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FFCP PHASE1:Mm9::chr4:116828680..116828690,-: Difference between revisions

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|description=CAGE_peak_1_at_Gm10712_5end,CAGE_peak_1_at_Gm14438_5end,CAGE_peak_1_at_Gm15501_5end,CAGE_peak_1_at_Rps8_5end
|description=CAGE_peak_1_at_Gm10712_5end,CAGE_peak_1_at_Gm14438_5end,CAGE_peak_1_at_Gm15501_5end,CAGE_peak_1_at_Rps8_5end
|id=chr4:116828680..116828690,-
|id=chr4:116828680..116828690,-
|ontology_enrichment_celltype=CL:0000988!3.81e-10!32;CL:0002032!3.81e-10!32;CL:0000037!3.81e-10!32;CL:0000566!3.81e-10!32;CL:0000837!3.81e-10!32;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000838!2.64e-08!12;CL:0000084!1.24e-07!11;CL:0000827!1.24e-07!11;CL:0002031!2.28e-07!25;CL:0000791!2.71e-07!9;CL:0000789!2.71e-07!9;CL:0002420!2.71e-07!9;CL:0002419!2.71e-07!9;CL:0000790!2.71e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=13.1322054625931,4.18770489167233,7.73498706962211,3.93203474698879,3.00537437967808,6.71517087647559,5.60670337429262,10.0716192284429,30.2695752626083,30.4283884218592,9.93064215707929,16.9116977070113,7.70403284690426,13.8124235822016,5.3297561890506,3.84703008040669,4.19737126876888,6.46697438984387,4.52477630898938,7.21462408056651,3.31668831589172,5.85816612085223,3.91799683708403,1.11994695955385,2.75291137280604,3.44539178469012,6.8921919385452,4.52489588640367,1.90023419456374,4.28451220591882,4.8780712344167,15.2407361630311,11.6862309641068,0,12.1317680295535,9.64160943079256,18.5794114198756,4.60384793810598,2.3440060335714,2.61761871986899,3.52938892818609,8.19654581950135,6.79714494243615,1.76255545165808,2.53442328048786,2.56965453026354,2.34717403304412,0.65407546914134,1.5378032791413,0.194429899074283,1.39986421625363,1.43752564364972,15.939347575485,14.5072428402269,12.7715643674136,2.82985379639542,2.29226751951005,3.09403255366465,3.03474691289397,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,1.19840044207362,2.68952813725088,1.76272340924412,2.70011876663381,1.47227472945967,3.42781181284564,3.09215957332259,1.10241719293459,2.30029130443767,1.83843757322004,1.10115880999389,1.91531007127782,0.768032666281217,2.1101806036831,1.64677758484337,2.6045668527838,2.23346399201105,0.56276261003168,2.75036845998258,1.47314292736834,1.99320353118744,2.42319279572891,3.48340489332647,1.5870027622425,5.2175607966302,2.58127163094416,4.0798280022465,1.07940638327563,0.649776417447669,1.79210754838934,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,9.57735254481427,0,0,0,2.38140145112336,2.53359865475099,3.0331466700887,1.82694207550496,1.8125651855302,1.7813056687779,4.3371331691534,4.56698217468212,2.53677046981664,3.3158980921577,4.11560474974967,2.89033160058254,1.73036477414062,1.73519228303894,1.76922110389975,2.42650274921114,1.76673214768315,0.969750506270444,0,3.51336956413857,5.86450779077674,2.04365644166873,8.50687383992034,9.59844369589452,7.11593271609162,2.54644086988199,2.28750301409313,4.64921102817598,2.43354048269187,2.81287003063364,2.0778804455956,2.59586020908412,5.29564692021645,2.73695335342205,2.0217820674694,1.89397670297827,3.90361328888111,3.67843367093557,4.86167750474443,3.76762044589288,5.30684693380357,5.38077625196369,4.68508622798644,3.3631438196072,2.80238390812695,3.40390944302075,3.34307135911503,4.60311038097907,4.72680323683516,4.87553033131033,4.11564272815887,5.9710280045548,4.91549231119264,4.11756651383544,8.24074148247219,3.10688658803253,4.22146907965973,3.24111710629827,4.26140524053378,2.36117078096885,2.62254091908543,3.95307706075693,2.14618721119695,2.33530684734339,2.79751744852917,2.29834449710733,3.16168357228837,