Personal tools

FFCP PHASE1:Mm9::chr6:113574120..113574158,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:113574120..113574158,+
|short_description=p2@Vhl
|description=CAGE_peak_2_at_Vhl_5end
|association_with_transcript=105bp_to_NM_009507,uc009dha.1_5end
|EntrezGene=22346
|EntrezGene=22346
|HGNC=
|HGNC=
|UniProt=P40338,Q3TTE7
|UniProt=P40338,Q3TTE7
|association_with_transcript=105bp_to_NM_009507,uc009dha.1_5end
|description=CAGE_peak_2_at_Vhl_5end
|id=chr6:113574120..113574158,+
|ontology_enrichment_disease=
|phase1_expression=4.16387002472464,1.74487703819681,3.63999391511629,1.20985684522732,1.00179145989269,1.84667199103079,1.40167584357315,0.645616617207881,1.83025338797167,1.40438715793196,0.513653904676515,1.03703806693937,0.342401459862411,0.437102012094987,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,0.685572168028694,2.54633791078818,2.55129870453209,1.29078236561151,1.56719873483361,2.07990149631429,2.52350209173887,7.46501553349526,2.58457197695445,1.939241094173,3.04037471130198,2.77233142735924,3.10422714917427,2.54012269383853,0.61506478758457,0,0.866554859253824,1.32987716286794,1.02084678131185,2.09265815368454,0,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,1.76255545165808,1.72340783073175,1.83546752161682,1.56478268869608,6.1047043786525,3.29529274101708,4.27745777963423,2.93971485413261,5.75010257459886,2.34895648480831,4.35217285206807,1.68046899571232,3.08711323243136,3.15186783932632,3.6097046459421,5.46254444320914,4.7609188134483,3.1691570175309,2.03306719241479,2.66788438833342,3.5995988691256,0.988866362566974,1.4209602298922,5.69240209984969,8.4528027170742,3.42175720617976,4.05017814995072,2.52389953621658,7.14127461009509,6.84692476950002,2.32732518508413,2.20444583341944,2.75765635983006,2.20231761998777,4.46905683298157,2.4577045320999,5.01167893374737,5.12330804173494,4.16730696445408,4.74611098302348,3.37657566019008,3.81995619442025,5.59794312399969,3.84403538157578,6.33758115806022,0.984440513331393,0.68014404096107,1.73918693221007,0.860423876981386,3.39985666853875,4.31762553310254,1.94932925234301,0.896053774194671,0.983110940922263,3.57903677413921,4.41636207824877,3.88673531961374,1.97180787687353,6.41632387071589,2.54805239706646,0,3.89683873820185,2.78695852022608,4.04419556011827,1.82694207550496,0.776813650941515,2.07818994690755,1.04091196059682,0.304465478312141,1.15307748628029,1.3565037649736,0.823120949949934,1.50799909595611,7.66304399976559,0.86759614151947,0,0.808834249737046,0.883366073841574,0.969750506270444,1.86391761218122,2.34224637609238,2.51336048176146,0.510914110417183,0.718890747035522,0,1.39777249780371,1.79748767285787,3.20250421973039,3.01570445070875,3.82413504423008,4.09144731728529,2.28566849015516,3.89379031362618,2.85150218780886,1.11966273549084,2.0217820674694,1.68353484709179,0.910843100738926,1.83921683546778,0.720248519221397,1.35634336052144,1.36072998302656,0.640568601424249,1.03071897015702,0.258703370739016,1.5089759505299,1.89106080167819,1.23165786914764,1.09597866213787,1.66828349535359,0.348252166522167,0.823128545631774,0.59710280045548,1.40442637462647,0.772043721344145,1.42081749697796,1.44988040774851,0.469052119962192,1.08037236876609,0.946978942340841,0,1.69693824176116,1.16266972375204,1.87791380979733,1.40118410840603,0.16455984991348,1.64167464079095,1.62137619091711,2.19299981137998,0.878200461164203,0.939444931322602,2.3131894342054,3.60166143327496,0.991256348951394,0.264450566663544,0,1.16118335930219,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.823494773620054,1.00534083520108,1.1937388322469,0.974820435595601,0,0.432276099749388,1.39398891278057,2.27601481143698,1.14248512609729,2.25415471346161,1.01825663922657,1.35766741017338,1.33258057791605,1.26473074248515,1.03327103585722,1.8839847340965,1.72756029490521,3.85388415213294,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,1.20588579876208,1.01850340712568,1.72617682470486,1.13494658742525,0.274561413188081,0,1.48856379067401,1.87222603868736,2.27320990152401,1.4351793081753,0.482443521363367,1.84753190166605,1.51593129416388,0.977789858652155,0.339490171550376,2.11221223459652,0.837531287209079,2.61848004974615,1.95133647857799,0.945810864637146,0.8858587585951,0.797273843287435,1.80249646187312,0.863424909329478,1.73578870297814,0,3.26343410291226,1.96705709207614,1.37968373152366,2.88991061978026,1.99259867206745,1.96721934452011,1.26235463602186,2.83957397474631,0.390438744296638,2.36965737506079,1.91175038362042,1.33679204449436,2.83076530788832,2.83367491172426,3.21481443702443,1.18586333383957,4.81981974632711,1.98716119291576,1.6025904330053,2.44330439030364,1.81467135269