Personal tools

FFCP PHASE1:Mm9::chr6:8728106..8728162,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:8728106..8728162,-
|short_description=p1@Ica1
|description=CAGE_peak_1_at_Ica1_5end
|association_with_transcript=0bp_to_ENSMUST00000115519,ENSMUST00000115521,ENSMUST00000151758,ENSMUST00000153390_5end
|EntrezGene=15893
|EntrezGene=15893
|HGNC=
|HGNC=
|UniProt=D3Z118,E9QMF8,P97411,D3Z699,D3Z376
|UniProt=D3Z118,E9QMF8,P97411,D3Z699,D3Z376
|association_with_transcript=0bp_to_ENSMUST00000115519,ENSMUST00000115521,ENSMUST00000151758,ENSMUST00000153390_5end
|description=CAGE_peak_1_at_Ica1_5end
|id=chr6:8728106..8728162,-
|ontology_enrichment_disease=
|phase1_expression=17.7765220286321,2.44282785347553,0.909998478779072,0.90739263392049,0,16.2842893754533,13.0823078733494,0.645616617207881,0,0,0,0,0,0,2.99798785634096,3.64455481301687,5.59649502502517,0.315462165358238,0.274228867211478,0,21.6009956983717,0,0,6.07971206614945,5.73523202667925,1.72269589234506,4.30761996159075,7.32602191132023,7.22088993934221,7.05684363327806,11.9734475753865,22.2260735710871,17.221814052368,0,11.2652131702997,14.2961795008303,12.0459920194798,50.2237956884289,30.4720784364282,83.2402752918339,79.9994823722179,79.2332762551797,101.957174136542,10.0717454380462,11.6583470902442,8.44315059943735,1.56478268869608,1.96222640742402,0.878744730937887,0.777719596297134,1.25987779462826,1.43752564364972,0.167782606057736,0,0,2.57259436035947,3.72493471920384,5.15672092277442,14.3644687210314,10.5798195854407,17.747279298173,0.677689064138264,0,4.94944844504769,3.9554654502679,4.9733608046227,0.599200221036809,1.15265491596466,9.22837549545451,10.2604513132085,12.6194976810829,13.9968982357864,14.5773237028065,11.3916443269907,8.14686503655009,11.0306254393203,42.9451935897616,35.1140179734266,32.1037654505549,12.5291973343684,17.3826522844578,14.5855743755893,25.4056529091257,33.7657566019008,28.1148775909331,23.2756582524197,29.8980529678116,23.1135312823373,0.984440513331393,1.73814588245607,72.4661221754194,23.2314446784974,3.39985666853875,0.539703191637817,2.59910566979068,2.68816132258401,12.3591089715942,0,0,0,17.7462708918617,0,0,0,8.01016851741492,10.8944742154292,13.1436355703844,9.1347103775248,14.7594593678888,31.7666177598725,11.2765462397988,11.8741536541735,13.8369298353635,17.7852715852095,15.0513545133702,25.8873178139131,9.64060374164058,8.53136205827479,32.7305904221453,7.92657564742305,7.06692859073259,10.6672555689749,16.775258509631,47.1377083188591,37.281513812795,11.7510245395952,17.1335628043466,17.9970819298022,14.1047952051102,43.7388667062082,53.0700699269607,22.4921290282027,66.0532416730651,65.2074416192343,34.0772393077679,50.1325502879371,7.33243419722277,13.0627319140598,29.5685627367399,10.7325346502102,13.2722851821958,8.96618207290544,7.20248519221397,6.93242162044289,6.46346741937615,7.94305065766069,7.40243624021858,13.1938719076898,6.25147179505242,11.535470890237,10.7330185740009,8.11024209982027,10.8438427197983,6.268538997399,6.58502836505419,6.17006227137329,31.5995934290956,24.7053990830127,12.7873574728017,20.9197030260857,19.7001890384121,18.7264543919455,17.7558551688908,19.2828947112456,14.5011086114136,9.99895962426754,15.8281306825775,17.2812706703411,17.114224391002,17.8942535846214,17.1865876237214,16.0819986167866,16.6858087621198,18.2520729514106,57.4091559580067,26.034866931959,6.27795687669216,3.96675849995316,7.03851226766272,7.89604684325491,9.79392706047909,11.6976444281539,7.33847544688072,5.89699440948933,9.96511029243474,8.72904460037258,11.0587491872119,8.75408476981064,9.74820435595601,7.19055526923377,13.1844210423563,12.1476176685164,7.39704813717019,9.48262654660749,12.3978509240388,14.255592949172,13.5766741017338,15.5000161957604,17.706230394792,13.1373031701846,16.4848664233444,14.0672766870853,5.63259991465583,6.00642380577939,5.11053387294328,3.14806957338795,5.47722327748958,7.71766911207734,8.65727896056827,13.2340223227373,9.24170792617702,7.4131581560782,8.62609239164127,8.93138274404408,9.36113019343682,5.30415643688935,6.09951205974501,4.82443521363367,37.6896507939874,13.0749074121634,20.5335870316953,19.0114496068211,17.8364588699262,22.9483572695288,34.278284287586,32.1970518965368,35.3102722797868,34.9914209645064,33.4855014180723,39.9826487906401