Personal tools

FFCP PHASE1:Mm9::chr5:87233306..87233322,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:87233306..87233322,+
|short_description=p2@Ythdc1
|description=CAGE_peak_2_at_Ythdc1_5end
|association_with_transcript=48bp_to_ENSMUST00000120498_5end
|EntrezGene=231386
|EntrezGene=231386
|HGNC=
|HGNC=
|UniProt=E9Q5K9
|UniProt=E9Q5K9
|association_with_transcript=48bp_to_ENSMUST00000120498_5end
|description=CAGE_peak_2_at_Ythdc1_5end
|id=chr5:87233306..87233322,+
|ontology_enrichment_disease=
|phase1_expression=7.04654927261093,10.4692622291808,4.54999239389536,7.86406949397758,9.5170188689806,6.5472916045637,3.27057696833736,14.0744422551318,23.0893504328733,30.4283884218592,7.53359060192222,7.17949430958028,11.641649635322,13.3753215701066,2.6648780945253,4.25198061518635,0.699561878128147,5.0473946457318,8.36398044995006,3.81950686618227,4.5072943780067,4.36880185283895,2.61199789138935,1.75991665072747,2.06468352960453,2.29692785646008,4.73838195774982,3.01659725760245,1.14014051673824,3.2763916868791,1.77384408524244,0,1.84519436275371,0,2.88851619751275,3.65716219788683,4.28755648150975,9.62622750694888,4.6880120671428,9.42342739152837,11.1763982725893,4.78131839470912,6.79714494243615,3.14742044938943,2.53442328048786,1.46837401729345,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0.839918529752175,0,9.06026072711776,18.859415692295,14.452033363126,3.08711323243136,3.72493471920384,1.03134418455488,3.43937983461316,2.11596391708813,2.53532561402472,0.677689064138264,0,1.7997994345628,0.988866362566974,0.7104801149461,0,0.384218305321555,4.66603255388149,2.97013064329719,4.6271491497304,1.14260393761521,2.65042249141936,2.69479758272899,2.77951865952885,3.67687514644008,2.20231761998777,2.42605942361857,1.68967186581868,2.37395317914349,2.8361169516747,3.12548022334056,1.11673199600552,1.12552522006336,2.44477196442896,5.30331453852602,3.27454865837937,3.72798891650601,3.10477392666055,3.09843396437821,9.56552812715537,4.30211938490693,1.3599426674155,2.15881276655127,4.54843492213368,2.24013443548668,3.37066608316204,2.38602451609281,1.29893002301434,0.35333957451034,7.32385782838739,5.13305909657271,7.64415719119937,0,1.5154372870785,2.28023878927589,1.01104889002957,5.02409070763864,16.0541487861246,3.11728492036132,3.99016251562112,5.1759131313064,4.15107895060905,3.61734337326294,5.64425794251383,3.26733137457156,4.20231445148436,5.06097749219691,1.76922110389975,3.88240439873782,3.3126227769059,6.30337829075789,0,3.51336956413857,4.60782754989601,3.83185582812887,5.99075622529601,4.19931911695385,5.33694953706872,4.49371918214468,9.60751265919116,8.79580464790051,4.34560800480691,2.30143911597297,2.90903262383384,3.40706652442291,3.7680564624617,4.47865094196335,2.27450482590307,4.20883711772948,6.63614259109789,2.06911893990126,6.12211241338187,5.87748789559289,5.57899293040888,7.68682321709099,4.49768277886698,7.76110112217047,3.88022387279116,5.48407632486676,7.5658983390498,5.04150184583422,8.34141747676794,6.96504333044333,8.64284972913362,5.17489093728082,7.72434506044558,4.88961023517959,2.55747149456033,3.93538967817454,4.22146907965973,5.40186184383045,5.68187365404505,4.9191057936851,6.47921874126989,5.34828072925938,3.75582761959467,4.32031766758527,5.10135534731789,5.74586124276833,5.51267904911819,4.5321996101853,2.63460138349261,2.68412837520744,6.72927835405207,6.89460902941206,4.29544417878937,4.23120906661671,5.54549451391608,4.64473343720877,4.38149368495117,3.83198696784351,4.00280478920767,3.42406127002606,3.79623249235609,2.47048432086016,3.51869292320377,4.17808591286417,4.67913809085888,2.69645822596266,2.59365659849633,2.98711909881551,2.0863469104839,5.1411830674378,5.63538678365402,4.68398054044223,5.04276466635827,3.7873342740772,4.99568643281633,4.13308414342886,3.45397201251025,2.71473760627961,2.66807364378434,4.33797274861845,2.55526693647164,2.69834534861824,2.63718157805054,3.13530307678142,2.80088436959562,4.31544206176216,1.29708181420028,3.29473695825698,8.62609239