789,1.32745138339963,0.971122544619926,1.209294227859,1.50884063804718,0.295301892880773,1.84461088766356,1.03371317267288,1.45413491791002,1.42598951353889,0.948110273807448,2.10837217149998,3.09406629744561,1.70219802876894,2.34079422240703,1.55230420539305,1.28602221018955,0.709360934569094,1.42695054081656,0.987294123612726,1.522324745573,1.64270195644597,25.2080164327946,2.64634077665954,0.49465875882444,0.645857706783622,0.844380948994182,0.954978752025092,0.820704498725306,1.45740418314925,4.63563255026274,0.683483523191411,1.23832120777933,0.185194527369712,0.753473828018764,0.136694227721025,0,0.679913719975421,1.11961161858926,0.967399816630967,0.954670618015114,2.05618395827738,1.62655573701479,2.16010681643603,0.627264888043406,1.31017538247707,0.944050424693745,1.40510874733071,1.57053565190418,0.777689839750757,1.86401793926078,7.32800820289447,0.747582730219894,0.827292452285488,1.36115831840833,2.0665571756437,0.844780627453891,1.17357238645754,2.73429208172295,3.46035836604846,3.38217769156408,5.18454011264158,0.632022241256357,1.41907650703115,0.821687657318618,1.16928740680016,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0,0.15241361331,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0.453460767230423,3.55177525398503,2.42227412845584,5.03653849092235,1.35232715822533,2.43987218086537,1.83151624267265,1.71494703263253,4.51414893631827,5.0827665835536,5.52390283808612,2.86447756719698,5.499301834998,6.16574267793578,5.2877572817279,4.05013500139084,3.60256962579376,4.98456649882625,2.07104124700728,1.3492355185943,1.59609949360412,2.04880326904961,1.45864030240976,0.838452650511929,1.10306105070008,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,1.12369808963859,1.21647789569252,1.37845125493472,0.952587382566147,1.39061191133827,2.31491064556446,1.23625770240992,1.32479028120958,1.37147700954166,1.59728225543404,1.1921809497366,0.581385666529314,1.41164070622996,0.592302255241736,1.28049581010941,1.31534855718921,1.08643291076689,0,1.77952527186261,2.75812550651578,0.409231043169689,2.32405261778949,1.35034627686799,2.99772693525535,1.87145286756327,1.71896843238639,0.765153328275374,1.76473135295612,2.78241402744506
|phase1_expression=4.16387002472464,1.74487703819681,3.63999391511629,1.20985684522732,1.00179145989269,1.84667199103079,1.40167584357315,0.645616617207881,1.83025338797167,1.40438715793196,0.513653904676515,1.03703806693937,0.342401459862411,0.437102012094987,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,0.685572168028694,2.54633791078818,2.55129870453209,1.29078236561151,1.56719873483361,2.07990149631429,2.52350209173887,7.46501553349526,2.58457197695445,1.939241094173,3.04037471130198,2.77233142735924,3.10422714917427,2.54012269383853,0.61506478758457,0,0.866554859253824,1.32987716286794,1.02084678131185,2.09265815368454,0,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,1.76255545165808,1.72340783073175,1.83546752161682,1.56478268869608,6.1047043786525,3.29529274101708,4.27745777963423,2.93971485413261,5.75010257459886,2.34895648480831,4.35217285206807,1.68046899571232,3.08711323243136,3.15186783932632,3.6097046459421,5.46254444320914,4.7609188134483,3.1691570175309,2.03306719241479,2.66788438833342,3.5995988691256,0.988866362566974,1.4209602298922,5.69240209984969,8.4528027170742,3.42175720617976,4.05017814995072,2.52389953621658,7.14127461009509,6.84692476950002,2.32732518508413,2.20444583341944,2.75765635983006,2.20231761998777,4.46905683298157,2.4577045320999,5.01167893374737,5.12330804173494,4.16730696445408,4.74611098302348,3.37657566019008,3.81995619442025,5.59794312399969,3.84403538157578,6.33758115806022,0.984440513331393,0.68014404096107,1.73918693221007,0.860423876981386,3.39985666853875,4.31762553310254,1.94932925234301,0.896053774194671,0.983110940922263,3.57903677413921,4.41636207824877,3.88673531961374,1.97180787687353,6.41632387071589,2.54805239706646,0,3.89683873820185,2.78695852022608,4.04419556011827,1.82694207550496,0.776813650941515,2.07818994690755,1.04091196059682,0.304465478312141,1.15307748628029,1.3565037649736,0.823120949949934,1.50799909595611,7.66304399976559,0.86759614151947,0,0.808834249737046,0.883366073841574,0.969750506270444,1.86391761218122,2.34224637609238,2.51336048176146,0.510914110417183,0.718890747035522,0,1.39777249780371,1.79748767285787,3.20250421973039,3.01570445070875,3.82413504423008,4.09144731728529,2.28566849015516,3.89379031362618,2.85150218780886,1.11966273549084,2.0217820674694,1.68353484709179,0.910843100738926,1.83921683546778,0.720248519221397,1.35634336052144,1.36072998302656,0.640568601424249,1.03071897015702,0.258703370739016,1.5089759505299,1.