,35.9184762281063,41.9482269886384,3.01582567878545,2.17562273527484,57.5364199432272,64.0173251426979,44.9541651965817,38.093798142466,0.327869890753351,7.32165688892682,8.20321370482267,9.37052986311932,9.47862950024315,5.4962823529087,9.35754431146055,5.94460714656548,8.50102473517278,11.6902343164525,15.8115111178609,52.0540532603327,11.071326646245,5.34196811001766,8.95878276444668,16.0021019283359,100.886305138372,12.867373716214,24.4882081141448,59.9764153623756,66.1476240052931,64.2539459202808,38.7642439752332,47.9864522910307,52.405114622554,90.0704760117076,85.389072945749,78.383012868622,46.2997863825152,9.90336017172206,10.0899773350549,16.5039516974326,23.5862510744224,16.4099312193905,23.5305099461033,25.5750557256263,7.27482294997502,18.6412222360162,84.2418480569955,6.43056386471772,8.39615018818709,5.1869115438214,4.65552141612232,4.59594519286172,10.2018292820448,36.1579338920494,8.88528580148834,12.7959858137198,10.3708935327039,10.360265135258,5.05768642567793,6.40578884978263,30.9360742588817,36.9471834134457,30.2657942631688,35.3228128665592,5.21954389408873,14.84232110026,16.308806464092,12.5452977608681,22.9280691933486,22.6572101926499,24.8786901733261,26.175594198403,9.85073797017626,142.286702696906,1.12738587736838,6.13017838780313,3.97100377097034,5.63908446197738,4.77891346867605,5.23763989021412,5.16371850041317,7.03103678157331,10.5907937869968,6.28118714147616,5.18454011264158,1.26404448251271,4.86540516696394,5.13554785824136,2.46849563657811,2.8644271306797,3.77494574084403,2.04332264183947,1.47689527174577,2.3222283488074,1.06689529317,1.00826185136841,1.46186821109629,1.34696578296461,1.5193997283604,8.38902419376282,6.43759264784788,1.52513556236109,3.02192309455341,27.2397327585389,15.9530104133505,15.9341913112521,3.42989406526505,116.86630024024,68.3349729566651,67.2074845300478,72.184834693364,47.2596251445141,78.0994072538532,69.4962385598524,62.1020700213261,69.7997864997542,78.3936367542674,73.0042039570066,5.81209146471389,11.1726964552289,9.90254913373978,11.9122291363464,10.4806581313991,7.72142735490059,12.6680634846921,13.1862436632892,13.4786068028562,12.8875577999537,12.4204856946217,13.0152175556393,10.3005658216871,11.8446531949008,10.4532553499216,12.3836359733599,11.4725482685407,12.1532808892134,11.1263193216893,11.0399190100798,10.2860775715625,13.665637074269,11.921809497366,12.3544454137479,13.3635320189769,13.5383372626682,11.7073902638574,13.6796249947678,14.5310401815072,16.2731258780744,12.2194068667899,10.145961684683,14.3230865109391,11.3103894065755,10.4169569929816,12.9901500527732,12.3983752476066,12.247650080753,8.99055160723564,9.48543102213917,14.1439379728457
|phase1_expression=17.7765220286321,2.44282785347553,0.909998478779072,0.90739263392049,0,16.2842893754533,13.0823078733494,0.645616617207881,0,0,0,0,0,0,2.99798785634096,3.64455481301687,5.59649502502517,0.315462165358238,0.274228867211478,0,21.6009956983717,0,0,6.07971206614945,5.73523202667925,1.72269589234506,4.30761996159075,7.32602191132023,7.22088993934221,7.05684363327806,11.9734475753865,22.2260735710871,17.221814052368,0,11.2652131702997,14.2961795008303,12.0459920194798,50.2237956884289,30.4720784364282,83.2402752918339,79.9994823722179,79.2332762551797,101.957174136542,10.0717454380462,11.6583470902442,8.44315059943735,1.56478268869608,1.96222640742402,0.878744730937887,0.777719596297134,1.25987779462826,1.43752564364972,0.167782606057736,0,0,2.57259436035947,3.72493471920384,5.15672092277442,14.3644687210314,10.5798195854407,17.747279298173,0.677689064138264,0,4.94944844504769,3.9554654502679,4.9733608046227,0.599200221036809,1.15265491596466,9.22837549545451,10.2604513132085,12.6194976810829,13.9968982357864,14.5773237028065,11.3916443269907,8.14686503655009,11.0306254393203,42.9451935897616,35.1140179734266,32.1037654505549,12.5291973343684,17.3826522844578,14.5855743755893,25.4056529091257,33.7657566019008,28.1148775909331,23.2756582524197,29.8980529678116,23.1135312823373,0.984440513331393,1.73814588245607,72.4661221754194,23.2314446784974,3.39985666853875,0.539703191637817,2.59910566979068,2.68816132258401,12.3591089715942,0,0,0,17.7462708918617,0,0,0,8.01016851741492,10.8944742154292,13.1436355703844,9.1347103775248,14.7594593678888,31.7666177598725,11.2765