Personal tools

FFCP PHASE1:Mm9::chr3:88352186..88352233,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Rab25_5end
|description=CAGE_peak_1_at_Rab25_5end
|id=chr3:88352186..88352233,-
|id=chr3:88352186..88352233,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=38.5958721522553,118.302663189743,102.829828102035,52.6287727673884,62.6119662432934,136.653727336278,148.577639418754,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3634199468316,0,0,193.270846734435,166.321728773698,140.68683120818,165.412606525085,189.830155996268,233.158735672971,153.234318894038,198.448807036498,0,0,0,200.174172487633,213.279049994946,198.452614287023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.15279824777681,0.883885756421003,0.569486723196412,0,0.37863096666592,0.151143120213571,20.5803786978191,0.860423876981386,0,0,0.649776417447669,0.448026887097336,38.0604378557048,0,0,0,72.9568914443205,0,0,0,154.358112240996,144.415123320806,136.491600153991,43.0473226540856,0,0,0.173485326766136,0.913396434936424,2.07553947530453,0,0.352766121407114,0,3.21353458054686,0,0,0,0,0,281.451559439364,0.292780797011547,0.209446706813455,230.933177908567,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,12.0170449343373,28.3647892991012,148.348259200567,102.906067528486,2.47228841629137,3.21862946206862,7.20248519221397,20.1944455899858,5.8511389270142,5.63700369253339,6.74652416830048,51.2232674063251,4.74249584452253,2.45837904218165,7.38994721488585,27.1802708210193,117.892033671654,192.583448086758,230.681774913305,1.59227413454795,0,0,0,0,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,1.3413670069981,0.350296027101508,0,0,0,0,0,0,0,0,171.156929585607,185.379847231145,12.797295032114,12.7730169523241,56.0573456751106,96.8080918192044,112.745668229349,154.843659655623,147.578538140343,147.076166568542,147.031097148158,154.788135248015,138.034573680337,177.067423504882,217.434878173942,212.48373856241,12.7077493638565,10.6251116727048,15.7790829942313,21.5870407516033,25.2138233317913,21.5316967063278,30.6697205052648,47.6780777974115,45.2156336183159,44.6697733396918,2.07516838961004,0.83422552858047,0.982794975566015,0.224862112384854,0,0,5.85639459097266,4.31544206176216,0.324270453550071,1.37280706594041,2.87536413054709,2.23284568601102,3.74445207737473,1.01031551178845,1.61457672169721,0.482443521363367,54.1326847188152,7.01118223550794,17.7631824321808,22.4063513223248,43.6523861816614,89.2808352164878,117.355514956805,65.3697720323626,35.1526371356806,36.7631384816966,31.2531346568675,68.0032756070313,39.0268059016924,45.8537515703392,0,0,108.188140064188,92.7147467583901,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,24.4136946558222,14.4233138970477,9.44744364250741,59.7191845160578,80.9745343873773,85.4587839265535,87.6738315197778,123.536327240113,121.664379866878,83.9297953886922,58.9216508423544,50.5311883973733,54.9005962712471,65.1035721347781,91.7141894602489,63.9440368138758,115.06858674478,17.1058039329745,40.7479853915677,50.3692032324242,41.3202744386497,45.8407861237321,41.9600002535408,63.6331743649513,4.22409074514679,1.69465656691056,246.771277423502,168.348864253251,191.012416781256,173.821849642945,299.266466415863,304.973791726324,142.242648275367,0,0,10.3193433981611,0.925972636848558,0,0,0,0,0,0,480.199320861602,8.38290382990009,63.2323542764499,135.438697390539,243.587864856856,272.734842118976,249.094447772764,185.887621926281,304.68391646941,176.794823570005,180.809740108295,0,0,0.66183396182839,4.86127970860119,4.90807329215378,4.22390313726945,3.75543163666413,3.6457227756306,0.419437377702843,0.724752362478018,2.01621004380506,4.4241556887945,7.50083296573608,4.72470402958205,3.37794139742267,4.11761400035207,4.76835251475036,2.76449533895928,1.47689527174577,3.63479219813331,2.13379058634,2.11734988787365,3.21611006441183,2.21287235772758,1.28564592399726,492.458393212239,0.665957860122194,0,0.167884616364078,184.109683112677,84.2694314775807,169.232100822953,410.944182694569,264.830070930672,0,0,0,0,0,0,0,0,0,0,2.90604573235695,2.79317411380722,6.31714341290296,43.2729956381563,25.9920321658698,41.9163199266032,23.113659691368,22.6638562962784,21.1806678330598,23.2481434822694,21.7992197905606,22.257908283557,17.8855279267475,17.3508163017196,14.9906573974151,12.3836359733599,13.6743504614929,12.9249177710682,16.8955219329356,18.1054671765309,26.400932433677,22.1844757699172,15.0214799666812,17.8776092457764,18.6336573222355,16.4152339309852,16.6464455314223,20.2563677807139,14.3952360676613,30.3016826695179,17.2020776280052,12.8055827088233,12.6861623382604,16.2683683245264,77.7413642254,110.416275448572,73.2205934434128,80.1469031600153,29.8409798027396,49.191886463652,5.56482805489012
