FFCP PHASE1:Mm9::chr7:106416848..106416898,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17760 | |EntrezGene=17760 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1818 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TSJ2 | |UniProt=Q7TSJ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000107100,NM_001043355_5end | |association_with_transcript=0bp_to_ENSMUST00000107100,NM_001043355_5end | ||
|cluster_id=chr7:106416848..106416898,+ | |||
|description=CAGE_peak_2_at_Mtap6_5end | |description=CAGE_peak_2_at_Mtap6_5end | ||
|id=chr7:106416848..106416898,+ | |id=chr7:106416848..106416898,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.23e-15!50;CL:0000221!4.40e-12!44;CL:0000133!4.40e-12!44;CL:0002319!4.54e-12!43;CL:0000393!1.09e-09!39;CL:0000211!1.09e-09!39;CL:0000333!9.13e-08!10;CL:0000095!9.13e-08!10;CL:0000243!9.13e-08!10;CL:0000123!9.13e-08!10;CL:0000125!9.13e-08!10;CL:0000030!9.13e-08!10;CL:0000339!9.13e-08!10 | |ontology_enrichment_celltype=CL:0000055!6.23e-15!50;CL:0000221!4.40e-12!44;CL:0000133!4.40e-12!44;CL:0002319!4.54e-12!43;CL:0000393!1.09e-09!39;CL:0000211!1.09e-09!39;CL:0000333!9.13e-08!10;CL:0000095!9.13e-08!10;CL:0000243!9.13e-08!10;CL:0000123!9.13e-08!10;CL:0000125!9.13e-08!10;CL:0000030!9.13e-08!10;CL:0000339!9.13e-08!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.70e-12,44;CL:0000133,2.70e-12,44;CL:0002319,2.79e-12,43;CL:0000393,7.50e-10,39;CL:0000211,7.50e-10,39;CL:0000333,6.84e-08,10;CL:0000095,6.84e-08,10;CL:0000243,6.84e-08,10;CL:0000123,6.84e-08,10;CL:0000125,6.84e-08,10;CL:0000030,6.84e-08,10;CL:0000339,6.84e-08,10;CL:0002321,7.53e-07,70;CL:0000540,9.69e-07,33;CL:0000047,9.69e-07,33;CL:0000031,9.69e-07,33;CL:0000404,9.69e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.36e-24!102;UBERON:0000924!8.36e-24!102;UBERON:0006601!8.36e-24!102;UBERON:0000073!7.61e-18!75;UBERON:0001016!7.61e-18!75;UBERON:0001017!1.58e-16!73;UBERON:0005743!1.58e-16!73;UBERON:0002346!1.57e-12!71;UBERON:0003075!1.57e-12!71;UBERON:0007284!1.57e-12!71;UBERON:0000033!2.17e-12!63;UBERON:0000955!1.11e-09!50;UBERON:0006238!1.11e-09!50;UBERON:0001049!1.20e-09!52;UBERON:0005068!1.20e-09!52;UBERON:0006241!1.20e-09!52;UBERON:0007135!1.20e-09!52;UBERON:0002616!1.66e-09!49;UBERON:0003056!7.54e-09!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.72e-24,95;UBERON:0000924,2.72e-24,95;UBERON:0006601,2.72e-24,95;UBERON:0001016,3.58e-18,75;UBERON:0001017,7.92e-17,73;UBERON:0010371,3.54e-14,73;UBERON:0002346,7.81e-13,64;UBERON:0003075,7.81e-13,64;UBERON:0007284,7.81e-13,64;UBERON:0010314,1.20e-12,92;UBERON:0000073,2.20e-10,54;UBERON:0001049,8.28e-10,52;UBERON:0005068,8.28e-10,52;UBERON:0006241,8.28e-10,52;UBERON:0007135,8.28e-10,52;UBERON:0003056,5.38e-09,49;UBERON:0000955,7.11e-09,47;UBERON:0006238,7.11e-09,47;UBERON:0002616,1.06e-08,46 | |||
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| ||
|short_description=p2@Mtap6 | |short_description=p2@Mtap6 | ||
}} | }} |
Latest revision as of 14:10, 25 September 2015
Short description: | p2@Mtap6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mtap6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1818 |
Association with transcript: | 0bp_to_ENSMUST00000107100, NM_001043355_5end |
EntrezGene: | Mtap6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.70e-12 | 44 |
neurectodermal cell | 2.70e-12 | 44 |
neural cell | 2.79e-12 | 43 |
electrically responsive cell | 7.50e-10 | 39 |
electrically active cell | 7.50e-10 | 39 |
migratory neural crest cell | 6.84e-08 | 10 |
neuron associated cell | 6.84e-08 | 10 |
glial cell (sensu Vertebrata) | 6.84e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.84e-08 | 10 |
glial cell | 6.84e-08 | 10 |
glioblast | 6.84e-08 | 10 |
glioblast (sensu Vertebrata) | 6.84e-08 | 10 |
embryonic cell | 7.53e-07 | 70 |
neuron | 9.69e-07 | 33 |
neuronal stem cell | 9.69e-07 | 33 |
neuroblast | 9.69e-07 | 33 |
electrically signaling cell | 9.69e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.72e-24 | 95 |
ectoderm | 2.72e-24 | 95 |
presumptive ectoderm | 2.72e-24 | 95 |
nervous system | 3.58e-18 | 75 |
central nervous system | 7.92e-17 | 73 |
ecto-epithelium | 3.54e-14 | 73 |
neurectoderm | 7.81e-13 | 64 |
neural plate | 7.81e-13 | 64 |
presumptive neural plate | 7.81e-13 | 64 |
structure with developmental contribution from neural crest | 1.20e-12 | 92 |
regional part of nervous system | 2.20e-10 | 54 |
neural tube | 8.28e-10 | 52 |
neural rod | 8.28e-10 | 52 |
future spinal cord | 8.28e-10 | 52 |
neural keel | 8.28e-10 | 52 |
pre-chordal neural plate | 5.38e-09 | 49 |
brain | 7.11e-09 | 47 |
future brain | 7.11e-09 | 47 |
regional part of brain | 1.06e-08 | 46 |