3.21639972335731,1.3173006917463,1.74468344388483,1.89260953707715,3.70456604565424,0.991256348951394,2.64450566663544,4.26576501070468,5.10920678092965,2.83508414908605,2.21851877085677,4.00280478920767,3.23383564391351,1.89811624617805,3.29397909448022,3.2673577144035,2.78539060857611,2.53453313254856,5.39291645192533,2.16138049874694,2.19055400579804,5.50036912763937,5.9409226557059,1.1270773567308,2.24016460629846,4.07300223052014,5.04977903210294,3.09859031908861,3.39503340353085,2.66897837330337,1.97435462274881,1.77871576252289,3.17005700860579,2.55526693647164,2.69834534861824,2.02860121388503,3.61765739628625,2.03700681425136,2.5892652370573,3.56697498905078,2.19649130550465,1.43768206527355,2.97712758134803,3.12037673114561,2.77836765741823,2.69096120282868,1.92977408545347,1.66277871149944,3.97931964718018,3.09633455239849,5.60158783058121,3.75504397261603,2.68010011906905,3.33261097240419,5.07347484430277,2.04925687338048,4.20782910332672,3.6674596791222,4.09658286789345,2.59027472798843,5.06271705035291,4.52373851817817,1.08781136763742,0.983528546038072,5.24279817978992,1.76605648986571,3.16471553798949,0.655739781506702,1.51482556322624,5.36363973007636,3.12350995437311,3.23135096599198,2.15071918157297,2.22798674082394,3.11384183867716,2.02405350837447,2.63030272120181,1.97643888973262,1.92792789853084,2.55492153374884,5.1639025063504,5.86393053672874,2.96946221350564,2.65490276679926,4.61283208694465,3.93020624054176,6.97838795096823,3.54362271456927,2.76691633149535,5.94385074286909,5.08947221268508,4.27796854061666,4.42451461110142,4.21674434299995,7.21948802737308,3.74483566329167,4.14140516272013,3.88076051348264,3.42939256050548,3.3694644392032,4.63758925765383,3.62007845324666,4.56697423671899,1.40803024838226,1.90648863777438,3.08739757276947,3.2977250588296,3.22928853391811,4.82503399425247,4.05865969610664,2.9545361954111,2.04036585640896,1.29797711407357,2.22132145037209,4.74689796315412,3.51869602002452,3.57900068308913,5.33107488111998,4.11800711771741,8.83887835968048,9.09684440103777,9.12119827109197,2.86401185404534,3.00519193902079,2.84647253977588,4.10420295122845,4.80903080833278,3.05707589244649,3.9110660451598,3.80205896336545,1.30877970992015,2.33306951925227,1.86401793926078,0.56369293868419,3.73791365109947,4.79829622325583,4.4723773319131,5.55387240954244,5.06868376472335,5.8678619322877,5.7289929331338,4.29923312145414,1.44950472495604,1.44015003128933,1.58005560314089,3.24360344464263,5.6491026440655,3.76770386635606,3.75956060901711,1.58945083825012,3.846254384639,3.83992770653901,4.64445669761479,5.25826965919499,5.14213544197887,3.50848370663109,6.5424052315424,6.07759891344159,1.58711268530648,1.55390167361845,3.49884040776955,3.18980771091749,1.54551675225752,2.62755465631655,2.38097111547445,2.78678892802786,4.01257683228291,1.12950368523413,0.920650473014354,2.86447756719698,2.40594455281163,2.05524755931193,2.2661816921691,1.35004500046361,0.45032120322422,0.906284817968409,1.03552062350364,2.07574695168353,3.19219898720825,4.26834014385335,3.16038732188782,1.67690530102386,1.47074806760011,2.22246727801615,2.88449080134452,3.85103051510178,1.76888048234658,1.2673964994512,2.07488975524684,4.21386783614471,3.84150914429216,3.21638626151434,3.81034953026459,2.78122382267653,3.8581844092741,1.64834360321323,1.32479028120958,3.42869252385415,3.54951612318675,2.62279808942053,2.0348498328526,1.69396884747595,3.38458431566706,2.92684756596436,2.63069711437843,3.93831930152999,1.12228454331548,2.01679530811096,2.9551344712669,2.86461730218783,3.09873682371932,4.62975866354739,3.2475375131933,1.87145286756327,1.93383948643468,4.97349663378993,2.8676884485537,2.08681052058379
