8.77199924551994,8.34290438105992,8.32079796314305,7.99101804543684,10.496270462687,10.5734010554815,6.61126416658861,10.6644125267617,7.19933682767359,7.34544529535932,5.04208811558356,6.22658522765637,5.70676878337677,5.21981967698963,6.58795818896044,10.304743560811,8.55512829776949,8.38345574612217,8.98819408654222,7.13255564586491,7.76650965692032,11.1904061562318,8.45438993311993,10.1436962105772,6.51684249105006,6.40043207653165,8.55657002661886,8.72664212314751,5.46157547524528,9.41992367048249,8.14421281883883,7.41131567717872,3.50374722003798,3.14494392181125,2.9232074610031,1.62288097110802,2.17059443777175,4.83789118384698,4.02774592431135,5.0261920300261,3.56929837144506,2.87536413054709,4.09355042435354,9.04909252032226,7.57736633841335,4.66433275156972,7.23665282045051,8.31389355749721,7.76914788258988,6.51859905768104,6.78980343100753,7.74477819352057,7.53778158488171,5.95109102215034,5.26860849216057,8.82756806994669,10.85176979279,7.65382889555938,8.35702905050264,9.67035898449015,9.54683786637976,10.5553898757491,12.5098307278303,9.34352118736169,5.24279817978992,10.2752377592187,10.7834751664827,7.21313759657372,12.1186045058099,10.0962630213202,7.80877488593277,6.89354872744957,7.16906393857656,10.2487390077901,10.4738316391868,6.47697122679831,9.35218745316198,9.88219444866309,10.6036034419196,8.65834519770439,10.3278050127008,10.4247653986289,9.07335676348945,2.65490276679926,7.28341908464944,7.86041248108353,6.03536255218874,5.31543407185391,4.91896236710284,7.23599220871019,8.72480950746013,10.3384239731569,4.74055136903724,6.32511651449993,4.12542172992747,14.2984634416591,8.64293251350289,12.5477923269272,10.9311887866112,9.75371285032505,11.4156043265325,10.5311373185357,20.0946866415636,8.91752490642099,12.4980921809654,4.6310963591542,4.61681508236144,7.75029248140347,8.56443533979813,7.5204576721976,5.9090723908222,7.86998258900597,10.5692422145991,7.86006051670122,11.144890870014,7.03739204004904,5.27431679613135,4.78429797023588,4.57556346413045,4.41943917984024,6.85762116385924,4.28419918793714,2.86401185404534,6.95939185878498,5.89626454667861,9.28845931067491,8.15444354456428,7.64268973111622,9.17077555416781,8.01738520535759,9.94672579539312,8.42497326396654,15.5334828271731,52.9871362363139,14.054555328134,11.0857188606255,10.8892665472667,12.3993430538622,14.1923145412254,11.3836521486381,10.0257376329842,10.5907937869968,25.1247485659046,27.0748205882394,10.7443781013581,7.29810775044591,7.80603274452687,7.7952493786677,5.37080087002444,10.1327490938445,10.3368086587173,8.12292399460175,10.3995443446592,8.99240318528998,9.37683521772617,8.96612502805722,10.1022433722346,12.8564592399726,7.9355634265324,5.99362074109975,4.93426211352116,4.86865387455827,6.56844619709447,7.88266396894964,7.50921659495787,7.07415650960917,3.51100472824754,9.60078132449013,6.90487854760765,5.15605962095457,8.59265911718438,7.53590771747707,9.82012066606611,6.75022500231806,5.85417564191487,6.79713613476307,8.80192529978094,7.88783841639743,6.3843979744165,6.14640980714883,6.32077464377565,5.03071590307158,4.96377472815038,4.22268782823069,5.97501665992793,5.13470735346904,5.05394423527595,7.09742039692671,5.47016390019621,6.64854703036165,5.05798703998467,6.77738533676237,4.28664322154766,5.09891034157364,4.82273051159263,6.1812885120496,3.82717192349433,5.48590803816665,4.96932257246145,4.5302876089991,5.95920308192547,5.74067220533517,7.10762706290083,4.57319932181931,5.78753365163254,6.92600980613895,4.48913817326191,5.33857581558784,4.92522411877817,4.09231043169689,6.19747364743864,6.94463799532109,8.24374907195222,7.71974307869848,6.23126056740065,6.69509162240952,7.72069966918304,8.11537424671475
|short_description=p1@Pramef8
}}
}}

Revision as of 15:28, 18 April 2012

Short description:p1@Pramef8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pramef8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000132915_5end
EntrezGene:Pramef8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pramef8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.61
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B98.55
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.19
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D97.12
Mouse Schwann, donor2.CNhs12573.11746-123F95.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.01
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.74
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H914.76
adrenal gland, adult.CNhs10508.49-24D78.91
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C110.00
adrenal gland, neonate N25.CNhs11223.1377-27I37.54
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F58.74
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I214.24
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.48
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F110.93
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.49
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.46
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G47.58
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E210.81
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A210.09
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H27.56
forelimb, embryo E13.CNhs10589.384-1E27.57
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E98.70
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C89.25
heart, embryo E16.CNhs11021.457-17C67.71
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G36.71
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G17.46
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D28.32
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I310.57
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F28.56
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E37.13
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I911.19
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C76.40
kidney, neonate N00.CNhs11214.646-21G78.56
kidney, neonate N10.CNhs11206.758-6D58.73
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H18.14
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F45.03
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E58.83
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A48.36
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H29.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.35
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I410.42
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G814.30
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C712.55
pituitary gland, embryo E14.CNhs11037.398-44A510.93
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F510.53
pituitary gland, neonate N00.CNhs11190.1308-22E920.09
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G312.50
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H38.56
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C45.91
small intestine, neonate N16.CNhs11114.790-21I17.87
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G27.86
spleen, embryo E16.CNhs11035.461-43C111.14
spleen, embryo E18.CNhs11011.1271-21F27.04
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H14.78
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D49.29
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E49.95
stomach, neonate N30.CNhs11134.1386-42I18.42
submandibular gland, adult.CNhs10469.59-29C115.53
testis, adult.CNhs10504.57-7G552.99
testis, embryo E13.CNhs11031.389-23F514.05
testis, embryo E15.CNhs11034.443-27C511.09
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I512.40
testis, embryo E18.CNhs11027.503-18G514.19
testis, neonate N00.CNhs11189.1300-22B711.38
testis, neonate N07.CNhs11222.726-26I410.03
testis, neonate N10.CNhs11204.763-44D910.59
testis, neonate N20.CNhs11110.839-18H325.12
testis, neonate N30.CNhs11130.1391-42E227.07
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I47.30
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C57.80
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F810.34
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C410.40
thymus, neonate N07.CNhs11211.713-19D38.99
thymus, neonate N10.CNhs11194.748-24E49.38
thymus, neonate N20.CNhs11186.820-7A28.97
thymus, neonate N25.CNhs11125.1362-25G710.10
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F57.88
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I87.89
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.15
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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