462397988,11.8741536541735,13.8369298353635,17.7852715852095,15.0513545133702,25.8873178139131,9.64060374164058,8.53136205827479,32.7305904221453,7.92657564742305,7.06692859073259,10.6672555689749,16.775258509631,47.1377083188591,37.281513812795,11.7510245395952,17.1335628043466,17.9970819298022,14.1047952051102,43.7388667062082,53.0700699269607,22.4921290282027,66.0532416730651,65.2074416192343,34.0772393077679,50.1325502879371,7.33243419722277,13.0627319140598,29.5685627367399,10.7325346502102,13.2722851821958,8.96618207290544,7.20248519221397,6.93242162044289,6.46346741937615,7.94305065766069,7.40243624021858,13.1938719076898,6.25147179505242,11.535470890237,10.7330185740009,8.11024209982027,10.8438427197983,6.268538997399,6.58502836505419,6.17006227137329,31.5995934290956,24.7053990830127,12.7873574728017,20.9197030260857,19.7001890384121,18.7264543919455,17.7558551688908,19.2828947112456,14.5011086114136,9.99895962426754,15.8281306825775,17.2812706703411,17.114224391002,17.8942535846214,17.1865876237214,16.0819986167866,16.6858087621198,18.2520729514106,57.4091559580067,26.034866931959,6.27795687669216,3.96675849995316,7.03851226766272,7.89604684325491,9.79392706047909,11.6976444281539,7.33847544688072,5.89699440948933,9.96511029243474,8.72904460037258,11.0587491872119,8.75408476981064,9.74820435595601,7.19055526923377,13.1844210423563,12.1476176685164,7.39704813717019,9.48262654660749,12.3978509240388,14.255592949172,13.5766741017338,15.5000161957604,17.706230394792,13.1373031701846,16.4848664233444,14.0672766870853,5.63259991465583,6.00642380577939,5.11053387294328,3.14806957338795,5.47722327748958,7.71766911207734,8.65727896056827,13.2340223227373,9.24170792617702,7.4131581560782,8.62609239164127,8.93138274404408,9.36113019343682,5.30415643688935,6.09951205974501,4.82443521363367,37.6896507939874,13.0749074121634,20.5335870316953,19.0114496068211,17.8364588699262,22.9483572695288,34.278284287586,32.1970518965368,35.3102722797868,34.9914209645064,33.4855014180723,39.9826487906401,35.9184762281063,41.9482269886384,3.01582567878545,2.17562273527484,57.5364199432272,64.0173251426979,44.9541651965817,38.093798142466,0.327869890753351,7.32165688892682,8.20321370482267,9.37052986311932,9.47862950024315,5.4962823529087,9.35754431146055,5.94460714656548,8.50102473517278,11.6902343164525,15.8115111178609,52.0540532603327,11.071326646245,5.34196811001766,8.95878276444668,16.0021019283359,100.886305138372,12.867373716214,24.4882081141448,59.9764153623756,66.1476240052931,64.2539459202808,38.7642439752332,47.9864522910307,52.405114622554,90.0704760117076,85.389072945749,78.383012868622,46.2997863825152,9.90336017172206,10.0899773350549,16.5039516974326,23.5862510744224,16.4099312193905,23.5305099461033,25.5750557256263,7.27482294997502,18.6412222360162,84.2418480569955,6.43056386471772,8.39615018818709,5.1869115438214,4.65552141612232,4.59594519286172,10.2018292820448,36.1579338920494,8.88528580148834,12.7959858137198,10.3708935327039,10.360265135258,5.05768642567793,6.40578884978263,30.9360742588817,36.9471834134457,30.2657942631688,35.3228128665592,5.21954389408873,14.84232110026,16.308806464092,12.5452977608681,22.9280691933486,22.6572101926499,24.8786901733261,26.175594198403,9.85073797017626,142.286702696906,1.12738587736838,6.13017838780313,3.97100377097034,5.63908446197738,4.77891346867605,5.23763989021412,5.16371850041317,7.03103678157331,10.5907937869968,6.28118714147616,5.18454011264158,1.26404448251271,4.86540516696394,5.13554785824136,2.46849563657811,2.8644271306797,3.77494574084403,2.04332264183947,1.47689527174577,2.3222283488074,1.06689529317,1.00826185136841,1.46186821109629,1.34696578296461,1.5193997283604,8.38902419376282,6.43759264784788,1.52513556236109,3.02192309455341,27.2397327585389,15.9530104133505,15.9341913112521,3.42989406526505,116.86630024024,68.3349729566651,67.2074845300478,72.184834693364,47.2596251445141,78.0994072538532,69.4962385598524,62.1020700213261,69.7997864997542,78.3936367542674,73.0042039570066,5.81209146471389,11.1726964552289,9.90254913373978,11.9122291363464,10.4806581313991,7.72142735490059,12.6680634846921,13.1862436632892,13.4786068028562,12.8875577999537,12.4204856946217,13.0152175556393,10.3005658216871,11.8446531949008,10.4532553499216,12.3836359733599,11.4725482685407,12.1532808892134,11.1263193216893,11.0399190100798,10.2860775715625,13.665637074269,11.921809497366,12.3544454137479,13.3635320189769,13.5383372626682,11.7073902638574,13.6796249947678,14.5310401815072,16.2731258780744,12.2194068667899,10.145961684683,14.3230865109391,11.3103894065755,10.4169569929816,12.9901500527732,12.3983752476066,12.247650080753,8.99055160723564,9.48543102213917,14.1439379728457