164127,3.72140947668503,4.68056509671841,3.78868316920668,2.87035861635059,2.41221760681684,4.80358294433172,5.11626811780309,5.70377417547091,6.28056817368196,6.57132695207806,5.3602002381381,4.99891645860629,5.46374214001837,8.98520321405289,7.75126413770712,5.89982644032702,6.22680595919804,5.00786447411097,3.90552458170081,0,0.54390568381871,3.44234991113325,3.31124095565679,2.40825884981688,2.57865710502847,4.91804836130026,2.7771801992481,2.83957397474631,3.12350995437311,6.03185513651837,3.58453196928828,4.45597348164788,5.09537755419898,4.85772842009873,4.09158201075837,9.09161889277004,3.85585579706168,4.11626247103979,4.62970569534864,4.23506094319298,4.94910368917606,5.30980553359851,3.39892890616974,1.51161778482376,4.52652191414155,1.47650946440386,2.76691633149535,3.6179961043551,5.45300594216258,2.85197902707777,3.79244109522979,4.21674434299995,6.18813259489121,7.14923172082955,8.64293251350289,3.62204314591713,4.28674070063185,5.67488747655275,2.14042581122485,6.74650984468696,1.522324745573,4.92810586933792,4.44847348814022,3.52845436887939,13.1909002353184,5.32832608096488,6.09160541774374,3.81991500810037,7.38634048852776,3.20628920292836,2.22510362412612,3.75915937755276,2.68302928352189,6.85219751267933,3.39063222608444,5.74115756428306,3.43167259809784,8.66889992968662,9.37674730568509,8.7065983496787,1.90934123603023,4.9032079005076,6.70954241518601,6.37231510848627,5.85447228840512,6.55087691238533,6.33862428008657,3.55409859618945,1.83229159388821,3.11075935900303,0,2.81846469342095,4.63501292736334,3.64008679005615,3.30567020184881,4.52059382172059,4.56181538825101,3.87278887530988,3.51551839078665,6.08184197669123,3.14059357073808,4.89651010638371,10.7443781013581,3.85177909051312,3.80030541509861,5.97635785697857,8.41425469637163,6.35780335300048,9.49544051207754,7.38447635872886,9.89471209491847,7.46826705218998,8.87270429204197,12.1822350924691,9.1401249558313,11.4539364137938,3.85441652145859,3.32978930061097,2.69141569828427,3.35769232728157,3.28422309854724,4.50437941082837,7.50921659495787,3.85863082342319,2.50786052017682,4.51801474093653,4.60325236507177,5.72895513439397,4.64003592327956,5.48066015816514,5.2877572817279,3.37511250115903,5.85417564191487,5.89085131679466,4.65984280576638,7.78405106881325,4.38927360741134,4.60980735536162,7.29320151204882,5.03071590307158,4.77993121970037,3.55594764482584,7.2112270033613,6.09746498224449,4.54854981174835,8.87177549615839,6.41329560712659,6.367622507952,5.6342134116285,6.08815970929501,6.19181798667996,4.86714168968393,5.01563973205633,5.35711671044299,4.41596760403192,8.22886205724997,6.74408063405482,4.05341522910446,6.83128158171944,5.08190654242785,6.93839784711747,5.48783918618318,5.5244639401947,6.79020569229309,7.85599180320834,5.45721083371201,5.71325997778268,2.04615521584845,6.35241048862461,4.43685205256625,3.74715866906919,2.57324769289949,3.22306581072447,2.29545998482612,5.51478547798789,2.78241402744506
|phase1_expression=7.04654927261093,10.4692622291808,4.54999239389536,7.86406949397758,9.5170188689806,6.5472916045637,3.27057696833736,14.0744422551318,23.0893504328733,30.4283884218592,7.53359060192222,7.17949430958028,11.641649635322,13.3753215701066,2.6648780945253,4.25198061518635,0.699561878128147,5.0473946457318,8.36398044995006,3.81950686618227,4.5072943780067,4.36880185283895,2.61199789138935,1.75991665072747,2.06468352960453,2.29692785646008,4.73838195774982,3.01659725760245,1.14014051673824,3.2763916868791,1.77384408524244,0,1.84519436275371,0,2.88851619751275,3.65716219788683,4.28755648150975,9.62622750694888,4.6880120671428,9.42342739152837,11.1763982725893,4.78131839470912,6.79714494243615,3.14742044938943,2.53442328048786,1.46837401729345,0.782391344348039,0.436050312760893,0.659058548203415,0.58328969722285,0.839918529752175,0,9.06026072711776,18.859415692295,14.452033363126,3.08711323243136,3.72493471920384,1.03134418455488,3.43937983461316,2.11596391708813,2.53532561402472,0.677689064138264,0,1.7997994345628,0.988