|phase1_expression=38.5958721522553,118.302663189743,102.829828102035,52.6287727673884,62.6119662432934,136.653727336278,148.577639418754,0,0,0,0,0,0,0,0,0,0,0,0,0,26.3634199468316,0,0,193.270846734435,166.321728773698,140.68683120818,165.412606525085,189.830155996268,233.158735672971,153.234318894038,198.448807036498,0,0,0,200.174172487633,213.279049994946,198.452614287023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0,0,1.10115880999389,0.383062014255563,0.768032666281217,0,0,0,0.558365998002762,1.12552522006336,0.15279824777681,0.883885756421003,0.569486723196412,0,0.37863096666592,0.151143120213571,20.5803786978191,0.860423876981386,0,0,0.649776417447669,0.448026887097336,38.0604378557048,0,0,0,72.9568914443205,0,0,0,154.358112240996,144.415123320806,136.491600153991,43.0473226540856,0,0,0.173485326766136,0.913396434936424,2.07553947530453,0,0.352766121407114,0,3.21353458054686,0,0,0,0,0,281.451559439364,0.292780797011547,0.209446706813455,230.933177908567,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,12.0170449343373,28.3647892991012,148.348259200567,102.906067528486,2.47228841629137,3.21862946206862,7.20248519221397,20.1944455899858,5.8511389270142,5.63700369253339,6.74652416830048,51.2232674063251,4.74249584452253,2.45837904218165,7.38994721488585,27.1802708210193,117.892033671654,192.583448086758,230.681774913305,1.59227413454795,0,0,0,0,0.938104239924385,0.180062061461015,0.473489471170421,0.196764231747404,0.617068451549513,0.697601834251224,1.3413670069981,0.350296027101508,0,0,0,0,0,0,0,0,171.156929585607,185.379847231145,12.797295032114,12.7730169523241,56.0573456751106,96.8080918192044,112.745668229349,154.843659655623,147.578538140343,147.076166568542,147.031097148158,154.788135248015,138.034573680337,177.067423504882,217.434878173942,212.48373856241,12.7077493638565,10.6251116727048,15.7790829942313,21.5870407516033,25.2138233317913,21.5316967063278,30.6697205052648,47.6780777974115,45.2156336183159,44.6697733396918,2.07516838961004,0.83422552858047,0.982794975566015,0.224862112384854,0,0,5.85639459097266,4.31544206176216,0.324270453550071,1.37280706594041,2.87536413054709,2.23284568601102,3.74445207737473,1.01031551178845,1.61457672169721,0.482443521363367,54.1326847188152,7.01118223550794,17.7631824321808,22.4063513223248,43.6523861816614,89.2808352164878,117.355514956805,65.3697720323626,35.1526371356806,36.7631384816966,31.2531346568675,68.0032756070313,39.0268059016924,45.8537515703392,0,0,108.188140064188,92.7147467583901,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,24.4136946558222,14.4233138970477,9.44744364250741,59.7191845160578,80.9745343873773,85.4587839265535,87.6738315197778,123.536327240113,121.664379866878,83.9297953886922,58.9216508423544,50.5311883973733,54.9005962712471,65.1035721347781,91.7141894602489,63.9440368138758,115.06858674478,17.1058039329745,40.7479853915677,50.3692032324242,41.3202744386497,45.8407861237321,41.9600002535408,63.6331743649513,4.22409074514679,1.69465656691056,246.771277423502,168.348864253251,191.012416781256,173.821849642945,299.266466415863,304.973791726324,142.242648275367,0,0,10.3193433981611,0.925972636848558,0,0,0,0,0,0,480.199320861602,8.38290382990009,63.2323542764499,135.438697390539,243.587864856856,272.734842118976,249.094447772764,185.887621926281,304.68391646941,176.794823570005,180.809740108295,0,0,0.66183396182839,4.86127970860119,4.90807329215378,4.22390313726945,3.75543163666413,3.6457227756306,0.419437377702843,0.724752362478018,2.01621004380506,4.4241556887945,7.50083296573608,4.72470402958205,3.37794139742267,4.11761400