|short_description=p1@Ica1
}}
}}

Revision as of 20:57, 18 April 2012

Short description:p1@Ica1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ica1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000115519, ENSMUST00000115521, ENSMUST00000151758, ENSMUST00000153390_5end
EntrezGene:Ica1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ica1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.08
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I27.33
Ileum epithelium, pool1.CNhs13199.10252-104B97.22
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G617.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F511.27
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.05
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G850.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H130.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H383.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G980.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H279.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4101.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C314.36
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.23
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.28
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.11
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F91.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G372.47
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G313.14
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H914.76
adrenal gland, adult.CNhs10508.49-24D731.77
adrenal gland, embryo E14.CNhs11038.406-44C511.28
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I113.84
adrenal gland, embryo E18.CNhs11026.1262-18F517.79
adrenal gland, neonate N00.CNhs11191.1311-23C115.05
adrenal gland, neonate N25.CNhs11223.1377-27I325.89
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G232.73
bone (os femoris), neonate N02.CNhs11227.1985-43F57.93
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B247.14
cerebellum, neonate N30.CNhs11135.1395-42I237.28
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.13
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D414.10
corpora quadrigemina, adult.CNhs10501.16-22A443.74
corpus striatum, adult.CNhs10487.19-21D853.07
corpus striatum, neonate N00.CNhs11226.630-43F122.49
cortex, adult.CNhs10473.12-14D566.05
cortex, neonate N30.CNhs11107.1392-42F265.21
diencephalon, adult.CNhs10482.20-12F234.08
diencephalon, neonate N30.CNhs11201.1388-42B250.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.06
epididymis, adult.CNhs10490.58-23B229.57
eyeball, adult.CNhs10484.31-12G410.73
eyeball, embryo E12.CNhs11016.345-16C613.27
eyeball, embryo E14.CNhs10521.399-16E28.97
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C66.46
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G87.40
eyeball, neonate N16.CNhs11188.777-19A213.19
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C831.60
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.71
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E920.92
heart, embryo E12.CNhs11015.353-12F519.70
heart, embryo E13.CNhs11013.376-3I918.73
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C819.28
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G315.83
heart, neonate N00.CNhs11213.639-21E317.28
heart, neonate N03.CNhs11221.1349-25I217.11
heart, neonate N10.CNhs11118.749-24G117.89
heart, neonate N16.CNhs11209.782-15G117.19
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D316.69
heart, neonate N30.CNhs11202.1390-42D218.25
hippocampus, adult.CNhs10478.13-16E857.41
hippocampus, neonate N00.CNhs11228.627-43G126.03
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D89.79
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E98.73
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G112.15
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C713.58