89106080167819,1.23165786914764,1.09597866213787,1.66828349535359,0.348252166522167,0.823128545631774,0.59710280045548,1.40442637462647,0.772043721344145,1.42081749697796,1.44988040774851,0.469052119962192,1.08037236876609,0.946978942340841,0,1.69693824176116,1.16266972375204,1.87791380979733,1.40118410840603,0.16455984991348,1.64167464079095,1.62137619091711,2.19299981137998,0.878200461164203,0.939444931322602,2.3131894342054,3.60166143327496,0.991256348951394,0.264450566663544,0,1.16118335930219,1.54640953586512,0.201683524623343,0.444756087689741,0.570676878337677,0.949058123089023,0.823494773620054,1.00534083520108,1.1937388322469,0.974820435595601,0,0.432276099749388,1.39398891278057,2.27601481143698,1.14248512609729,2.25415471346161,1.01825663922657,1.35766741017338,1.33258057791605,1.26473074248515,1.03327103585722,1.8839847340965,1.72756029490521,3.85388415213294,0.166845105716094,0.393117990226406,0.674586337154561,0.405720242777006,1.20588579876208,1.01850340712568,1.72617682470486,1.13494658742525,0.274561413188081,0,1.48856379067401,1.87222603868736,2.27320990152401,1.4351793081753,0.482443521363367,1.84753190166605,1.51593129416388,0.977789858652155,0.339490171550376,2.11221223459652,0.837531287209079,2.61848004974615,1.95133647857799,0.945810864637146,0.8858587585951,0.797273843287435,1.80249646187312,0.863424909329478,1.73578870297814,0,3.26343410291226,1.96705709207614,1.37968373152366,2.88991061978026,1.99259867206745,1.96721934452011,1.26235463602186,2.83957397474631,0.390438744296638,2.36965737506079,1.91175038362042,1.33679204449436,2.83076530788832,2.83367491172426,3.21481443702443,1.18586333383957,4.81981974632711,1.98716119291576,1.6025904330053,2.44330439030364,1.81467135269789,1.32745138339963,0.971122544619926,1.209294227859,1.50884063804718,0.295301892880773,1.84461088766356,1.03371317267288,1.45413491791002,1.42598951353889,0.948110273807448,2.10837217149998,3.09406629744561,1.70219802876894,2.34079422240703,1.55230420539305,1.28602221018955,0.709360934569094,1.42695054081656,0.987294123612726,1.522324745573,1.64270195644597,25.2080164327946,2.64634077665954,0.49465875882444,0.645857706783622,0.844380948994182,0.954978752025092,0.820704498725306,1.45740418314925,4.63563255026274,0.683483523191411,1.23832120777933,0.185194527369712,0.753473828018764,0.136694227721025,0,0.679913719975421,1.11961161858926,0.967399816630967,0.954670618015114,2.05618395827738,1.62655573701479,2.16010681643603,0.627264888043406,1.31017538247707,0.944050424693745,1.40510874733071,1.57053565190418,0.777689839750757,1.86401793926078,7.32800820289447,0.747582730219894,0.827292452285488,1.36115831840833,2.0665571756437,0.844780627453891,1.17357238645754,2.73429208172295,3.46035836604846,3.38217769156408,5.18454011264158,0.632022241256357,1.41907650703115,0.821687657318618,1.16928740680016,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0,0.15241361331,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0.453460767230423,3.55177525398503,2.42227412845584,5.03653849092235,1.35232715822533,2.43987218086537,1.83151624267265,1.71494703263253,4.51414893631827,5.0827665835536,5.52390283808612,2.86447756719698,5.499301834998,6.16574267793578,5.2877572817279,4.05013500139084,3.60256962579376,4.98456649882625,2.07104124700728,1.3492355185943,1.59609949360412,2.04880326904961,1.45864030240976,0.838452650511929,1.10306105070008,0.666740183404846,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,0.565879024158229,1.12369808963859,1.21647789569252,1.37845125493472,0.952587382566147,1.39061191133827,2.31491064556446,1.23625770240992,1.32479028120958,1.37147700954166,1.59728225543404,1.1921809497366,0.581385666529314,1.41164070622996,0.592302255241736,1.28049581010941,1.31534855718921,1.08643291076689,0,1.77952527186261,2.75812550651578,0.409231043169689,2.32405261778949,1.35034627686799,2.99772693525535,1.87145286756327,1.71896843238639,0.765153328275374,1.76473135295612,2.78241402744506
|short_description=p2@Vhl
}}
}}

Revision as of 18:59, 18 April 2012

Short description:p2@Vhl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vhl_5end
Coexpression cluster:NA
Association with transcript: 105bp_to_NM_009507, uc009dha.1_5end
EntrezGene:Vhl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vhl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.69
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.02
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.89
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I71.99
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G325.21
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:113574120..113574158,%2B&oldid=935879"