|phase1_expression=13.1322054625931,4.18770489167233,7.73498706962211,3.93203474698879,3.00537437967808,6.71517087647559,5.60670337429262,10.0716192284429,30.2695752626083,30.4283884218592,9.93064215707929,16.9116977070113,7.70403284690426,13.8124235822016,5.3297561890506,3.84703008040669,4.19737126876888,6.46697438984387,4.52477630898938,7.21462408056651,3.31668831589172,5.85816612085223,3.91799683708403,1.11994695955385,2.75291137280604,3.44539178469012,6.8921919385452,4.52489588640367,1.90023419456374,4.28451220591882,4.8780712344167,15.2407361630311,11.6862309641068,0,12.1317680295535,9.64160943079256,18.5794114198756,4.60384793810598,2.3440060335714,2.61761871986899,3.52938892818609,8.19654581950135,6.79714494243615,1.76255545165808,2.53442328048786,2.56965453026354,2.34717403304412,0.65407546914134,1.5378032791413,0.194429899074283,1.39986421625363,1.43752564364972,15.939347575485,14.5072428402269,12.7715643674136,2.82985379639542,2.29226751951005,3.09403255366465,3.03474691289397,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,1.3498495759221,0,0.7104801149461,1.19840044207362,2.68952813725088,1.76272340924412,2.70011876663381,1.47227472945967,3.42781181284564,3.09215957332259,1.10241719293459,2.30029130443767,1.83843757322004,1.10115880999389,1.91531007127782,0.768032666281217,2.1101806036831,1.64677758484337,2.6045668527838,2.23346399201105,0.56276261003168,2.75036845998258,1.47314292736834,1.99320353118744,2.42319279572891,3.48340489332647,1.5870027622425,5.2175607966302,2.58127163094416,4.0798280022465,1.07940638327563,0.649776417447669,1.79210754838934,1.54488862144927,2.21559419351475,2.33807404142582,2.47337702157238,9.57735254481427,0,0,0,2.38140145112336,2.53359865475099,3.0331466700887,1.82694207550496,1.8125651855302,1.7813056687779,4.3371331691534,4.56698217468212,2.53677046981664,3.3158980921577,4.11560474974967,2.89033160058254,1.73036477414062,1.73519228303894,1.76922110389975,2.42650274921114,1.76673214768315,0.969750506270444,0,3.51336956413857,5.86450779077674,2.04365644166873,8.50687383992034,9.59844369589452,7.11593271609162,2.54644086988199,2.28750301409313,4.64921102817598,2.43354048269187,2.81287003063364,2.0778804455956,2.59586020908412,5.29564692021645,2.73695335342205,2.0217820674694,1.89397670297827,3.90361328888111,3.67843367093557,4.86167750474443,3.76762044589288,5.30684693380357,5.38077625196369,4.68508622798644,3.3631438196072,2.80238390812695,3.40390944302075,3.34307135911503,4.60311038097907,4.72680323683516,4.87553033131033,4.11564272815887,5.9710280045548,4.91549231119264,4.11756651383544,8.24074148247219,3.10688658803253,4.22146907965973,3.24111710629827,4.26140524053378,2.36117078096885,2.62254091908543,3.95307706075693,2.14618721119695,2.33530684734339,2.79751744852917,2.29834449710733,3.16168357228837,3.21639972335731,1.3173006917463,1.74468344388483,1.89260953707715,3.70456604565424,0.991256348951394,2.64450566663544,4.26576501070468,5.10920678092965,2.83508414908605,2.21851877085677,4.00280478920767,3.23383564391351,1.89811624617805,3.29397909448022,3.2673577144035,2.78539060857611,2.53453313254856,5.39291645192533,2.16138049874694,2.19055400579804,5.50036912763937,5.9409226557059,1.1270773567308,2.24016460629846,4.07300223052014,5.04977903210294,3.09859031908861,3.39503340353085,2.66897837330337,1.97435462274881,1.77871576252289,3.17005700860579,2.55526693647164,2.69834534861824,2.02860121388503,3.61765739628625,2.03700681425136,2.5892652370573,3.56697498905078,2.19649130550465,1.43768206527355,2.97712758134803,3.12037673114561,2.77836765741823,2.69096120282868,1.92977408545347,1.66277871149944,3.97931964718018,3.09633455239849,5.60158