035207,4.76835251475036,2.76449533895928,1.47689527174577,3.63479219813331,2.13379058634,2.11734988787365,3.21611006441183,2.21287235772758,1.28564592399726,492.458393212239,0.665957860122194,0,0.167884616364078,184.109683112677,84.2694314775807,169.232100822953,410.944182694569,264.830070930672,0,0,0,0,0,0,0,0,0,0,2.90604573235695,2.79317411380722,6.31714341290296,43.2729956381563,25.9920321658698,41.9163199266032,23.113659691368,22.6638562962784,21.1806678330598,23.2481434822694,21.7992197905606,22.257908283557,17.8855279267475,17.3508163017196,14.9906573974151,12.3836359733599,13.6743504614929,12.9249177710682,16.8955219329356,18.1054671765309,26.400932433677,22.1844757699172,15.0214799666812,17.8776092457764,18.6336573222355,16.4152339309852,16.6464455314223,20.2563677807139,14.3952360676613,30.3016826695179,17.2020776280052,12.8055827088233,12.6861623382604,16.2683683245264,77.7413642254,110.416275448572,73.2205934434128,80.1469031600153,29.8409798027396,49.191886463652,5.56482805489012
|short_description=p1@Rab25
|short_description=p1@Rab25
}}
}}

Revision as of 19:33, 18 April 2012

Short description:p1@Rab25
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab25_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000008745, ENSMUST00000149724, NM_016899, uc008pvn.1_5end
EntrezGene:Rab25
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab25

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5118.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6102.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I352.63
CD326+ enterocyte, pool2.CNhs13197.11849-124I462.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7136.65
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8148.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1193.27
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2166.32
GP2+ M cell, pool1.CNhs13228.11845-124H9140.69
GP2+ M cell, pool2.CNhs13231.11846-124I1165.41
GP2+ M cell, pool3.CNhs13240.11847-124I2189.83
Ileum epithelium, pool1.CNhs13199.10252-104B9233.16
Ileum epithelium, pool2.CNhs13232.10253-104C1153.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8198.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5200.17
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6213.28
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7198.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.06
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G672.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1154.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2144.42
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3136.49
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.05
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A83.21
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H4281.45
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H7230.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.36
epididymis, adult.CNhs10490.58-23B2148.35
eyeball, adult.CNhs10484.31-12G4102.91
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D420.19
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A251.22
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A827.18
forelimb, embryo E15.CNhs11007.437-20E7117.89
forelimb, embryo E17.CNhs10598.1517-43C4192.58
forelimb, embryo E18.CNhs11008.1520-43B5230.68
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3171.16
intestine, adult.CNhs10496.178-9A3185.38
intestine, embryo E12.CNhs11019.1251-16I512.80
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D856.06
intestine, embryo E16.CNhs10585.463-22H496.81
intestine, embryo E17.CNhs10582.482-18D3112.75
intestine, embryo E18.CNhs10526.1289-20F7154.84
intestine, neonate N00.CNhs11126.644-26D1147.58
intestine, neonate N01.CNhs11192.1322-23E9147.08
intestine, neonate N06.CNhs11102.688-20B8147.03
intestine, neonate N07.CNhs11095.720-20F2154.79
intestine, neonate N10.CNhs11098.755-23A5138.03
intestine, neonate N20.CNhs11187.827-18D1177.07
intestine, neonate N25.CNhs11121.1352-25E3217.43
intestine, neonate N30.CNhs11131.1384-42G1212.48
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F810.63
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I221.59