866362566974,0.7104801149461,0,0.384218305321555,4.66603255388149,2.97013064329719,4.6271491497304,1.14260393761521,2.65042249141936,2.69479758272899,2.77951865952885,3.67687514644008,2.20231761998777,2.42605942361857,1.68967186581868,2.37395317914349,2.8361169516747,3.12548022334056,1.11673199600552,1.12552522006336,2.44477196442896,5.30331453852602,3.27454865837937,3.72798891650601,3.10477392666055,3.09843396437821,9.56552812715537,4.30211938490693,1.3599426674155,2.15881276655127,4.54843492213368,2.24013443548668,3.37066608316204,2.38602451609281,1.29893002301434,0.35333957451034,7.32385782838739,5.13305909657271,7.64415719119937,0,1.5154372870785,2.28023878927589,1.01104889002957,5.02409070763864,16.0541487861246,3.11728492036132,3.99016251562112,5.1759131313064,4.15107895060905,3.61734337326294,5.64425794251383,3.26733137457156,4.20231445148436,5.06097749219691,1.76922110389975,3.88240439873782,3.3126227769059,6.30337829075789,0,3.51336956413857,4.60782754989601,3.83185582812887,5.99075622529601,4.19931911695385,5.33694953706872,4.49371918214468,9.60751265919116,8.79580464790051,4.34560800480691,2.30143911597297,2.90903262383384,3.40706652442291,3.7680564624617,4.47865094196335,2.27450482590307,4.20883711772948,6.63614259109789,2.06911893990126,6.12211241338187,5.87748789559289,5.57899293040888,7.68682321709099,4.49768277886698,7.76110112217047,3.88022387279116,5.48407632486676,7.5658983390498,5.04150184583422,8.34141747676794,6.96504333044333,8.64284972913362,5.17489093728082,7.72434506044558,4.88961023517959,2.55747149456033,3.93538967817454,4.22146907965973,5.40186184383045,5.68187365404505,4.9191057936851,6.47921874126989,5.34828072925938,3.75582761959467,4.32031766758527,5.10135534731789,5.74586124276833,5.51267904911819,4.5321996101853,2.63460138349261,2.68412837520744,6.72927835405207,6.89460902941206,4.29544417878937,4.23120906661671,5.54549451391608,4.64473343720877,4.38149368495117,3.83198696784351,4.00280478920767,3.42406127002606,3.79623249235609,2.47048432086016,3.51869292320377,4.17808591286417,4.67913809085888,2.69645822596266,2.59365659849633,2.98711909881551,2.0863469104839,5.1411830674378,5.63538678365402,4.68398054044223,5.04276466635827,3.7873342740772,4.99568643281633,4.13308414342886,3.45397201251025,2.71473760627961,2.66807364378434,4.33797274861845,2.55526693647164,2.69834534861824,2.63718157805054,3.13530307678142,2.80088436959562,4.31544206176216,1.29708181420028,3.29473695825698,8.62609239164127,3.72140947668503,4.68056509671841,3.78868316920668,2.87035861635059,2.41221760681684,4.80358294433172,5.11626811780309,5.70377417547091,6.28056817368196,6.57132695207806,5.3602002381381,4.99891645860629,5.46374214001837,8.98520321405289,7.75126413770712,5.89982644032702,6.22680595919804,5.00786447411097,3.90552458170081,0,0.54390568381871,3.44234991113325,3.31124095565679,2.40825884981688,2.57865710502847,4.91804836130026,2.7771801992481,2.83957397474631,3.12350995437311,6.03185513651837,3.58453196928828,4.45597348164788,5.09537755419898,4.85772842009873,4.09158201075837,9.09161889277004,3.85585579706168,4.11626247103979,4.62970569534864,4.23506094319298,4.94910368917606,5.30980553359851,3.39892890616974,1.51161778482376,4.52652191414155,1.47650946440386,2.76691633149535,3.6179961043551,5.45300594216258,2.85197902707777,3.79244109522979,4.21674434299995,6.18813259489121,7.14923172082955,8.64293251350289,3.62204314591713,4.28674070063185,5.67488747655275,2.14042581122485,6.74650984468696,1.522324745573,4.92810586933792,4.44847348814022,3.52845436887939,13.1909002353184,5.32832608096488,6.09160541774374,3.81991500810037,7.38634048852776,3.20628920292836,2.22510362412612,3.75915937755276,2.68302928352189,6.85219751267933,3.39063222608444,5.74115756428306,3.43167259809784,8.66889992968662,9.37674730568509,8.7065983496787,1.90934123603023,4.9032079005076,6.70954241518601,6.37231510848627,5.85447228840512,6.55087691238533,6.33862428008657,3.55409859618945,1.83229159388821,3.11075935900303,0,2.81846469342095,