783058121,3.75504397261603,2.68010011906905,3.33261097240419,5.07347484430277,2.04925687338048,4.20782910332672,3.6674596791222,4.09658286789345,2.59027472798843,5.06271705035291,4.52373851817817,1.08781136763742,0.983528546038072,5.24279817978992,1.76605648986571,3.16471553798949,0.655739781506702,1.51482556322624,5.36363973007636,3.12350995437311,3.23135096599198,2.15071918157297,2.22798674082394,3.11384183867716,2.02405350837447,2.63030272120181,1.97643888973262,1.92792789853084,2.55492153374884,5.1639025063504,5.86393053672874,2.96946221350564,2.65490276679926,4.61283208694465,3.93020624054176,6.97838795096823,3.54362271456927,2.76691633149535,5.94385074286909,5.08947221268508,4.27796854061666,4.42451461110142,4.21674434299995,7.21948802737308,3.74483566329167,4.14140516272013,3.88076051348264,3.42939256050548,3.3694644392032,4.63758925765383,3.62007845324666,4.56697423671899,1.40803024838226,1.90648863777438,3.08739757276947,3.2977250588296,3.22928853391811,4.82503399425247,4.05865969610664,2.9545361954111,2.04036585640896,1.29797711407357,2.22132145037209,4.74689796315412,3.51869602002452,3.57900068308913,5.33107488111998,4.11800711771741,8.83887835968048,9.09684440103777,9.12119827109197,2.86401185404534,3.00519193902079,2.84647253977588,4.10420295122845,4.80903080833278,3.05707589244649,3.911066045159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|short_description=p1@Gm10712,p1@Gm14438,p1@Gm15501,p1@Rps8
|short_description=p1@Gm10712,p1@Gm14438,p1@Gm15501,p1@Rps8
}}
}}

Revision as of 20:12, 18 April 2012

Short description:p1@Gm10712, p1@Gm14438, p1@Gm15501, p1@Rps8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm10712_5end, CAGE_peak_1_at_Gm14438_5end, CAGE_peak_1_at_Gm15501_5end, CAGE_peak_1_at_Rps8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000140226_5end
EntrezGene:100040298,100043763,100502877,20116
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm10712p1@Gm14438p1@Gm15501p1@Rps8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E730.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F230.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.32
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.86
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I16.89
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.94
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.77
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.51
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C65.31
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.62
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.70
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D53.10
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.10
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H34.83
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.12
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D44.10
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C63.06
stomach, neonate N03.CNhs11193.1340-24B83.91
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.33
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C54.80
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I55.55
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B75.87
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I25.65
thymus, embryo E16.CNhs11002.456-26C53.77
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F83.85
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D35.26
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.97
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.09





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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