kidney, neonate N00.CNhs11214.646-21G715.50
kidney, neonate N10.CNhs11206.758-6D517.71
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H114.07
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A38.66
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F49.24
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H16.10
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B137.69
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F820.53
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B617.84
lung, embryo E17.CNhs10605.480-44A622.95
lung, embryo E18.CNhs10583.1287-20I634.28
lung, neonate N00.CNhs11224.640-42C632.20
lung, neonate N06.CNhs11212.683-20E535.31
lung, neonate N07.CNhs11111.715-19A334.99
lung, neonate N10.CNhs11219.750-23E633.49
lung, neonate N20.CNhs11109.822-18A439.98
lung, neonate N25.CNhs11119.1359-25C735.92
lung, neonate N30.CNhs11133.1394-42H241.95
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B657.54
mammary gland, adult pregnant day19.CNhs10476.588-5H264.02
medulla oblongata, adult.CNhs10477.17-12C244.95
medulla oblongata, neonate N30.CNhs11200.1396-42A338.09
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.48
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I952.05
ovary, adult.CNhs10507.91-2I711.07
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I48.96
oviduct, adult pregnant day01.CNhs10500.988-6G616.00
pancreas, adult.CNhs10486.34-16E4100.89
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F224.49
pancreas, embryo E16.CNhs11003.460-26E559.98
pancreas, embryo E17.CNhs10599.1558-45G366.15
pancreas, embryo E18.CNhs10580.1535-43I764.25
pancreas, neonate N00.CNhs11105.645-26G938.76
pancreas, neonate N01.CNhs11138.1531-43D747.99
pancreas, neonate N02.CNhs11139.1539-43D852.41
pancreas, neonate N16.CNhs11136.787-43B690.07
pancreas, neonate N25.CNhs11094.1555-45E285.39
pancreas, neonate N30.CNhs11182.1548-44H578.38
pituitary gland, adult.CNhs10493.21-1G846.30
pituitary gland, embryo E12.CNhs11018.346-16E69.90
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A516.50
pituitary gland, embryo E15.CNhs10592.427-16B923.59
pituitary gland, embryo E16.CNhs11036.449-43F616.41
pituitary gland, embryo E17.CNhs11039.1265-44F523.53
pituitary gland, neonate N00.CNhs11190.1308-22E925.58
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G318.64
prostate, adult.CNhs10470.859-1F884.24
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G48.40
skin, neonate N03.CNhs11215.662-22H35.19
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C44.60
small intestine, neonate N16.CNhs11114.790-21I110.20
spinal cord, adult.CNhs10505.24-13C936.16
spleen, adult.CNhs10465.25-2G28.89
spleen, embryo E16.CNhs11035.461-43C112.80
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D330.27
stomach, adult.CNhs10503.33-1H635.32
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D416.31
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C622.93
stomach, neonate N03.CNhs11193.1340-24B822.66
stomach, neonate N07.CNhs11210.718-18A924.88
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I19.85
submandibular gland, adult.CNhs10469.59-29C1142.29
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D910.59
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.35
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.02
urinary bladder, adult.CNhs10481.879-12E427.24
uterus, adult pregnant day19.CNhs10497.590-15F515.95
uterus, adult.CNhs10509.92-27E515.93
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F8116.87
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A168.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A267.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A372.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A569.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A662.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A769.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A878.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A973.00
whole body, embryo E11.CNhs11014.324-5I85.81
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D211.91
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.47
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C212.25
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:8728106..8728162,-&oldid=953509"