4.63501292736334,3.64008679005615,3.30567020184881,4.52059382172059,4.56181538825101,3.87278887530988,3.51551839078665,6.08184197669123,3.14059357073808,4.89651010638371,10.7443781013581,3.85177909051312,3.80030541509861,5.97635785697857,8.41425469637163,6.35780335300048,9.49544051207754,7.38447635872886,9.89471209491847,7.46826705218998,8.87270429204197,12.1822350924691,9.1401249558313,11.4539364137938,3.85441652145859,3.32978930061097,2.69141569828427,3.35769232728157,3.28422309854724,4.50437941082837,7.50921659495787,3.85863082342319,2.50786052017682,4.51801474093653,4.60325236507177,5.72895513439397,4.64003592327956,5.48066015816514,5.2877572817279,3.37511250115903,5.85417564191487,5.89085131679466,4.65984280576638,7.78405106881325,4.38927360741134,4.60980735536162,7.29320151204882,5.03071590307158,4.77993121970037,3.55594764482584,7.2112270033613,6.09746498224449,4.54854981174835,8.87177549615839,6.41329560712659,6.367622507952,5.6342134116285,6.08815970929501,6.19181798667996,4.86714168968393,5.01563973205633,5.35711671044299,4.41596760403192,8.22886205724997,6.74408063405482,4.05341522910446,6.83128158171944,5.08190654242785,6.93839784711747,5.48783918618318,5.5244639401947,6.79020569229309,7.85599180320834,5.45721083371201,5.71325997778268,2.04615521584845,6.35241048862461,4.43685205256625,3.74715866906919,2.57324769289949,3.22306581072447,2.29545998482612,5.51478547798789,2.78241402744506
|short_description=p2@Ythdc1
}}
}}

Revision as of 18:37, 18 April 2012

Short description:p2@Ythdc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ythdc1_5end
Coexpression cluster:NA
Association with transcript: 48bp_to_ENSMUST00000120498_5end
EntrezGene:Ythdc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ythdc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.09
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.64
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.06
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I918.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F93.10
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.32
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H916.05
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F18.80
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C96.12
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C65.58
eyeball, neonate N01.CNhs11140.1532-43E77.69
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E27.57
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B58.64
gonad, embryo E13.CNhs11044.1564-45I65.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G15.51
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G16.89
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G73.79
kidney, neonate N10.CNhs11206.758-6D55.00
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B94.68
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F85.70
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I65.00
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E65.90
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C313.19
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H36.09
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.71
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.90
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D55.85
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B86.34
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.80
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G46.36
thymus, neonate N02.CNhs11181.1541-43F89.50
thymus, neonate N03.CNhs11137.2104-43C77.38
thymus, neonate N06.CNhs11197.681-26C49.89
thymus, neonate N07.CNhs11211.713-19D37.47
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A212.18
thymus, neonate N25.CNhs11125.1362-25G79.14
thymus, neonate N30.CNhs11132.1393-42G211.45
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.36
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I87.78
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:87233306..87233322,%2B&oldid=932464"