kidney, embryo E18.CNhs11001.1288-20C725.21
kidney, neonate N00.CNhs11214.646-21G721.53
kidney, neonate N10.CNhs11206.758-6D530.67
kidney, neonate N20.CNhs11113.832-19I147.68
kidney, neonate N25.CNhs11122.1353-25F345.22
kidney, neonate N30.CNhs11203.1385-42H144.67
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B154.13
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F817.76
lung, embryo E15.CNhs11020.432-17C522.41
lung, embryo E16.CNhs10998.458-17B643.65
lung, embryo E17.CNhs10605.480-44A689.28
lung, embryo E18.CNhs10583.1287-20I6117.36
lung, neonate N00.CNhs11224.640-42C665.37
lung, neonate N06.CNhs11212.683-20E535.15
lung, neonate N07.CNhs11111.715-19A336.76
lung, neonate N10.CNhs11219.750-23E631.25
lung, neonate N20.CNhs11109.822-18A468.00
lung, neonate N25.CNhs11119.1359-25C739.03
lung, neonate N30.CNhs11133.1394-42H245.85
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B6108.19
mammary gland, adult pregnant day19.CNhs10476.588-5H292.71
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I724.41
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G659.72
pancreas, adult.CNhs10486.34-16E480.97
pancreas, embryo E14.CNhs11012.405-44F485.46
pancreas, embryo E15.CNhs11042.1556-45F287.67
pancreas, embryo E16.CNhs11003.460-26E5123.54
pancreas, embryo E17.CNhs10599.1558-45G3121.66
pancreas, embryo E18.CNhs10580.1535-43I783.93
pancreas, neonate N00.CNhs11105.645-26G958.92
pancreas, neonate N01.CNhs11138.1531-43D750.53
pancreas, neonate N02.CNhs11139.1539-43D854.90
pancreas, neonate N16.CNhs11136.787-43B665.10
pancreas, neonate N25.CNhs11094.1555-45E291.71
pancreas, neonate N30.CNhs11182.1548-44H563.94
pituitary gland, adult.CNhs10493.21-1G8115.07
pituitary gland, embryo E12.CNhs11018.346-16E617.11
pituitary gland, embryo E13.CNhs11009.370-44C740.75
pituitary gland, embryo E14.CNhs11037.398-44A550.37
pituitary gland, embryo E15.CNhs10592.427-16B941.32
pituitary gland, embryo E16.CNhs11036.449-43F645.84
pituitary gland, embryo E17.CNhs11039.1265-44F541.96
pituitary gland, neonate N00.CNhs11190.1308-22E963.63
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F8246.77
skin, adult.CNhs10492.30-1C3168.35
skin, neonate N00.CNhs11124.650-25G4191.01
skin, neonate N03.CNhs11215.662-22H3173.82
skin, neonate N06.CNhs11097.693-20I5299.27
skin, neonate N10.CNhs11108.762-6C4304.97
small intestine, neonate N16.CNhs11114.790-21I1142.24
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C110.32
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H6480.20
stomach, embryo E12.CNhs10588.356-43E38.38
stomach, embryo E15.CNhs10603.1252-16G863.23
stomach, embryo E16.CNhs11022.459-17D4135.44
stomach, embryo E17.CNhs11006.1035-18D5243.59
stomach, embryo E18.CNhs10999.1286-20C6272.73
stomach, neonate N03.CNhs11193.1340-24B8249.09
stomach, neonate N07.CNhs11210.718-18A9185.89
stomach, neonate N25.CNhs11104.1355-25E4304.68
stomach, neonate N30.CNhs11134.1386-42I1176.79
submandibular gland, adult.CNhs10469.59-29C1180.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D32.13
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B4492.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E4184.11
uterus, adult pregnant day19.CNhs10497.590-15F584.27
uterus, adult.CNhs10509.92-27E5169.23
vagina, adult.CNhs10502.89-27D5410.94
vesicular gland, adult.CNhs10491.51-27F8264.83
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D243.27
whole body, embryo E14.CNhs10519.395-14B125.99
whole body, embryo E16.CNhs10514.453-14F241.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.18
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G522.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G522.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G520.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.27
whole body, embryo E17.5.CNhs10513.490-9F977.74
whole body, embryo E17.CNhs10517.475-3I5110.42
whole body, embryo E18.CNhs10516.493-3B373.22
whole body, neonate N00.CNhs10525.657-19C280.15
whole body, neonate N01.CNhs10576.659-23C629.84
whole body, neonate N06.CNhs10515.692-21D149.19
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:88352186..88352233,-&oldid=940900"